The DOI matches its Crossref record; 11 of the 11 references it cites were found in a registry or an index.
Hsp90-Cdc37 Chaperone Complex Regulates Ulk1- and Atg13-Mediated Mitophagy
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
GCA inhibits K48-linked ubiquitination and activates TRAF6-dependent K63-linked ubiquitination of ULK1 to induce autophagy.
“GCA (grancalcin) inhibits K48-linked ubiquitination and activates TRAF6dependent K63-linked ubiquitination of ULK1 to induce autophagy [647].”
From Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1 (2021) · cites this paper as [647]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
1 retracted
Mitochondrial Autophagy Is an HIF-1-dependent Adaptive Metabolic Response to Hypoxia
Zhang, H., Bosch-Marce, M., Shimoda, L. A., Tan, Y. S., Baek, J. H., Wesley, J. B., Gonzalez, F. J., & Semenza, G. L. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m800102200 · Cited by 1,601
RetractedParkin is recruited selectively to impaired mitochondria and promotes their autophagy
Narendra, D., Tanaka, A., Suen, D.-F., & Youle, R. J. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200809125 · Cited by 4,026
Self-citationPINK1 Is Selectively Stabilized on Impaired Mitochondria to Activate Parkin
Narendra, D. P., Jin, S. M., Tanaka, A., Suen, D.-F., Gautier, C. A., Shen, J., Cookson, M. R., & Youle, R. J. (2010) · PLoS Biology · doi:10.1371/journal.pbio.1000298 · Cited by 2,944
Self-citationPINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1
Geisler, S., Holmström, K. M., Skujat, D., Fiesel, F. C., Rothfuss, O. C., Kahle, P. J., & Springer, W. (2010) · Nature Cell Biology · doi:10.1038/ncb2012 · Cited by 2,835
HSP90 and the chaperoning of cancer
Whitesell, L., & Lindquist, S. L. (2005) · Nature Reviews Cancer · doi:10.1038/nrc1716 · Cited by 2,502
Ravikumar, B., Vacher, C., Berger, Z., Davies, J. E., Luo, S., Oroz, L. G., Scaravilli, F., Easton, D. F., Duden, R., O'Kane, C. J., et al. (2004) · Nature Genetics · doi:10.1038/ng1362 · Cited by 2,347
Nutrient-dependent mTORC1 Association with the ULK1–Atg13–FIP200 Complex Required for Autophagy
Hosokawa, N., Hara, T., Kaizuka, T., Kishi, C., Takamura, A., Miura, Y., Iemura, S.-I., Natsume, T., Takehana, K., Yamada, N., et al. (2009) · Molecular Biology of the Cell · doi:10.1091/mbc.e08-12-1248 · Cited by 2,076
Familial Parkinson disease gene product, parkin, is a ubiquitin-protein ligase
Shimura, H., Hattori, N., Kubo, S.-I., Mizuno, Y., Asakawa, S., Minoshima, S., Shimizu, N., Iwai, K., Chiba, T., Tanaka, K., et al. (2000) · Nature Genetics · doi:10.1038/77060 · Cited by 2,024 · cited 2×
“The Hsp90-Cdc37 Chaperone Complex and Ulk1 Are Essential for Clearance of Depolarized Mitochondria Disease-associated mutations in PARK2 (Abbas et al., 1999; Shimura et al., 2000), the gene encoding the E3 ligase Parkin, impair the elimination of damaged mitochondria (Geisler et al.”
