Recent Progress of Molecular Mechanisms of DNA Methylation in Plant Response to Abiotic Stress

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

Law, J. A., & Jacobsen, S. E. (2010) · Nature Reviews Genetics · doi:10.1038/nrg2719 · Cited by 3,868 · see citing works

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

Cokus, S. J., Feng, S.-H., Zhang, X.-Y., Chen, Z., Merriman, B., Haudenschild, C., Pradhan, S., Nelson, S., Pellegrini, M., & Jacobsen, S. (2008) · Nature · doi:10.1038/nature06745 · Cited by 2,278 · see citing works

Abiotic and biotic stress combinations

Suzuki, N., Rivero, R. M., Shulaev, V., Blumwald, E., & Mittler, R. (2014) · New Phytologist · doi:10.1111/nph.12797 · Cited by 2,153 · see citing works

Target mimicry provides a new mechanism for regulation of microRNA activity

Franco‐Zorrilla, J. M., Valli, A. A., Todesco, M., Mateos, I., Puga, M. I., Rubio‐Somoza, I., Leyva, A., Weigel, D., Garcı́a, J. A., & Paz‐Ares, J. (2007) · Nature Genetics · doi:10.1038/ng2079 · Cited by 2,074 · see citing works

Heavy metal hyperaccumulating plants: how and why do they do it? And what makes them so interesting

Rascio, N., & Navari-Izzo, F. (2011) · Plant Science · doi:10.1016/j.plantsci.2010.08.016 · Cited by 2,012 · see citing works

Genome-wide High-Resolution Mapping and Functional Analysis of DNA Methylation in Arabidopsis

Zhang, X., Yazaki, J., Sundaresan, A., Cokus, S. J., Chan, S. W.-L., Chen, H., Henderson, I. R., Shinn, P., Pellegrini, M. A., Jacobsen, S. E., et al. (2006) · Cell · doi:10.1016/j.cell.2006.08.003 · Cited by 1,818 · see citing works

Cellular Mechanisms of Aluminum Toxicity and Resistance in Plants

Kochian, L. V. (1995) · Annual Review of Plant Physiology and Plant Molecular Biology · doi:10.1146/annurev.pp.46.060195.001321 · Cited by 1,689 · see citing works

Plant hormone regulation of abiotic stress responses

Waadt, R., Seller, C. A., Hsu, P., Takahashi, Y., Munemasa, S., & Schroeder, J. I. (2022) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-022-00479-6 · Cited by 1,426 · see citing works

A genome-wide transcriptional analysis using Arabidopsis thaliana Affymetrix gene chips determined plant responses to phosphate deprivation

Misson, J., Raghothama, K. G., Jain, A., Jouhet, J., Block, M. A., Bligny, R., Ortet, P., Creff, A., Somerville, S. C., Rolland, N., et al. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0505266102 · Cited by 862 · see citing works

Signaling Network in Sensing Phosphate Availability in Plants

Chiou, T., & Lin, S.-I. (2011) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-042110-103849 · Cited by 770 · see citing works

N6-Methyladenine DNA Modification in Drosophila

Zhang, G., Huang, H., Liu, D., Cheng, Y., Liu, X., Zhang, W., Yin, R., Zhang, D., Zhang, P., Liu, J., et al. (2015) · Cell · doi:10.1016/j.cell.2015.04.018 · Cited by 637 · see citing works

Iron uptake, trafficking and homeostasis in plants

Hell, R., & Stephan, U. W. (2003) · Planta · doi:10.1007/s00425-002-0920-4 · Cited by 627 · see citing works

Priming and memory of stress responses in organisms lacking a nervous system

Hilker, M., Schwachtje, J., Baier, M., Balazadeh, S., Bäurle, I., Geiselhardt, S., Hincha, D. K., Kunze, R., Mueller‐Roeber, B., Rillig, M. C., et al. (2015) · Biological reviews/Biological reviews of the Cambridge Philosophical Society · doi:10.1111/brv.12215 · Cited by 587 · see citing works

