Identification of a myofibroblast-specific expression signature in skin wounds
Abstract
After skin injury fibroblasts migrate into the wound and transform into contractile, extracellular matrix-producing myofibroblasts to promote skin repair. Persistent activation of myofibroblasts can cause excessive fibrotic reactions, but the underlying mechanisms are not fully understood. We used SMA-GFP transgenic mice to study myofibroblast recruitment and activation in skin wounds. Myofibroblasts were initially recruited to wounds three days post injury, their number reached a maximum after seven days and subsequently declined. Expression profiling showed that 1749 genes were differentially expressed in sorted myofibroblasts from wounds seven days post injury. Most of these genes were linked with the extracellular region and cell periphery including genes encoding for extracellular matrix proteins. A unique panel of core matrisome and matrisome-associated genes was differentially expressed in myofibroblasts and several genes not yet known to be linked to myofibroblast-mediated wound healing were found (e.g. Col24a1, Podnl1, Bvcan, Tinagl1, Thbs3, Adamts16, Adamts19, Cxcl's, Ccl's). In addition, a complex network of G protein-coupled signaling events was regulated in myofibroblasts (e.g. Adcy1, Plbc4, Gnas). Hence, this first characterization of a myofibroblast-specific expression profile at the peak of in situ granulation tissue formation provides important insights into novel target genes that may control excessive ECM deposition during fibrotic reactions.
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Fibroblasts are capable of remarkable plasticity and phenotype switching during progression and regression of fibrosis.
“Fibroblasts, in addition to displaying significant functional heterogeneity, are capable of remarkable degrees of plasticity and phenotype switching during progression and regression of fibrosis30,35,36.”
From Fibrosis: from mechanisms to medicines (2020) · cites this paper as [35]
Cites
STRING v10: protein–protein interaction networks, integrated over the tree of life
Szklarczyk, D., Franceschini, A., Wyder, S., Forslund, K., Heller, D., Huerta-Cepas, J., Simonovic, M., Roth, A., Santos, A., Tsafou, K. P., et al. (2015) · Nucleic Acids Research · doi:10.1093/nar/gku1003 · Cited by 10,436 · see citing works
KEGG as a reference resource for gene and protein annotation
Kanehisa, M., Sato, Y., Kawashima, M., Furumichi, M., & Tanabe, M. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkv1070 · Cited by 7,387 · see citing works
Remodelling the extracellular matrix in development and disease
Bonnans, C., Chou, J., & Werb, Z. (2014) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3904 · Cited by 4,367 · see citing works
Gene Ontology Consortium: going forward
The Gene Ontology Consortium (2015) · Nucleic Acids Research · doi:10.1093/nar/gku1179 · Cited by 3,492 · see citing works
Overview of the Matrisome--An Inventory of Extracellular Matrix Constituents and Functions
Hynes, R. O., & Naba, A. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a004903 · Cited by 1,349 · see citing works
FunRich: An open access standalone functional enrichment and interaction network analysis tool
Pathan, M., Keerthikumar, S., Ang, C., Gangoda, L., Quek, C. Y. J., Williamson, N. A., Mouradov, D., Sieber, O. M., Simpson, R. J., Salim, A., et al. (2015) · PROTEOMICS · doi:10.1002/pmic.201400515 · Cited by 1,319 · see citing works
The Reactome pathway Knowledgebase
Fabregat, A., Sidiropoulos, K., Garapati, P., Gillespie, M., Hausmann, K., Haw, R., Jassal, B., Jupe, S., Korninger, F., McKay, S., et al. (2016) · Nucleic Acids Research · doi:10.1093/nar/gkv1351 · Cited by 1,201 · see citing works
