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STAR: ultrafast universal RNA-seq aligner

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A Unique Microglia Type Associated with Restricting Development of Alzheimer’s Disease

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Host microbiota constantly control maturation and function of microglia in the CNS

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Intraneuronal β-Amyloid Aggregates, Neurodegeneration, and Neuron Loss in Transgenic Mice with Five Familial Alzheimer's Disease Mutations: Potential Factors in Amyloid Plaque Formation

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Fate Mapping Reveals Origins and Dynamics of Monocytes and Tissue Macrophages under Homeostasis

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Microglia in Alzheimer’s Disease

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Genetic Interaction-Based Biomarkers Identification for Drug Resistance and Sensitivity in Cancer Cells

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Clinical significance of HDAC1, -2 and -3 expression levels in esophageal squamous cell carcinoma

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Propionate Decreases Microglial Activation but Impairs Phagocytic Capacity in Response to Aggregated Fibrillar Amyloid Beta Protein

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Alterations in Chromatin Structure and Function in the Microglia

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Phenomic Microglia Diversity as a Druggable Target in the Hippocampus in Neurodegenerative Diseases

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Epigenetics and Pharmacoepigenetics of Age-Related Neurodegenerative Disorders

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ATG5 in microglia does not contribute vitally to autoimmune neuroinflammation in mice

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The 5XFAD mouse model of Alzheimer’s disease displays age-dependent deficits in habituation to a novel environment

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In Vivo Phagocytosis Analysis of Amyloid Beta

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ChIP‐seq Profiling Identifies Histone Deacetylase 2 Targeting Genes Involved in Immune and Inflammatory Regulation Induced by Calcitonin Gene‐Related Peptide in Microglial Cells

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Inhibition of HDAC1 alleviates monocrotaline-induced pulmonary arterial remodeling through up-regulation of miR-34a

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Trained Microglia Trigger Memory Loss

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PI3K/ NF-κB-dependent TNF-α and HDAC activities facilitate LPS-induced RGS10 suppression in pulmonary macrophages

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High levels of HDAC expression correlate with microglial aging

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Alpha-Synuclein-induced DNA Methylation and Gene Expression in Microglia

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The overexpression of miR-146a in hippocampal microglia via IRAK1/TRAF6/NF-κB pathway improves cognitive function in diabetic mice

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Epigenetic Regulation of the Hippocampus, with Special Reference to Radiation Exposure

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The close link between the fetal programming imprinting and neurodegeneration in adulthood: The key role of “hemogenic endothelium” programming

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MiR-146a-5p Contributes to Microglial Polarization Transitions Associated With AGEs

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Cromolyn platform suppresses fibrosis and inflammation, promotes microglial phagocytosis and neurite outgrowth

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HDAC Inhibitors recapitulate Human Disease-Associated Microglia Signatures in vitro

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Epigenetics and Pharmacoepigenetics of Neurodevelopmental and Neuropsychiatric Disorders

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The glial-specific hypermethylated 3′ untranslated region of histone deacetylase 1 may modulates several signal pathways in Alzheimer's disease

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The Role of the Neural Exposome as a Novel Strategy to Identify and Mitigate Health Inequities in Alzheimer’s Disease and Related Dementias

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Investigating the Synergistic Potential of Low-Dose HDAC3 Inhibition and Radiotherapy in Alzheimer’s Disease Models

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Biological functions and therapeutic potential of acylation by histone acetyltransferases

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How myeloid cells shape experimental autoimmune encephalomyelitis: At the crossroads of outside‐in immunity

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Epigenetic alterations fuel brain metastasis via regulating inflammatory cascade

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Innate immune memory in chronic HIV and HIV-associated neurocognitive disorders (HAND): potential mechanisms and clinical implications

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Histone deacetylases: the critical enzymes for microglial activation involved in neuropathic pain

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Metabolic Flexibility Assists Reprograming of Central and Peripheral Innate Immunity During Neurodevelopment

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A Developmental Switch in Microglial HDAC Function

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HDAC Inhibitors recapitulate Human Disease-Associated Microglia Signatures in vitroPreprint

