Handling missing data in clinical research
Open accessAbstract
Because missing data are present in almost every study, it is important to handle missing data properly. First of all, the missing data mechanism should be considered. Missing data can be either completely at random (MCAR), at random (MAR), or not at random (MNAR). When missing data are MCAR, a complete case analysis can be valid. Also when missing data are MAR, in some situations a complete case analysis leads to valid results. However, in most situations, missing data imputation should be used. Regarding imputation methods, it is highly advised to use multiple imputations because multiple imputations lead to valid estimates including the uncertainty about the imputed values. When missing data are MNAR, also multiple imputations do not lead to valid results. A complication hereby is that it not possible to distinguish whether missing data are MAR or MNAR. Finally, it should be realized that preventing to have missing data is always better than the treatment of missing data.
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Protocol authors have a choice between various methods for handling anticipated missing data, including imputing data, fitting a mixed effects model to repeated measures data, or omitting participants.
“When planning to handle anticipated missing data, protocol authors have a choice between various methods, including imputing data, fitting a mixed effects model to repeated measures data, or omitting participants.428 429”
From SPIRIT 2025 explanation and elaboration: updated guideline for protocols of randomised trials (2025) · cites this paper as [429]
The mechanism resulting in missing data affects the risk of bias and decisions on how best to handle the missing data.
“The mechanism resulting in missing data affects the risk of bias and decisions on how best to handle the missing data.428 429”
From SPIRIT 2025 explanation and elaboration: updated guideline for protocols of randomised trials (2025) · cites this paper as [429]
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- Authors
- Heymans, M. W., & Twisk, J. W. R.
- Affiliations
- Amsterdam University Medical Centers (NL)
- Corresponding author
- Twisk, Jos W.R.
- Venue
- Journal of Clinical Epidemiology
- Publisher
- Elsevier BV
- Published
- 2022-11
- Volume
- 151
- Pages
- 185-188
- ISSN
- 0895-4356 (ISSN-L)
- OpenAlex
- W4296631245
- Cited by
- 399
- References
- 27
- Citations by year
- 2026: 153 · 2025: 129 · 2024: 90 · 2023: 27
- FWCI
- 45.37
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- Locations
- Journal of Clinical Epidemiology (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Amsterdam UMC (VU Amsterdam) - Institutional Repository (publishedVersion, other-oa)
- Pure Amsterdam UMC (submittedVersion, cc-by)
- Data Archiving and Networked Services (DANS) (submittedVersion, other-oa)
- Topics
- Physical Sciences › Mathematics › Statistics and Probability › Statistical Methods and Bayesian Inference
- Physical Sciences › Mathematics › Statistics and Probability › Statistical Methods in Clinical Trials
- Physical Sciences › Mathematics › Statistics and Probability › Statistical Methods in Epidemiology
- Keywords
- missing data, missing data mechanisms, complete case analysis, multiple imputation, missing at random, missing not at random, clinical research, imputation uncertainty
- MeSH terms
- Humans, Uncertainty
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
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