The extracellular matrix: tools and insights for the "omics" era
Naba, A., Clauser, K. R., Ding, H., Whittaker, C. A., Carr, S. A., & Hynes, R. O. (2016) · Matrix Biology · doi:10.1016/j.matbio.2015.06.003 · Cited by 1,037 · see citing works
Extracellular Matrix and Dermal Fibroblast Function in the Healing Wound
Tracy, L. E., Minasian, R. A., & Caterson, E. J. (2016) · Advances in Wound Care · doi:10.1089/wound.2014.0561 · Cited by 1,008 · see citing works
Myofibroblasts revert to an inactive phenotype during regression of liver fibrosis
Kisseleva, T., Cong, M., Paik, Y., Scholten, D., Jiang, C., Benner, C., Iwaisako, K., Moore-Morris, T., Scott, B., Tsukamoto, H., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1201840109 · Cited by 805 · see citing works
The myofibroblast matrix: implications for tissue repair and fibrosis
Klingberg, F., Hinz, B., & White, E. S. (2013) · The Journal of Pathology · doi:10.1002/path.4104 · Cited by 776 · see citing works
Contraction of Granulation Tissue in vitro: Similarity to Smooth Muscle
Majno, G., Gabbiani, G., Hirschel, B. J., Ryan, G. B., & Statkov, P. R. (1971) · Science · doi:10.1126/science.173.3996.548 · Cited by 567 · see citing works
Type V collagen controls the initiation of collagen fibril assembly
Wenstrup, R. J., Florer, J. B., Brunskill, E. W., Bell, S. M., Chervoneva, I., & Birk, D. E. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m409622200 · Cited by 545 · see citing works
Type V collagen: heterotypic type I/V collagen interactions in the regulation of fibril assembly
Birk, D. E. (2001) · Micron · doi:10.1016/s0968-4328(00)00043-3 · Cited by 429 · see citing works
Revisiting the matricellular concept
Murphy-Ullrich, J. E., & Sage, E. H. (2014) · Matrix Biology · doi:10.1016/j.matbio.2014.07.005 · Cited by 393 · see citing works
Regulation of angiogenesis: Wound healing as a model
EMING, S., BRACHVOGEL, B., ODORISIO, T., & KOCH, M. (2007) · Progress in Histochemistry and Cytochemistry · doi:10.1016/j.proghi.2007.06.001 · Cited by 392 · see citing works
Self-citationFibroblasts in Mechanically Stressed Collagen Lattices Assume a “Synthetic” Phenotype
Kessler, D., Dethlefsen, S., Haase, I., Plomann, M., Hirche, F., Krieg, T., & Eckes, B. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m101602200 · Cited by 369 · see citing works
Tenascin-C drives persistence of organ fibrosis
Bhattacharyya, S., Wang, W., Morales‐Nebreda, L., Feng, G., Wu, M., Zhou, X., Lafyatis, R., Lee, J. J., Hinchcliff, M., Feghali‐Bostwick, C. A., et al. (2016) · Nature Communications · doi:10.1038/ncomms11703 · Cited by 293 · see citing works
Induced expression of syndecan in healing wounds.
Elenius, K., Vainio, S. J., Laato, M. K., Salmivirta, M., Thesleff, I., & Jalkanen, M. (1991) · The Journal of Cell Biology · doi:10.1083/jcb.114.3.585 · Cited by 242 · see citing works
Breitkreutz, D., Koxholt, I., Thiemann, K., & Nischt, R. (2013) · BioMed Research International · doi:10.1155/2013/179784 · Cited by 241 · see citing works
Fibroblast-matrix interactions in wound healing and fibrosis
Eckes, B., Zigrino, P., Kessler, D., Holtkötter, O., Shephard, P., Mauch, C., & Krieg, T. M. (2000) · Matrix Biology · doi:10.1016/s0945-053x(00)00077-9 · Cited by 238 · see citing works
A Novel Marker of Tissue Junctions, Collagen XXII
Koch, M., Schulze, J., Hansen, U. J., Ashwodt, T., Keene, D. R., Brunken, W. J., Burgeson, R. E., Brückner, P., & Bruckner‐Tuderman, L. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m400536200 · Cited by 230 · see citing works
Self-citationType XIV Collagen Regulates Fibrillogenesis
Ansorge, H. L., Meng, X., Zhang, G., Veit, G., Sun, M., Klement, J. F., Beason, D. P., Soslowsky, L. J., Koch, M., & Birk, D. E. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m805582200 · Cited by 195 · see citing works