N6-Methyldeoxyadenosine Marks Active Transcription Start Sites in Chlamydomonas

Fu, Y., Luo, G., Chen, K., Deng, X., Yu, M., Han, D., Hao, Z., Liu, J., Lu, X., Doré, L. C., et al. (2015) · Cell · doi:10.1016/j.cell.2015.04.010 · Cited by 517 · see citing works

SPX1 is a phosphate-dependent inhibitor of PHOSPHATE STARVATION RESPONSE 1 in Arabidopsis

Puga, M. I., Mateos, I., Rajulu, C., Wang, Z., Franco‐Zorrilla, J. M., de Lorenzo, L., Irigoyen, M. L., Masiero, S., Bustos, R., Rodríguez, J., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1404654111 · Cited by 517 · see citing works

Perturbation of Indole-3-Butyric Acid Homeostasis by the UDP-GlucosyltransferaseUGT74E2ModulatesArabidopsisArchitecture and Water Stress Tolerance

Tognetti, V. B., Aken, O. V., Morreel, K., Vandenbroucke, K., van de Cotte, B., Clercq, I. D., Chiwocha, S. D. S., Fenske, R., Prinsen, E., Boerjan, W., et al. (2010) · The Plant Cell · doi:10.1105/tpc.109.071316 · Cited by 473 · see citing works

Rice SPX1 and SPX2 inhibit phosphate starvation responses through interacting with PHR2 in a phosphate-dependent manner

Wang, Z., Ruan, W., Shi, J., Zhang, L., Xiang, D., Yang, C., Li, C., Wu, Z., Liu, Y., Yu, Y., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1404680111 · Cited by 459 · see citing works

Genetic Regulation by NLA and MicroRNA827 for Maintaining Nitrate-Dependent Phosphate Homeostasis in Arabidopsis

Kant, S., Peng, M., & Rothstein, S. J. (2011) · PLoS Genetics · doi:10.1371/journal.pgen.1002021 · Cited by 434 · see citing works

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements

Secco, D., Wang, C., Shou, H., Schultz, M. D., Chiarenza, S., Nussaume, L., Ecker, J. R., Whelan, J., & Lister, R. (2015) · eLife · doi:10.7554/elife.09343 · Cited by 409 · see citing works

Regulation of Phosphate Starvation Responses in Plants: Signaling Players and Cross-Talks

Rouached, H., Arpat, A. B., & Poirier, Y. (2010) · Molecular Plant · doi:10.1093/mp/ssp120 · Cited by 404 · see citing works

NITROGEN LIMITATION ADAPTATION, a Target of MicroRNA827, Mediates Degradation of Plasma Membrane–Localized Phosphate Transporters to Maintain Phosphate Homeostasis in Arabidopsis

Lin, W., Huang, T., & Chiou, T. (2013) · The Plant Cell · doi:10.1105/tpc.113.116012 · Cited by 390 · see citing works

Ecological stress memory and cross stress tolerance in plants in the face of climate extremes

Walter, J., Jentsch, A., Beierkuhnlein, C., & Kreyling, J. (2012) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2012.02.009 · Cited by 381 · see citing works

Hyperosmotic stress memory in Arabidopsis is mediated by distinct epigenetically labile sites in the genome and is restricted in the male germline by DNA glycosylase activity

Wibowo, A. T., Becker, C., Marconi, G., Dürr, J., Price, J. L., Hagmann, J., Papareddy, R. K., Putra, H., Kageyama, J., Becker, J. D., et al. (2016) · eLife · doi:10.7554/elife.13546 · Cited by 380 · see citing works

A DEMETER-like DNA demethylase governs tomato fruit ripening

Liu, R., How‐Kit, A., Stammitti, L., Teyssier, E., Rolin, D., Mortain‐Bertrand, A., Halle, S., Liu, M., Kong, J., Wu, C., et al. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1503362112 · Cited by 372 · see citing works

The emerging importance of the SPX domain‐containing proteins in phosphate homeostasis

Secco, D., Wang, C., Arpat, A. B., Wang, Z., Poirier, Y., Tyerman, S. D., Wu, P., Shou, H., & Whelan, J. (2012) · New Phytologist · doi:10.1111/j.1469-8137.2011.04002.x · Cited by 368 · see citing works

