The DOI matches its Crossref record; 50 of the 51 references it cites were found in a registry or an index.
Yeast metabolic engineering for hemicellulosic ethanol production
Abstract
Efficient fermentation of hemicellulosic sugars is critical for the bioconversion of lignocellulosics to ethanol. Efficient sugar uptake through the heterologous expression of yeast and fungal xylose/glucose transporters can improve fermentation if other metabolic steps are not rate limiting. Rectification of cofactor imbalances through heterologous expression of fungal xylose isomerase or modification of cofactor requirements in the yeast oxidoreductase pathway can reduce xylitol production while increasing ethanol yields, but these changes often occur at the expense of xylose utilization rates. Genetic engineering and evolutionary adaptation to increase glycolytic flux coupled with transcriptomic and proteomic studies have identified targets for further modification, as have genomic and metabolic engineering studies in native xylose fermenting yeasts.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Brennan et al. have devised an extraction method for glucose and xylose recovery from [C 2 C 1 im][MeCO 2 ] using boronates such as naphthalene-2-boronate.”
From Deconstruction of lignocellulosic biomass with ionic liquids (2013) · cites this paper as [182]
Citations
Cites
Towards industrial pentose-fermenting yeast strains
Hahn‐Hägerdal, B., Karhumaa, K., Fonseca, C., Spencer‐Martins, I., & Gorwa‐Grauslund, M. F. (2007) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-006-0827-2 · Cited by 784
Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis
Jeffries, T. W., Grigoriev, I. V., Grimwood, J., Laplaza, J. M., Aerts, A. L., Salamov, A. A., Schmutz, J., Lindquist, E., Dehal, P., Shapiro, H., et al. (2007) · Nature Biotechnology · doi:10.1038/nbt1290 · Cited by 492
Self-citationKarhumaa, K., Sánchez, R. G., Hahn‐Hägerdal, B., & Gorwa‐Grauslund, M. F. (2007) · Microbial Cell Factories · doi:10.1186/1475-2859-6-5 · Cited by 292
Metabolic Engineering for Pentose Utilization in Saccharomyces cerevisiae
Hahn‐Hägerdal, B., Karhumaa, K., Jeppsson, M., & Gorwa‐Grauslund, M. F. (2007) · Springer eBooks · doi:10.1007/10_2007_062 · Cited by 280
Rapid whole-genome mutational profiling using next-generation sequencing technologiesPreprint
Smith, D. R., Quinlan, A. R., Peckham, H. E., Makowsky, K., Tao, W., Woolf, B., Shen, L., Donahue, W. F., Tusneem, N. A., Strömberg, M. P., et al. (2008) · Genome Research · doi:10.1101/gr.077776.108 · Cited by 260
Self-citationWisselink, H. W., Toirkens, M. J., Wu, Q., Pronk, J. T., & van Maris, A. J. A. (2009) · Applied and Environmental Microbiology · doi:10.1128/aem.02268-08 · Cited by 247
van Maris, A. J. A., Winkler, A. A., Kuyper, M., de Laat, W. T. A. M., van Dijken, J. P., & Pronk, J. T. (2007) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2007_057 · Cited by 245
Saloheimo, A., Rauta, J., Stasyk, O. V., Sibirny, A. А., Penttilä, M. E., & Ruohonen, L. (2006) · Applied Microbiology and Biotechnology · doi:10.1007/s00253-006-0747-1 · Cited by 210
Watanabe, S., Kodaki, T., & Makino, K. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m409443200 · Cited by 195
Watanabe, S., Saleh, A. A., Pack, S. P., Annaluru, N., Kodaki, T., & Makino, K. (2007) · Microbiology · doi:10.1099/mic.0.2007/007856-0 · Cited by 189
Flagged first, then by citations
1 of the 51 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Items 201–239 of 239
Remaining Challenges in the Metabolic Engineering of Yeasts for Biofuels
Lee, S., Young, E. M., & Alper, H. S. (2015) · Elsevier eBooks · doi:10.1016/b978-0-444-59592-8.00012-9 · Cited by 2
Ethanol Production from Yeasts
Hasunuma, T., Yamada, R., & Kondo, A. (2014) · Wiley eBooks · doi:10.1002/9781118845394.ch8 · Cited by 2
Production of D-xylonate and organic acid tolerance in yeast
Nygård, Y. (2014) · Aaltodoc (Aalto University) · Cited by 2
Correia, K., Khusnutdinova, A. N., Li, P. Y., Joo, J. C., Brown, G., Yakunin, A. F., & Mahadevan, R. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/390401 · Cited by 2
Li, C., Yu, H., Chen, S., Song, L., Ai, Y., Wei, F., Sun, D., Wang, M., Xu, L., He, D., et al. (2025) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.4c12275 · Cited by 1
Cortivo, P. R. D., Hickert, L. R., Rosa, C. A., & Ayub, M. A. Z. (2022) · Biomass Conversion and Biorefinery · doi:10.1007/s13399-022-02531-z · Cited by 1