Selective degradation of mitochondria by mitophagy
Kim, I., Rodriguez-Enriquez, S., & Lemasters, J. J. (2007) · Archives of Biochemistry and Biophysics · doi:10.1016/j.abb.2007.03.034 · Cited by 1,558
The role of the Atg1/ULK1 complex in autophagy regulation
Mizushima, N. (2010) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2009.12.004 · Cited by 1,062
Tresse, E., Salomons, F. A., Vesa, J., Bott, L. C., Kimonis, V., Yao, T.-P., Dantuma, N. P., & Taylor, J. P. (2010) · Autophagy · doi:10.4161/auto.6.2.11014 · Cited by 437
Flagged first, then by citations
Research works printed but not linked: 48
- Abbas, 1999, A wide variety of mutations in the parkin gene are responsible for autosomal recessive parkinsonism in Europe. French Parkinson's Disease Genetics Study Group and the European Consortium on Genetic Susceptibility in Parkinson's Disease, Hum. Mol. Genet., 8, 567, 10.1093/hmg/8.4.567 · DOI
- Amanchy, 2005, Stable isotope labeling with amino acids in cell culture (SILAC) for studying dynamics of protein abundance and posttranslational modifications, Sci. STKE, 2005, pl2, 10.1126/stke.2672005pl2 · DOI
- Amaravadi, 2007, The roles of therapy-induced autophagy and necrosis in cancer treatment, Clin. Cancer Res., 13, 7271, 10.1158/1078-0432.CCR-07-1595 · DOI
- Amaravadi, 2007, Autophagy inhibition enhances therapy-induced apoptosis in a Myc-induced model of lymphoma, J. Clin. Invest., 117, 326, 10.1172/JCI28833 · DOI
- Basso, 2002, Akt forms an intracellular complex with heat shock protein 90 (Hsp90) and Cdc37 and is destabilized by inhibitors of Hsp90 function, J. Biol. Chem., 277, 39858, 10.1074/jbc.M206322200 · DOI · Paper page
- Behrends, 2010, Network organization of the human autophagy system, Nature, 466, 68, 10.1038/nature09204 · DOI · Paper page
- Bhatia-Kissova, 2010, Mitophagy in yeast: actors and physiological roles, FEM. Yeast Res., 10, 1023, 10.1111/j.1567-1364.2010.00659.x · DOI
- Caplan, 2007, Molecular chaperones and protein kinase quality control, Trends Cell Biol., 17, 87, 10.1016/j.tcb.2006.12.002 · DOI
- Chan, 2007, siRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy, J. Biol. Chem., 282, 25464, 10.1074/jbc.M703663200 · DOI · Paper page
- Chan, 2009, Kinase-inactivated ULK proteins inhibit autophagy via their conserved C-terminal domains using an Atg13-independent mechanism, Mol. Cell. Biol., 29, 157, 10.1128/MCB.01082-08 · DOI · Paper page
- Criollo, 2010, The IKK complex contributes to the induction of autophagy, EMBO J., 29, 619, 10.1038/emboj.2009.364 · DOI
- de Moura, 2010, Mitochondrial dysfunction in neurodegenerative diseases and cancer, Environ. Mol. Mutagen., 51, 391, 10.1002/em.20575 · DOI
- Dorsey, 2009, Mapping the phosphorylation sites of Ulk1, J. Proteome Res., 8, 5253, 10.1021/pr900583m · DOI · Paper page
- Dorsey, 2009, Monitoring the autophagy pathway in cancer, Methods Enzymol., 453, 251, 10.1016/S0076-6879(08)04012-3 · DOI
- Egan, 2010, Phosphorylation of ULK1 (hATG1) by AMP-activated protein kinase connects energy sensing to mitophagy, Science, 331, 456, 10.1126/science.1196371 · DOI · Paper page
- Gamboa, 2010, Mitochondrial content and distribution changes specific to mouse diaphragm after chronic normobaric hypoxia, Am. J. Physiol. Regul. Integr. Comp. Physiol., 298, R575, 10.1152/ajpregu.00320.2009 · DOI
- Gottlieb, 2010, Autophagy in health and disease. 5. Mitophagy as a way of life, Am. J. Physiol. Cell Physiol., 299, C203, 10.1152/ajpcell.00097.2010 · DOI
- Gray, 2007, Targeting Cdc37 inhibits multiple signaling pathways and induces growth arrest in prostate cancer cells, Cancer Res., 67, 11942, 10.1158/0008-5472.CAN-07-3162 · DOI