Chilling-induced tomato flavor loss is associated with altered volatile synthesis and transient changes in DNA methylation

Zhang, B., Tieman, D. M., Jiao, C., Xu, Y., Chen, K., Fei, Z., Giovannoni, J. J., & Klee, H. J. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1613910113 · Cited by 335 · see citing works

Abiotic-stress induces demethylation and transcriptional activation of a gene encoding a glycerophosphodiesterase-like protein in tobacco plants

Choi, C., & Sano, H. (2007) · Molecular Genetics and Genomics · doi:10.1007/s00438-007-0209-1 · Cited by 331 · see citing works

Spatio-Temporal Transcript Profiling of Rice Roots and Shoots in Response to Phosphate Starvation and Recovery

Secco, D., Jabnoune, M., Walker, H., Shou, H., Wu, P., Poirier, Y., & Whelan, J. (2013) · The Plant Cell · doi:10.1105/tpc.113.117325 · Cited by 316 · see citing works

NITROGEN LIMITATION ADAPTATION Recruits PHOSPHATE2 to Target the Phosphate Transporter PT2 for Degradation during the Regulation of Arabidopsis Phosphate Homeostasis

Park, B. S., Seo, J. S., & Chua, N. (2014) · The Plant Cell · doi:10.1105/tpc.113.120311 · Cited by 311 · see citing works

Involvement of OsSPX1 in phosphate homeostasis in rice

Wang, C., Ying, S., Huang, H., Li, K., Wu, P., & Shou, H. (2008) · The Plant Journal · doi:10.1111/j.1365-313x.2008.03734.x · Cited by 289 · see citing works

Dynamic DNA Methylation in Plant Growth and Development

Bartels, A., Han, Q., Nair, P., Stacey, L., Gaynier, H., Mosley, M., Huang, Q., Pearson, J., Hsieh, T., An, Y. C., et al. (2018) · International Journal of Molecular Sciences · doi:10.3390/ijms19072144 · Cited by 277 · see citing works

Divergent DNA methylation patterns associated with gene expression in rice cultivars with contrasting drought and salinity stress response

Garg, R., Chevala, V. N., Shankar, R., & Jain, M. (2015) · Scientific Reports · doi:10.1038/srep14922 · Cited by 264 · see citing works

Arabidopsis thaliana High-Affinity Phosphate Transporters Exhibit Multiple Levels of Posttranslational Regulation

Bayle, V., Arrighi, J., Creff, A., Nespoulous, C., Vialaret, J., Rossignol, M., González, E., Paz‐Ares, J., & Nussaume, L. (2011) · The Plant Cell · doi:10.1105/tpc.110.081067 · Cited by 258 · see citing works

β‐Glucosidase BGLU 42 is a MYB 72‐dependent key regulator of rhizobacteria‐induced systemic resistance and modulates iron deficiency responses in A rabidopsis roots

Zamioudis, C., Hanson, J., & Pieterse, C. M. J. (2014) · New Phytologist · doi:10.1111/nph.12980 · Cited by 245 · see citing works

An Arabidopsis R2R3‐MYB transcription factor, AtMYB20, negatively regulates type 2C serine/threonine protein phosphatases to enhance salt tolerance

Cui, M. H., Yoo, K. S., Hyoung, S., Nguyen, H. T. K., Kim, Y. Y., Kim, H. J., Ok, S. H., Yoo, S. D., & Shin, J. S. (2013) · FEBS Letters · doi:10.1016/j.febslet.2013.04.028 · Cited by 242 · see citing works

Occurrence of 5-Methyl-Cytosine in Nucleic Acids

Wyatt, G. R. (1950) · Nature · doi:10.1038/166237b0 · Cited by 238 · see citing works

Cytosolic Glyceraldehyde-3-Phosphate Dehydrogenases Interact with Phospholipase Dδ to Transduce Hydrogen Peroxide Signals in the Arabidopsis Response to Stress

Guo, L., Devaiah, S. P., Narasimhan, R., Pan, X., Zhang, Y., Zhang, W., & Wang, X. (2012) · The Plant Cell · doi:10.1105/tpc.111.094946 · Cited by 234 · see citing works