Tombolato, G. G., Castoldi, R., de Souza, C. G. M., & Peralta, R. M. (2020) · Ciência, Tecnologia e Inovação: do campo à mesa · doi:10.31692/iciagro.2020.0415 · Cited by 1
Park, J. M., Park, D. J., Chung, B., & Min, J. (2013) · Biotechnology and Bioprocess Engineering · doi:10.1007/s12257-012-0669-y · Cited by 1
Energy Production: Biomass – Starch, Cellulose, and Hemicellulose
Kuroda, K. (2019) · Springer eBooks · doi:10.1007/978-981-13-5868-5_2 · Cited by 1
ETANOL 1,5G: UMA DISCUSSÃO SOBRE A INTEGRAÇÃO ENTRE O ETANOL DE PRIMEIRA E SEGUNDA GERAÇÃO
Zart, V. P. M., Souza, C., Peralta, R. M., & Castoldi, R. (2020) · Instituto Internacional Despertando Vocações eBooks · doi:10.31692/978-65-88970-02-7.v.1.356-374 · Cited by 1
Synthetic Biology in the Candida (CTG) Clade
Kasir, D., Besseau, S., Clastre, M., Oudin, A., Hamzé, M., Courdavault, V., Osman, M., & Papon, N. (2022) · Springer eBooks · doi:10.1007/978-3-030-89680-5_12 · Cited by 1
A Microbial Perspective on Ethanolic Lignocellulose Fermentation
Parachin, N. S., Hahn‐Hägerdal, B., & Bettiga, M. (2011) · Elsevier eBooks · doi:10.1016/b978-0-444-64046-8.00379-7 · Cited by 1
Fermentation I – Microorganisms
Amarasekara, A. S. (2013) · Wiley eBooks · doi:10.1002/9781118878750.ch8
Temperature optimization for bioethanol production from corn cobs.
Yah, C. S., Iyuke, S. E., Unuabonah, E. I., Pillay, O., Vishant, C., & Tessa, S. M. (2010)
Bioconversion of plant residues into ethanol
Gupta, R. (2012) · INFLIBNET
Improving robustness and metabolic profile of saccharomyces cerevisiae for industrial bioprocesses
Bertagnoli, S. (2011) · BOA (University of Milano-Bicocca)
Metabolic Engineering of Saccharomyces cerevisiae for Sesquiterpene Production
Scalcinati, G. (2012) · Chalmers Publication Library (Chalmers University of Technology)
[Progress in inverse metabolic engineering].
Li, G., Zhang, X., Wang, Z., Shi, Y., Chen, T., & Zhao, X. (2014) · PubMed
Malán, A. K., Fagúndez, A., Gill, P. R., & Batista, S. B. (2016) · Springer eBooks · doi:10.1007/978-981-10-2555-6_3
Developing a synthetic yeast for the expression of heterologous genes using SCRaMbLE
Jovicevic, D. (2016) · Spiral (Imperial College London) · doi:10.25560/60854
(2010) · Yeast · doi:10.1002/yea.1714
(2012) · Wiley eBooks · doi:10.1002/9781118414514.refs
Data of the crystal structure of xylose isomerase from Streptomyces avermitilis
Nam, K. H. (2025) · Data in Brief · doi:10.1016/j.dib.2025.111414
A synthetic positive feedback based gene regulatory circuit
Nistala, G. J. (2011) · Illinois Digital Environment for Access to Learning and Scholarship (University of Illinois at Urbana-Champaign)
Models and algorithms for investigating and exploiting the metabolism of microorganisms
Ziska, I. (2020) · theses.fr (ABES) · doi:10.70675/c33d1111z7e28z4809z88a7zea0485a6058f
Engineered Microbial Strains for Co-fermentation of C5 and C6 Sugars to Produce Cellulosic Ethanol
Nasuno, R., Xie, C.-Y., Kawahara, Y., Tang, Y., & Hasunuma, T. (2026) · Advances in biochemical engineering, biotechnology · doi:10.1007/10_2026_319
Metadata
- Authors
- Van Vleet, J., & Jeffries, T.
- Venue
- Current Opinion in Biotechnology
- Publisher
- Elsevier BV
- Published
- 2009-06
- Volume
- 20
- Issue
- 3
- Pages
- 300-306
- ISSN
- 0958-1669 (ISSN-L)
- OpenAlex
- W2068003115
- Cited by
- 241
- References
- 51
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 4 · 2023: 4 · 2022: 5 · 2021: 6 · 2020: 15 · 2019: 6 · 2018: 15 · 2017: 15 · 2016: 21 · 2015: 9 · 2014: 26 · 2013: 25 · 2012: 34
- FWCI
- 2.52
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Current Opinion in Biotechnology (publishedVersion)
- PubMed (publishedVersion)
- Funders
- U.S. Department of Energy
- U.S. Department of Agriculture
- Topics
- Physical Sciences › Engineering › Biomedical Engineering › Biofuel production and bioconversion
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Microbial Metabolic Engineering and Bioproduction
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Keywords
- yeast metabolic engineering, xylose fermentation, xylose transporters, xylose isomerase, xylitol production, lignocellulosic biomass, glycolytic flux, xylose-fermenting yeast, heterologous expression
- MeSH terms
- Ethanol, Aldehyde Reductase, Pichia, Polysaccharides, Xylose, Yeasts, Protein Engineering, Aldose-Ketose Isomerases, D-Xylulose Reductase
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review