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Decoding molecular recognition of inhibitors targeting HDAC2 via molecular dynamics simulations and configurational entropy estimation

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Microglial histone deacetylase 2 is dispensable for functional and histological outcomes in a mouse model of traumatic brain injury

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HDAC1/2 and HDAC3 play distinct roles in controlling adult Meibomian gland homeostasis

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Npc1 deficiency impairs microglia function via TREM2-mTOR signaling in Niemann-Pick disease type C

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Epigenomic and transcriptional determinants of microglial cell identity

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Epigenetic regulation of immune cells in central nervous system: from steady state to pathology

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Rhynchophylline alleviates cognitive deficits in multiple transgenic mouse models of Alzheimer’s disease via modulating neuropathology and gut microbiota

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CHAS, a deconvolution tool, infers cell type-specific signatures in bulk brain histone acetylation studies of neurological and psychiatric disordersPreprint

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Long-range action of an HDAC inhibitor treats chronic pain in a spared nerve injury rat modelPreprint

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The Spectrum of Microglia: Decoding Heterogeneity and Plasticity for Therapeutic Gain in Neurological Disorders

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CHAS infers cell type-specific signatures in bulk brain histone acetylation studies of neurological and psychiatric disorders

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A Triple combination formulation of an HDAC inhibitor treats chronic pain in rodent spared nerve injury model

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CIITA expression is regulated by histone deacetylase enzymes and has a role in α-synuclein pre-formed fibril-induced antigen presentation in murine microglial cell line

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The role of microbiota modulation in preventing Alzheimer’s disease- a review

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Glioinflammation: disease-associated microglia and astrocytes in psychiatric disorders, neurodegeneration, and senescence

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Alzheimer’s disease and microorganisms: the non-coding RNAs crosstalk

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Microglia activation by derepression of endogenous retroviruses drives inflammation and cellular senescence

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Phenethyl isothiocynate attenuates Parkinson's disease and improves performance in hanging wire, rotarod and actophotometer test & dopamine levels in rats via inhibiting HDAC-1

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Epigenetic changes in post-traumatic stress disorder: possibilities and limitations of epigenetic therapy

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Role of epigenetics in the brain

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The development and physiological and pathophysiological functions of resident macrophages and glial cells

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Age-related Dysregulation of Autophagy Contributes to Microglial Dysfunction and Chronic Neurobehavioral Deficits After Traumatic Brain InjuryPreprint

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High-Throughput Screening on Primary Tumor-Associated Microglia and Macrophages Identifies HDAC Inhibitors as Enhancers of Phagocytosis and Potent Partners for Immunotherapy in GlioblastomaPreprint

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Quantification of Global Histone Post Translational Modifications Using Intranuclear Flow Cytometry in Isolated Mouse Brain Microglia

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Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

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An anti-aging vaccine: BCG turns back the clock on remyelination failure

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Integrated network pharmacology, molecular docking and MD simulation unravel neuroprotective phytochemicals from aframomum melegueta targeting microglial neuroinflammation in Alzheimer’s disease

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Gut microbiota and SCFA dysregulation drive MDPV-induced behavioral and neuroimmune adaptations in male mice

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A Patient-Derived Screen Identifies HDAC Inhibitors as Enhancers of Phagocytosis and Potent Immunotherapy Partners

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Potential Key Proteins, Molecular Networks, and Pathways in Perinatal Hypoxia

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Essential contributions of enhancer genomic regulatory elements to microglial cell identity and functions

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Epigenetic regulation of alveolar macrophage homeostasis by histone deacetylase 1 and 2Preprint

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KOLF2.1J iTF-Microglia: A standardized platform to study microglial transcriptional regulatory networks in CNS diseasePreprint

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Regulation of LPS-Induced Neuroinflammation by Targeting Microglia in vivo Using Chemogenetics

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Role of Withaferin A as a Neuroprotectant against Beta Amyloid Induced Toxicity and associated mechanism

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Microglial Expression of Hdac1 and Hdac2 is Dispensable for Experimental Autoimmune Encephalomyelitis (EAE) Progression