Salt-induced transcription factor MYB74 is regulated by the RNA-directed DNA methylation pathway in Arabidopsis

Xu, R., Wang, Y., Zheng, H., Lü, W., Wu, C., Huang, J., Yan, K., Yang, G., & Zheng, C. (2015) · Journal of Experimental Botany · doi:10.1093/jxb/erv312 · Cited by 234 · see citing works

Transgenerational epimutations induced by multi-generation drought imposition mediate rice plant’s adaptation to drought condition

Zheng, X., Chen, L., Xia, H., Wei, H., Lou, Q., Li, M., Li, T., & Luo, L. (2017) · Scientific Reports · doi:10.1038/srep39843 · Cited by 233 · see citing works

RESEARCHES ON PYRIMIDINES. C111. THE DISCOVERY OF 5-METHYL-CYTOSINE IN TUBERCULINIC ACID, THE NUCLEIC ACID OF THE TUBERCLE BACILLUS1

Johnson, T. B., & Coghill, R. D. (1925) · Journal of the American Chemical Society · doi:10.1021/ja01688a030 · Cited by 201 · see citing works

The DNA demethylase ROS1 targets genomic regions with distinct chromatin modifications

Tang, K., Lang, Z., Zhang, H., & Zhu, J. (2016) · Nature Plants · doi:10.1038/nplants.2016.169 · Cited by 198 · see citing works

Hydrogen gas acts as a novel bioactive molecule in enhancing plant tolerance to paraquat‐induced oxidative stress via the modulation of heme oxygenase‐1 signalling system

Jin, Q., Zhu, K., Cui, W., Xie, Y., Han, B., & Shen, W. (2012) · Plant Cell & Environment · doi:10.1111/pce.12029 · Cited by 192 · see citing works

Inositol pyrophosphates promote the interaction of SPX domains with the coiled-coil motif of PHR transcription factors to regulate plant phosphate homeostasis

Ried, M., Wild, R., Zhu, J.-S., Pipercevic, J., Sturm, K., Broger, L., Harmel, R. K., Abriata, L., Hothorn, L., Fiedler, D., et al. (2019) · Nature Communications · doi:10.1038/s41467-020-20681-4 · Cited by 192 · see citing works

Single-base-resolution methylomes of populus trichocarpa reveal the association between DNA methylation and drought stress

Liang, D., Zhang, Z., Wu, H., Huang, C., Shuai, P., Ye, C., Tang, S., Wang, Y., Yang, L., Wang, J., et al. (2014) · BMC Genetics · doi:10.1186/1471-2156-15-s1-s9 · Cited by 188 · see citing works

Chromatin‐based mechanisms of temperature memory in plants

Friedrich, T., Faivre, L., Bäurle, I., & Schubert, D. (2019) · Plant, Cell & Environment · doi:10.1111/pce.13373 · Cited by 182 · see citing works

Type‐B monogalactosyldiacylglycerol synthases are involved in phosphate starvation‐induced lipid remodeling, and are crucial for low‐phosphate adaptation

Kobayashi, K., Awai, K., Nakamura, M., Nagatani, A., Masuda, T., & Ohta, H. (2008) · The Plant Journal · doi:10.1111/j.1365-313x.2008.03692.x · Cited by 177 · see citing works

Loss of the R2R3 MYB, AtMyb73, causes hyper-induction of the SOS1 and SOS3 genes in response to high salinity in Arabidopsis

Kim, J. H., Nguyen, N. H., Jeong, C. Y., Nguyen, N. T., Hong, S., & Lee, H. (2013) · Journal of Plant Physiology · doi:10.1016/j.jplph.2013.05.011 · Cited by 167 · see citing works

Regulated AtHKT1 Gene Expression by a Distal Enhancer Element and DNA Methylation in the Promoter Plays an Important Role in Salt Tolerance

Baek, D., Jiang, J., Chung, J., Wang, B., Chen, J., Xin, Z., & Shi, H. (2010) · Plant and Cell Physiology · doi:10.1093/pcp/pcq182 · Cited by 159 · see citing works

