The DOI matches its Crossref record; 90 of the 90 references it cites were found in a registry or an index.
Bacterial Transcription Terminators: The RNA 3′-End Chronicles
Open accessAbstract
The process of transcription termination is essential to proper expression of bacterial genes and, in many cases, to the regulation of bacterial gene expression. Two types of bacterial transcriptional terminators are known to control gene expression. Intrinsic terminators dissociate transcription complexes without the assistance of auxiliary factors. Rho-dependent terminators are sites of dissociation mediated by an RNA helicase called Rho. Despite decades of study, the molecular mechanisms of both intrinsic and Rho-dependent termination remain uncertain in key details. Most knowledge is based on the study of a small number of model terminators. The extent of sequence diversity among functional terminators and the extent of mechanistic variation as a function of sequence diversity are largely unknown. In this review, we consider the current state of knowledge about bacterial termination mechanisms and the relationship between terminator sequence and steps in the termination mechanism.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
WebLogo: A Sequence Logo Generator: Figure 1
Crooks, G. E., Hon, G., Chandonia, J.-M., & Brenner, S. E. (2004) · Genome Research · doi:10.1101/gr.849004 · Cited by 12,386
Sequence logos: a new way to display consensus sequences
Schneider, T. D., & Stephens, R. M. (1990) · Nucleic Acids Research · doi:10.1093/nar/18.20.6097 · Cited by 3,378
REGULATORY SEQUENCES INVOLVED IN THE PROMOTION AND TERMINATION OF RNA TRANSCRIPTION
Rosenberg, M., & Court, D. (1979) · Annual Review of Genetics · doi:10.1146/annurev.ge.13.120179.001535 · Cited by 2,709
Anderson, E. N. (1977) · eScholarship (California Digital Library) · Cited by 2,567
Structural Basis of Transcription: RNA Polymerase II at 2.8 Ångstrom Resolution
Cramer, P., Bushnell, D. A., & Kornberg, R. D. (2001) · Science · doi:10.1126/science.1059493 · Cited by 1,247
Termination Factor for RNA Synthesis
ROBERTS, J. W. (1969) · Nature · doi:10.1038/2241168a0 · Cited by 811
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution
Vassylyev, D. G., Sekine, S.-I., Laptenko, O., Lee, J., Vassylyeva, M. N., Borukhov, S., & Yokoyama, S. (2002) · Nature · doi:10.1038/nature752 · Cited by 743
Control of Transcription Termination
Adhya, S. L., & Gottesman, M. E. (1978) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.47.070178.004535 · Cited by 625
Cooperation Between Translating Ribosomes and RNA Polymerase in Transcription Elongation
Proshkin, S., Rahmouni, A. R., Mironov, A., & Nudler, E. (2010) · Science · doi:10.1126/science.1184939 · Cited by 561
Water vapour in the atmosphere of a transiting extrasolar planet
Tinetti, G., Vidal-Madjar, A., Liang, M.-C., Beaulieu, J.-P., Yung, Y., Carey, S., Barber, R. J., Tennyson, J., Ribas, I., Allard, N., et al. (2007) · Nature · doi:10.1038/nature06002 · Cited by 544
Cited by
Rho and NusG suppress pervasive antisense transcription in Escherichia coli
Peters, J. M., Mooney, R. A., Grass, J. A., Jessen, E. D., Tran, F., & Landick, R. (2012) · Genes & Development · doi:10.1101/gad.196741.112 · Cited by 264
Self-citationPervasive Regulatory Functions of mRNA Structure Revealed by High-Resolution SHAPE Probing
Mustoe, A. M., Busan, S., Rice, G. M., Hajdin, C. E., Peterson, B. K., Ruda, V. M., Kubica, N., Nutiu, R., Baryza, J. L., & Weeks, K. M. (2018) · Cell · doi:10.1016/j.cell.2018.02.034 · Cited by 258
Bervoets, I., & Charlier, D. (2019) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuz001 · Cited by 180
The MazF-regulon: a toolbox for the post-transcriptional stress response in Escherichia coli
Sauert, M., Wolfinger, M. T., Vesper, O., Müller, C., Byrgazov, K., & Moll, I. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkw115 · Cited by 57
Canestrari, J. G., Lasek‐Nesselquist, E., Upadhyay, A., Rofaeil, M., Champion, M. M., Wade, J. T., Derbyshire, K. M., & Gray, T. A. (2020) · Molecular Microbiology · doi:10.1111/mmi.14498 · Cited by 25
Metadata
- Authors
- Peters, J. M., Vangeloff, A. D., & Landick, R.
- Venue
- Journal of Molecular Biology
- Publisher
- Elsevier BV
- Published
- 2011-10
- Volume
- 412
- Issue
- 5
- Pages
- 793-813
- ISSN
- 0022-2836 (ISSN-L)
- OpenAlex
- W2012681204
- Cited by
- 306
- References
- 90
- FWCI
- 14.25
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Bacterial Transcription Terminators: The RNA 3′-End Chronicles. https://app.cochat.ai/papers/10.1016/j.jmb.2011.03.036
- The paper
- Peters, J. M., Vangeloff, A. D., & Landick, R. (2011). Bacterial Transcription Terminators: The RNA 3′-End Chronicles. Journal of Molecular Biology. https://doi.org/10.1016/j.jmb.2011.03.036
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