Self-citationSun, M., Chen, S., Adams, S. M., Florer, J. B., Liu, H., Kao, W. W. ‐., WENSTRUP, R. J., & Birk, D. E. (2011) · Journal of Cell Science · doi:10.1242/jcs.091363 · Cited by 193 · see citing works
The procollagen N-proteinases ADAMTS2, 3 and 14 in pathophysiology
Bekhouche, M., & Colige, A. (2015) · Matrix Biology · doi:10.1016/j.matbio.2015.04.001 · Cited by 163 · see citing works
Mahoney, J. M., Taroni, J., Martyanov, V., Wood, T. A., Greene, C. S., Pioli, P. A., Hinchcliff, M., & Whitfield, M. L. (2015) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1004005 · Cited by 153 · see citing works
Reversible differentiation of myofibroblasts by MyoD
Hecker, L., JAGIRDAR, R. M., Jin, T., & Thannickal, V. J. (2011) · Experimental Cell Research · doi:10.1016/j.yexcr.2011.03.016 · Cited by 153 · see citing works
Agarwal, P., Zwolanek, D., Keene, D. R., Schulz, J.-N., Blumbach, K., Heinegård, D. K., Zaucke, F., Paulsson, M., Krieg, T., Koch, M., et al. (2012) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.335935 · Cited by 150 · see citing works
Self-citationSkin tissue repair: Matrix microenvironmental influences
Wells, A. H., Nuschke, A., & Yates, C. C. (2015) · Matrix Biology · doi:10.1016/j.matbio.2015.08.001 · Cited by 141 · see citing works
Modulation of Lysyl Oxidase-like 2 Enzymatic Activity by an Allosteric Antibody Inhibitor
Rodrı́guez, H. M., Vaysberg, M., Mikels, A. J., McCauley, S., Velayo, A. C., García, C., & Smith, V. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.094136 · Cited by 139 · see citing works
Chen, Y., Shiwen, X., Beek, J. V., Kennedy, L., McLeod, M. R., Renzoni, E. A., Bou–Gharios, G., Wilcox‐Adelman, S. A., Goetinck, P. F., Eastwood, M., et al. (2005) · American Journal Of Pathology · doi:10.1016/s0002-9440(10)61252-7 · Cited by 135 · see citing works
Proteoglycans in Normal and Healing Skin
Smith, M. M., & Melrose, J. (2013) · Advances in Wound Care · doi:10.1089/wound.2013.0464 · Cited by 128 · see citing works
A Peptide Derived from Endostatin Ameliorates Organ Fibrosis
Yamaguchi, Y., Takihara, T., Chambers, R. A., Veraldi, K. L., Larregina, A. T., & Feghali‐Bostwick, C. A. (2012) · Science Translational Medicine · doi:10.1126/scitranslmed.3003421 · Cited by 127 · see citing works
Growth factor pathways in hypertrophic scars: Molecular pathogenesis and therapeutic implications
Lian, N., & Li, T. (2016) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2016.09.010 · Cited by 122 · see citing works
The human lysyl oxidase-like 2 protein functions as an amine oxidase toward collagen and elastin
Kim, Y.-M., Kim, Y., & Kim, Y. (2010) · Molecular Biology Reports · doi:10.1007/s11033-010-0088-0 · Cited by 116 · see citing works
Toriseva, M., Laato, M. K., Carpén, O., Ruohonen, S. T., Savontaus, E., Inada, M., Krane, S. M., & Kähäri, V. (2012) · PLoS ONE · doi:10.1371/journal.pone.0042596 · Cited by 115 · see citing works
Joannes, A., Brayer, S., Besnard, V., Marchal-Sommé, J., Jaillet, M., Mordant, P., Mal, H., Borie, R., Crestani, B., & Mailleux, A. (2016) · American Journal of Physiology-Lung Cellular and Molecular Physiology · doi:10.1152/ajplung.00185.2015 · Cited by 115 · see citing works
The role of thrombospondins in wound healing, ischemia, and the foreign body reaction
Kyriakides, T. R., & MacLauchlan, S. (2009) · Journal of Cell Communication and Signaling · doi:10.1007/s12079-009-0077-z · Cited by 112 · see citing works
Fibroblast growth factor‐1 attenuates TGF ‐β1‐induced lung fibrosis
Shimbori, C., Bellaye, P., Jiaji, X., Gauldie, J., Ask, K., Ramos, C., Becerril, C., Pardo, A., Selman, M., & Kolb, M. R. J. (2016) · The Journal of Pathology · doi:10.1002/path.4768 · Cited by 106 · see citing works
Lysyl Oxidase-like-2 Cross-links Collagen IV of Glomerular Basement Membrane