Mutations in the DNA demethylase OsROS1 result in a thickened aleurone and improved nutritional value in rice grains

Liu, J., Wu, X., Yao, X., Yu, R., Larkin, P. J., & Liu, C. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1806304115 · Cited by 153 · see citing works

Analysis of DNA methylation of maize in response to osmotic and salt stress based on methylation-sensitive amplified polymorphism

Tan, M. (2009) · Plant Physiology and Biochemistry · doi:10.1016/j.plaphy.2009.10.005 · Cited by 147 · see citing works

Identification of genes preventing transgenerational transmission of stress-induced epigenetic states

Iwasaki, M., & Paszkowski, J. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1402275111 · Cited by 147 · see citing works

Lipid Peroxide-Derived Short-Chain Carbonyls Mediate Hydrogen Peroxide-Induced and Salt-Induced Programmed Cell Death in Plants

Biswas, M. S., & Mano, J. (2015) · PLANT PHYSIOLOGY · doi:10.1104/pp.115.256834 · Cited by 144 · see citing works

Cold acclimation alters DNA methylation patterns and confers tolerance to heat and increases growth rate in Brassica rapa

Liu, T., Li, Y., Duan, W., Huang, F., & Hou, X. (2017) · Journal of Experimental Botany · doi:10.1093/jxb/erw496 · Cited by 139 · see citing works

AsHSP17, a creeping bentgrass small heat shock protein modulates plant photosynthesis and ABA‐dependent and independent signalling to attenuate plant response to abiotic stress

Sun, X., Sun, C., Li, Z., Hu, Q., Han, L., & Luo, H. (2015) · Plant Cell & Environment · doi:10.1111/pce.12683 · Cited by 133 · see citing works

AtROS1 overexpression provides evidence for epigenetic regulation of genes encoding enzymes of flavonoid biosynthesis and antioxidant pathways during salt stress in transgenic tobacco

Bharti, P., Mahajan, M., Vishwakarma, A. K., Bhardwaj, J., & Yadav, S. K. (2015) · Journal of Experimental Botany · doi:10.1093/jxb/erv304 · Cited by 126 · see citing works

Overexpression of a cytosolic glyceraldehyde-3-phosphate dehydrogenase gene OsGAPC3 confers salt tolerance in rice

Zhang, X.-H., Rao, X., Shi, H., Li, R., & Lu, Y. (2011) · Plant Cell Tissue and Organ Culture (PCTOC) · doi:10.1007/s11240-011-9950-6 · Cited by 114 · see citing works

A vitamin-C-derived DNA modification catalysed by an algal TET homologue

Xue, J., Chen, G.-D., Hao, F., Chen, H., Fang, Z., Chen, F., Pang, B., Yang, Q., Wei, X., Fan, Q.-Q., et al. (2019) · Nature · doi:10.1038/s41586-019-1160-0 · Cited by 110 · see citing works

Divergent cytosine DNA methylation patterns in single‐cell, soybean root hairs

Hossain, M. S., Kawakatsu, T., Kim, K. D., Zhang, N., Nguyen, C. T., Khan, S. M., Batek, J. M., Joshi, T., Schmutz, J., Grimwood, J., et al. (2017) · New Phytologist · doi:10.1111/nph.14421 · Cited by 101 · see citing works

Differentiating phosphate-dependent and phosphate-independent systemic phosphate-starvation response networks in Arabidopsis thaliana through the application of phosphite

Jost, R., Pharmawati, M., Lapis-Gaza, H. R., Roßig, C., Berkowitz, O., Lambers, H., & Finnegan, P. M. (2015) · Journal of Experimental Botany · doi:10.1093/jxb/erv025 · Cited by 97 · see citing works

Heat-Induced Release of Epigenetic Silencing Reveals the Concealed Role of an Imprinted Plant Gene

Sánchez, D. H., & Paszkowski, J. (2014) · PLoS Genetics · doi:10.1371/journal.pgen.1004806 · Cited by 95 · see citing works

Minimal evidence for consistent changes in maize DNA methylation patterns following environmental stress

Eichten, S. R., & Springer, N. M. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00308 · Cited by 94 · see citing works

Water-deficiency conditions differently modulate the methylome of roots and leaves in barley (Hordeum vulgareL.)