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Hdac1 and Hdac2 are essential for physiological maturation of a Cx3cr1 expressing subset of T-lymphocytes

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Pain and immunity

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Strategies for the study of neuroepigenetics and aging with a translational approach

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JoVE Video Dataset

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Microbiome in multiple sclerosis

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The Research Progress of Molecular Hydrogen in the Treatment of Traumatic Brain Injury: A Review

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The Role of Microglia and NLRP3 Inflammasome in Perioperative Neurocognitive DisordersPreprint

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The role of microglia in neurocognitive deficits induced by general anaesthetic agents during neurodevelopment

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Chronic HDACi emends microglial differentiation and neurological disease in a mouse model of intellectual disabilityPreprint

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The epigenetic constellation of neurodevelopment disorders

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Additional file 1 of Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

Liu, S. X., Ramakrishnan, A., Shen, L., Gewirtz, J. C., Georgieff, M. K., & Tran, P. V. (2024) · Figshare · doi:10.6084/m9.figshare.25459510

Additional file 4 of Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

Liu, S. X., Ramakrishnan, A., Shen, L., Gewirtz, J. C., Georgieff, M. K., & Tran, P. V. (2024) · Figshare · doi:10.6084/m9.figshare.26696277

Additional file 3 of Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

Liu, S. X., Ramakrishnan, A., Shen, L., Gewirtz, J. C., Georgieff, M. K., & Tran, P. V. (2024) · Figshare · doi:10.6084/m9.figshare.26696274

Additional file 2 of Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer’s disease

Mezö, C., Dokalis, N., Mossad, O., Staszewski, O., Neuber, J., Yilmaz, B., Schnepf, D., de Agüero, M. G., Ganal-Vonarburg, S. C., Macpherson, A. J., et al. (2020) · Figshare · doi:10.6084/m9.figshare.12737607

Additional file 5 of Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer’s disease

Mezö, C., Dokalis, N., Mossad, O., Staszewski, O., Neuber, J., Yilmaz, B., Schnepf, D., de Agüero, M. G., Ganal-Vonarburg, S. C., Macpherson, A. J., et al. (2020) · Figshare · doi:10.6084/m9.figshare.12737616

Additional file 2 of Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

Liu, S. X., Ramakrishnan, A., Shen, L., Gewirtz, J. C., Georgieff, M. K., & Tran, P. V. (2024) · Figshare · doi:10.6084/m9.figshare.25459657

Additional file 3 of Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer’s disease

Mezö, C., Dokalis, N., Mossad, O., Staszewski, O., Neuber, J., Yilmaz, B., Schnepf, D., de Agüero, M. G., Ganal-Vonarburg, S. C., Macpherson, A. J., et al. (2020) · Figshare · doi:10.6084/m9.figshare.12737610

Additional file 4 of Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer’s disease

Mezö, C., Dokalis, N., Mossad, O., Staszewski, O., Neuber, J., Yilmaz, B., Schnepf, D., de Agüero, M. G., Ganal-Vonarburg, S. C., Macpherson, A. J., et al. (2020) · Figshare · doi:10.6084/m9.figshare.12737613

Additional file 5 of Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

Liu, S. X., Ramakrishnan, A., Shen, L., Gewirtz, J. C., Georgieff, M. K., & Tran, P. V. (2024) · Figshare · doi:10.6084/m9.figshare.26696280

Additional file 6 of Chromatin accessibility and H3K9me3 landscapes reveal long-term epigenetic effects of fetal-neonatal iron deficiency in rat hippocampus

Liu, S. X., Ramakrishnan, A., Shen, L., Gewirtz, J. C., Georgieff, M. K., & Tran, P. V. (2024) · Figshare · doi:10.6084/m9.figshare.26696286

Additional file 1 of Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer’s disease

Mezö, C., Dokalis, N., Mossad, O., Staszewski, O., Neuber, J., Yilmaz, B., Schnepf, D., de Agüero, M. G., Ganal-Vonarburg, S. C., Macpherson, A. J., et al. (2020) · Figshare · doi:10.6084/m9.figshare.12737604

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