Añazco, C. C., Jiménez, A. J. L., Rafi, M., Vega‐Montoto, L., Zhang, M., Hudson, B. G., & Vanacore, R. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m116.738856 · Cited by 97 · see citing works
Vyalov, S., Desmoulière, A., & Gabbiani, G. (1993) · Virchows Archiv B Cell Pathology Including Molecular Pathology · doi:10.1007/bf02899267 · Cited by 91 · see citing works
The role of biophysical properties of provisional matrix proteins in wound repair
Chester, D., & Brown, A. C. (2016) · Matrix Biology · doi:10.1016/j.matbio.2016.08.004 · Cited by 91 · see citing works
Chen, J., Lin, B., Hu, H., Lin, C., Jin, W., Zhang, F., Zhu, Y.-A., Lu, C., Wei, X., & Chen, R. (2014) · BioMed Research International · doi:10.1155/2014/547187 · Cited by 89 · see citing works
Awwad, K., Hu, J., Shi, L., Mangels, N., Abdel Malik, R., Zippel, N., Fisslthaler, B., Eble, J. A., Pfeilschifter, J., Popp, R., et al. (2015) · Cardiovascular Research · doi:10.1093/cvr/cvv098 · Cited by 77 · see citing works
Toyoda, M., Takayama, H., Horiguchi, N., Otsuka, T., Fukusato, T., Merlino, G. T., Takagi, H., & Mori, M. (2001) · FEBS Letters · doi:10.1016/s0014-5793(01)03126-x · Cited by 77 · see citing works
Martin, P., Teodoro, W. R., Velosa, A. P. P., de Morais, J., Carrasco, S., Christmann, R., Goldenstein‐Schainberg, C., Parra, E. R., Katayama, M. L. H., Sotto, M. N., et al. (2012) · Autoimmunity Reviews · doi:10.1016/j.autrev.2012.02.017 · Cited by 77 · see citing works
Focal Adhesions in (Myo)fibroblasts Scaffold Adenylyl Cyclase with Phosphorylated Caveolin
Swaney, J. S., Patel, H. H., Yokoyama, U., Head, B. P., Roth, D. M., & Insel, P. A. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m513097200 · Cited by 72 · see citing works
Lee, J.-E., & Kim, Y. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m600977200 · Cited by 70 · see citing works
Seppinen, L., Sormunen, R. T., Soini, Y., Elamaa, H. P., Heljäsvaara, R., & Pihlajaniemi, T. A. (2008) · Matrix Biology · doi:10.1016/j.matbio.2008.03.003 · Cited by 67 · see citing works
BMP1-like proteinases are essential to the structure and wound healing of skin
Muir, A. M., Massoudi, D., Nguyen, N. T., Keene, D. R., Lee, S., Birk, D. E., Davidson, J. M., Marinkovich, M. P., & Greenspan, D. S. (2016) · Matrix Biology · doi:10.1016/j.matbio.2016.06.004 · Cited by 66 · see citing works
Skrbic, B., Engebretsen, K. V. T., Strand, M. E., et al. (2015) · Cardiovascular Research · doi:10.1093/cvr/cvv041 · Cited by 62 · see citing works
Expression and Supramolecular Assembly of Recombinant α1(VIII) and α2(VIII) Collagen Homotrimers
Stephan, S., Sherratt, M. J., Hodson, N. W., et al. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m305805200 · Cited by 60 · see citing works
Wang, W., Olson, D., Liang, G., Franceschi, R. T., Li, C., Wang, B. J., Wang, S. S., & Yang, S. (2012) · International Journal of Biological Sciences · doi:10.7150/ijbs.5136 · Cited by 59 · see citing works
SMOC1 is a tenascin-C interacting protein over-expressed in brain tumors
Brellier, F., Ruggiero, S., Zwolanek, D., Martina, E., Heß, D., Brown-Luedi, M., Hartmann, U., Koch, M., Merlo, A., Lino, M. M., et al. (2011) · Matrix Biology · doi:10.1016/j.matbio.2011.02.001 · Cited by 55 · see citing works
Self-citationCipriani, P., Benedetto, P. D., Ruscitti, P., Liakouli, V., Berardicurti, O., Carubbi, F., Ciccia, F., Guggino, G., Zazzeroni, F., Alesse, E., et al. (2016) · The Journal of Rheumatology · doi:10.3899/jrheum.150996 · Cited by 51 · see citing works
Lettmann, S., Bloch, W., Maaß, T., Niehoff, A., Schulz, J.-N., Eckes, B., Eming, S., Bonaldo, P., Paulsson, M., & Wagener, R. (2014) · PLoS ONE · doi:10.1371/journal.pone.0105686 · Cited by 49 · see citing works