- Hartson, 2000, p50(cdc37) is a nonexclusive Hsp90 cohort which participates intimately in Hsp90-mediated folding of immature kinase molecules, Biochemistry, 39, 7631, 10.1021/bi000315r · DOI
- Jung, 2009, ULK-Atg13-FIP200 complexes mediate mTOR signaling to the autophagy machinery, Mol. Biol. Cell, 20, 1992, 10.1091/mbc.e08-12-1249 · DOI · Paper page
- Kang, 2007, Regulation of tumor cell mitochondrial homeostasis by an organelle-specific Hsp90 chaperone network, Cell, 131, 257, 10.1016/j.cell.2007.08.028 · DOI
- Kanki, 2010, The molecular mechanism of mitochondria autophagy in yeast, Mol. Microbiol., 75, 795, 10.1111/j.1365-2958.2009.07035.x · DOI · Paper page
- Kanki, 2009, A genomic screen for yeast mutants defective in selective mitochondria autophagy, Mol. Biol. Cell, 20, 4730, 10.1091/mbc.e09-03-0225 · DOI · Paper page
- Kundu, 2008, Autophagy: basic principles and relevance to disease, Annu. Rev. Pathol., 3, 427, 10.1146/annurev.pathmechdis.2.010506.091842 · DOI · Paper page
- Kundu, 2008, Ulk1 plays a critical role in the autophagic clearance of mitochondria and ribosomes during reticulocyte maturation, Blood, 112, 1493, 10.1182/blood-2008-02-137398 · DOI
- Lee, 2010, Disease-causing mutations in parkin impair mitochondrial ubiquitination, aggregation, and HDAC6-dependent mitophagy, J. Cell Biol., 189, 671, 10.1083/jcb.201001039 · DOI
- Li, 2009, New developments in Hsp90 inhibitors as anti-cancer therapeutics: mechanisms, clinical perspective and more potential, Drug Resist. Updat., 12, 17, 10.1016/j.drup.2008.12.002 · DOI
- Lin, 2008, Characterization of PINK1 processing, stability, and subcellular localization, J. Neurochem., 106, 464, 10.1111/j.1471-4159.2008.05398.x · DOI
- Liu, 2010, Heat stroke induces autophagy as a protection mechanism against neurodegeneration in the brain, Shock, 34, 643, 10.1097/SHK.0b013e3181e761c1 · DOI
- Livesey, 2009, Autophagy inhibition in combination cancer treatment, Curr. Opin. Investig. Drugs, 10, 1269
- Maclean, 2008, Targeting lysosomal degradation induces p53-dependent cell death and prevents cancer in mouse models of lymphomagenesis, J. Clin. Invest., 118, 79, 10.1172/JCI33700 · DOI
- Margineantu, 2007, Hsp90 inhibition decreases mitochondrial protein turnover, PLoS ONE, 2, e1066, 10.1371/journal.pone.0001066 · DOI · Paper page
- Moriwaki, 2008, L347P PINK1 mutant that fails to bind to Hsp90/Cdc37 chaperones is rapidly degraded in a proteasome-dependent manner, Neurosci. Res., 61, 43, 10.1016/j.neures.2008.01.006 · DOI
- Oberley, 2008, Aging results in increased autophagy of mitochondria and protein nitration in rat hepatocytes following heat stress, J. Histochem. Cytochem., 56, 615, 10.1369/jhc.2008.950873 · DOI
- Ohji, 2006, Suppression of the mTOR-raptor signaling pathway by the inhibitor of heat shock protein 90 geldanamycin, J. Biochem., 139, 129, 10.1093/jb/mvj008 · DOI
- Okamoto, 2009, Mitochondria-anchored receptor Atg32 mediates degradation of mitochondria via selective autophagy, Dev. Cell, 17, 87, 10.1016/j.devcel.2009.06.013 · DOI · Paper page
- Pearl, 2006, Structure and mechanism of the Hsp90 molecular chaperone machinery, Annu. Rev. Biochem., 75, 271, 10.1146/annurev.biochem.75.103004.142738 · DOI · Paper page
- Perkins, 1999, Probability-based protein identification by searching sequence databases using mass spectrometry data, Electrophoresis, 20, 3551, 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2 · DOI
- Pfaffl, 2001, A new mathematical model for relative quantification in real-time RT-PCR, Nucleic Acids Res., 29, 2002, 10.1093/nar/29.9.e45 · DOI · Paper page
- Qing, 2006, Hsp90 inhibition results in autophagy-mediated proteasome-independent degradation of IkappaB kinase (IKK), Cell Res., 16, 895, 10.1038/sj.cr.7310109 · DOI