Chwiałkowska, K., Nowakowska, U., Mroziewicz, A., Szarejko, I., & Kwaśniewski, M. (2016) · Journal of Experimental Botany · doi:10.1093/jxb/erv552 · Cited by 93 · see citing works

Ethylene-independent functions of the ethylene precursor ACC in Marchantia polymorpha

Li, D., Flores‐Sandoval, E., Ahtesham, U., Coleman, A., Clay, J. M., Bowman, J. L., & Chang, C. (2020) · Nature Plants · doi:10.1038/s41477-020-00784-y · Cited by 86 · see citing works

Analysis of DNA methylation patterns associated with drought stress response in faba bean ( Vicia faba L.) using methylation-sensitive amplification polymorphism (MSAP)

Abid, G., Mingeot, D., Muhovski, Y., Mergeai, G., Aouida, M., Abdelkarim, S., Aroua, I., Ayed, M. E., M’Hamdi, M., Sassı, K., et al. (2017) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2017.08.004 · Cited by 85 · see citing works

Stable methylation of a non-coding RNA gene regulates gene expression in response to abiotic stress in Populus simonii

Song, Y., Ci, D., Tian, M., & Zhang, D. (2015) · Journal of Experimental Botany · doi:10.1093/jxb/erv543 · Cited by 82 · see citing works

Aluminium resistant, plant growth promoting bacteria induce overexpression of Aluminium stress related genes in Arabidopsis thaliana and increase the ginseng tolerance against Aluminium stress

Farh, M. E.-A., Kim, Y.-J., Sukweenadhi, J., Singh, P., & Yang, D. (2017) · Microbiological Research · doi:10.1016/j.micres.2017.04.004 · Cited by 78 · see citing works

Retrospective and perspective of plant epigenetics in China

Duan, C., Zhu, J., & Cao, X. (2018) · Journal of genetics and genomics/Journal of Genetics and Genomics · doi:10.1016/j.jgg.2018.09.004 · Cited by 78 · see citing works

Carbon Monoxide Is Involved in Hydrogen Gas-Induced Adventitious Root Development in Cucumber under Simulated Drought Stress

Chen, Y., Wang, M., Hu, L., Liao, W., Dawuda, M. M., & Li, C. (2017) · Frontiers in Plant Science · doi:10.3389/fpls.2017.00128 · Cited by 75 · see citing works

Methylation of miRNA genes in the response to temperature stress in Populus simonii

Ci, D., Song, Y., Tian, M., & Zhang, D. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00921 · Cited by 74 · see citing works

Mechanistic Basis for Maintenance of CHG DNA Methylation in Plants

Fang, J., Jiang, J., Leichter, S. M., Liu, J., Biswal, M., Khudaverdyan, N., Zhong, X., & Song, J. (2022) · Nature Communications · doi:10.1038/s41467-022-31627-3 · Cited by 69 · see citing works

Chilling- and Freezing- Induced Alterations in Cytosine Methylation and Its Association with the Cold Tolerance of an Alpine Subnival Plant, Chorispora bungeana

Song, Y., Liu, L., Feng, Y., Wei, Y., Yue, X., He, W., Zhang, H., & An, L. (2015) · PLoS ONE · doi:10.1371/journal.pone.0135485 · Cited by 69 · see citing works

Role of Arabidopsis UV RESISTANCE LOCUS 8 in Plant Growth Reduction under Osmotic Stress and Low Levels of UV-B

Fasano, R., González, N., Tosco, A., Piaz, F. D., Docimo, T., Serrano, R., Grillo, S., Leone, A., & Inzé, D. (2014) · Molecular Plant · doi:10.1093/mp/ssu002 · Cited by 68 · see citing works

Iron deficiency in barley plants: phytosiderophore release, iron translocation, and DNA methylation

Bocchini, M., Bartucca, M. L., Ciancaleoni, S., Mimmo, T., Cesco, S., Pii, Y., Albertini, E., & Buono, D. D. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00514 · Cited by 66 · see citing works