Collagen XXIII, Novel Ligand for Integrin α2β1 in the Epidermis
Veit, G., Zwolanek, D., Eckes, B., Niland, S., Käpylä, J., Zweers, M. C., Ishida‐Yamamoto, A., Krieg, T., Heino, J., Eble, J. A., et al. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m111.220046 · Cited by 47 · see citing works
Self-citationHeterogeneity of Collagen VI Microfibrils
Maaß, T., Bayley, C. P., Mörgelin, M., Lettmann, S., Bonaldo, P., Paulsson, M., Baldock, C., & Wagener, R. (2016) · Journal of Biological Chemistry · doi:10.1074/jbc.m115.705160 · Cited by 30 · see citing works
Jurjus, R. A., Liu, Y., Pal‐Ghosh, S., et al. (2008) · Wound Repair and Regeneration · doi:10.1111/j.1524-475x.2008.00423.x · Cited by 28 · see citing works
PECAM1+/Sca1+/CD38+ Vascular Cells Transform into Myofibroblast-Like Cells in Skin Wound Repair
Etich, J., Bergmeier, V., Frie, C., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0053262 · Cited by 27 · see citing works
Self-citationEtich, J., Bergmeier, V., Pitzler, L., & Brachvogel, B. (2016) · Connective Tissue Research · doi:10.1080/03008207.2016.1210606 · Cited by 25 · see citing works
Self-citationKosla, J., Dvořák, M., & Čermák, V. (2012) · Gene · doi:10.1016/j.gene.2012.10.069 · Cited by 24 · see citing works
Opposing effects of collagen I and vitronectin on fibronectin fibril structure and function
Gildner, C. D., Roy, D. C., Farrar, C. S., & Hocking, D. C. (2014) · Matrix Biology · doi:10.1016/j.matbio.2014.01.017 · Cited by 23 · see citing works
Kreft, S., Klatt, A. R., Straßburger, J., Pöschl, E., Flower, R., Eming, S. A., Reutelingsperger, C. P. M., Brisson, A. R., & Brachvogel, B. (2016) · Cells Tissues Organs · doi:10.1159/000445106 · Cited by 14 · see citing works
Self-citationGeneration and characterization of SMAA-GFP mice
Tsai, J. –., Yu, Z., Wawrousek, E. F., et al. (2001) · Investigative Ophthalmology & Visual Science · Cited by 5 · see citing works
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Fibrosis: from mechanisms to medicines
Henderson, N. C., Rieder, F., & Wynn, T. A. (2020) · Nature · doi:10.1038/s41586-020-2938-9 · Cited by 1,868 · see citing works
- Authors
- Bergmeier, V., Etich, J., Pitzler, L., Frie, C., Koch, M., Fischer, M., Rappl, G., Abken, H., Tomasek, J. J., & Brachvogel, B.
- Affiliations
- University of Cologne (DE)
- University of Oklahoma Health Sciences Center (US)
- Corresponding author
- Brachvogel, Bent
- ORCID
- Venue
- Matrix Biology
- Publisher
- Elsevier BV
- Published
- 2018-01
- Volume
- 65
- Pages
- 59-74
- ISSN
- 0945-053X (ISSN-L)
- OpenAlex
- W2742741708
- Cited by
- 87
- References
- 65
- Citations by year
- 2026: 4 · 2025: 7 · 2024: 21 · 2023: 10 · 2022: 16 · 2021: 10 · 2020: 10 · 2019: 5 · 2018: 4
- FWCI
- 4.94
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Matrix Biology (publishedVersion)
- PubMed (publishedVersion)
- Kölner Universitäts PublikationsServer (Universität zu Köln) (publishedVersion)
- Funders
- Bladder Cancer Advocacy Network
- Deutsche Forschungsgemeinschaft
- Topics
- Health Sciences › Medicine › Rehabilitation › Wound Healing and Treatments
- Health Sciences › Medicine › Dermatology › Dermatologic Treatments and Research
- Health Sciences › Medicine › Hepatology › Liver physiology and pathology
- Keywords
- myofibroblasts, skin wound healing, gene expression signatures, extracellular matrix, matrisome, fibrosis, granulation tissue, fibroblast recruitment, G protein-coupled receptor signaling, extracellular matrix deposition
- MeSH terms
- Actins, Animals, Cell Differentiation, Disease Models, Animal, Gene Expression Regulation, Mice, Transgenic, Organ Specificity, Skin, Oligonucleotide Array Sequence Analysis, Gene Expression Profiling, Mice, Gene Regulatory Networks, Myofibroblasts
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