Temperature and photoperiod changes affect cucumber sex expression by different epigenetic regulations

Lai, Y., Shen, D., Zhang, W., Zhang, X., Qiu, Y., Wang, H., Dou, X., Li, S., Wu, Y., Song, J., et al. (2018) · BMC Plant Biology · doi:10.1186/s12870-018-1490-3 · Cited by 62 · see citing works

Regulation of genome‐wide DNA methylation by mobile small RNAs

Tamiru, M., Hardcastle, T. J., & Lewsey, M. G. (2017) · New Phytologist · doi:10.1111/nph.14874 · Cited by 61 · see citing works

Genome-wide CpG density and DNA methylation analysis method (MeDIP, RRBS, and WGBS) comparisons.

Beck, D., Maamar, M. B., & Skinner, M. K. (2022) · PubMed Central · doi:10.1080/15592294.2021.1924970 · Cited by 57 · see citing works

The pattern of DNA methylation alteration, and its association with the changes of gene expression and alternative splicing during phosphate starvation in tomato

Tian, P., Lin, Z., Lin, D., Dong, S., Huang, J., & Huang, T. (2021) · The Plant Journal · doi:10.1111/tpj.15486 · Cited by 53 · see citing works

Unisexual Cucumber Flowers, Sex and Sex Differentiation

Bai, S., & Xu, Z. H. (2013) · International review of cytology · doi:10.1016/b978-0-12-407696-9.00001-4 · Cited by 47 · see citing works

SlAGO4A, a core factor of RNA-directed DNA methylation (RdDM) pathway, plays an important role under salt and drought stress in tomato

Huang, W., Xian, Z., Hu, G., & Li, Z. (2016) · Molecular Breeding · doi:10.1007/s11032-016-0439-1 · Cited by 47 · see citing works

Roles of DEMETER in regulating DNA methylation in vegetative tissues and pathogen resistance

Zeng, W., Huang, H., Lin, X., Zhu, C., Kosami, K., Huang, C., Zhang, H., Duan, C., Zhu, J., & Miki, D. (2020) · Journal of Integrative Plant Biology · doi:10.1111/jipb.13037 · Cited by 47 · see citing works

Cytosine Methylation Alteration in Natural Populations of Leymus chinensis Induced by Multiple Abiotic Stresses

Yu, Y., Yang, X., Wang, H., Shi, F., Liu, Y., Liu, J., Li, L., Wang, D., & Liu, B. (2013) · PLoS ONE · doi:10.1371/journal.pone.0055772 · Cited by 43 · see citing works

HyPRP1 Gene Suppressed by Multiple Stresses Plays a Negative Role in Abiotic Stress Tolerance in Tomato

Li, J., Ouyang, B., Wang, T., Luo, Z., Yang, C., Li, J., Sima, W., Zhang, J., & Ye, Z. (2016) · Frontiers in Plant Science · doi:10.3389/fpls.2016.00967 · Cited by 43 · see citing works

DNA methylation is involved in acclimation to iron‐deficiency in rice ( Oryza sativa )

Sun, S., Zhu, J., Guo, R., Whelan, J., & Shou, H. (2021) · The Plant Journal · doi:10.1111/tpj.15318 · Cited by 40 · see citing works

Sulfur dioxide enhance drought tolerance of wheat seedlings through H2S signaling

Li, L., Yi, H., Liu, X.-P., & Qi, H. (2020) · Ecotoxicology and Environmental Safety · doi:10.1016/j.ecoenv.2020.111248 · Cited by 40 · see citing works

Expression analysis and promoter methylation under osmotic and salinity stress of TaGAPC1 in wheat (Triticum aestivum L)

Fei, Y., Xue, Y., Du, P., Yang, S., & Deng, X. (2016) · PROTOPLASMA · doi:10.1007/s00709-016-1008-5 · Cited by 39 · see citing works

CHH methylation of genes associated with fatty acid and jasmonate biosynthesis contributes to cold tolerance in autotetraploids of Poncirus trifoliata

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DNA methylation related gene expression and morphophysiological response to abiotic stresses in Arabidopsis thaliana

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