- Siegelin, 2010, Global targeting of subcellular heat shock protein-90 networks for therapy of glioblastoma, Mol. Cancer Ther., 9, 1638, 10.1158/1535-7163.MCT-10-0097 · DOI
- Smith, 2009, Silencing the cochaperone CDC37 destabilizes kinase clients and sensitizes cancer cells to HSP90 inhibitors, Oncogene, 28, 157, 10.1038/onc.2008.380 · DOI
- Stipanuk, 2009, Macroautophagy and its role in nutrient homeostasis, Nutr. Rev., 67, 677, 10.1111/j.1753-4887.2009.00252.x · DOI
- Strader, 2006, Efficient and specific trypsin digestion of microgram to nanogram quantities of proteins in organic-aqueous solvent systems, Anal. Chem., 78, 125, 10.1021/ac051348l · DOI
- Vives-Bauza, 2010, PINK1-dependent recruitment of Parkin to mitochondria in mitophagy, Proc. Natl. Acad. Sci. USA, 107, 378, 10.1073/pnas.0911187107 · DOI · Paper page
- Weihofen, 2008, Pink1 Parkinson mutations, the Cdc37/Hsp90 chaperones and Parkin all influence the maturation or subcellular distribution of Pink1, Hum. Mol. Genet., 17, 602, 10.1093/hmg/ddm334 · DOI
- Yan, 1998, Identification of mouse ULK1, a novel protein kinase structurally related to C. elegans UNC-51, Biochem. Biophys. Res. Commun., 246, 222, 10.1006/bbrc.1998.8546 · DOI
- Yoshimori, 1991, Bafilomycin A1, a specific inhibitor of vacuolar-type H(+)-ATPase, inhibits acidification and protein degradation in lysosomes of cultured cells, J. Biol. Chem., 266, 17707, 10.1016/S0021-9258(19)47429-2 · DOI
Cited by
Sorted by citations
Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Klionsky, D. J., Abdelmohsen, K., Abe, A., Abedin, M. J., Abeliovich, H., Acevedo Arozena, A., Adachi, H., Adams, C. M., Adams, P. D., Adeli, K., et al. (2016) · Autophagy · doi:10.1080/15548627.2015.1100356 · Cited by 5,894
Self-citationGuidelines for the use and interpretation of assays for monitoring autophagy
Klionsky, D. J., Abdalla, F. C., Abeliovich, H., Abraham, R. T., Acevedo-Arozena, A., Adeli, K., Agholme, L., Agnello, M., Agostinis, P., Aguirre-Ghiso, J. A., et al. (2012) · Autophagy · doi:10.4161/auto.19496 · Cited by 3,996
Self-citationGuidelines for the use and interpretation of assays for monitoring autophagy (4th edition) 1
Klionsky, D. J., Abdel-Aziz, A. K., Abdelfatah, S., Abdellatif, M., Abdoli, A., Abel, S., Abeliovich, H., Abildgaard, M. H., Abudu, Y. P., Acevedo-Arozena, A., et al. (2021) · Autophagy · doi:10.1080/15548627.2020.1797280 · Cited by 2,897
Self-citationThe pathways of mitophagy for quality control and clearance of mitochondria
Ashrafi, G., & Schwarz, T. L. (2013) · Cell Death & Differentiation · doi:10.1038/cdd.2012.81 · Cited by 1,900
Role of AMPK-mTOR-Ulk1/2 in the regulation of autophagy: cross talk, shortcuts, and feedbacks
Alers, S., Löffler, A. S., Wesselborg, S., & Stork, B. (2012) · Molecular and Cellular Biology · doi:10.1128/mcb.06159-11 · Cited by 1,483
Mitophagy: mechanisms, pathophysiological roles, and analysis
Ding, W.-X., & Yin, X.-M. (2012) · bchm · doi:10.1515/hsz-2012-0119 · Cited by 1,032
The mammalian ULK1 complex and autophagy initiation
Zachari, M., & Ganley, I. G. (2017) · Essays in Biochemistry · doi:10.1042/ebc20170021 · Cited by 789
Mitochondria: diversity in the regulation of the NLRP3 inflammasome
Gurung, P., Lukens, J. R., & Kanneganti, T.-D. (2015) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2014.11.008 · Cited by 393
Lupfer, C., Thomas, P. G., Anand, P. K., Vogel, P., Milasta, S., Martinez, J., Huang, G., Green, M., Kundu, M., Chi, H., et al. (2013) · Nature Immunology · doi:10.1038/ni.2563 · Cited by 384
Self-citationPark, J.-M., Jung, C. H., Seo, M., Otto, N. M., Grunwald, D., Kim, K. H., Moriarity, B., Kim, Y.-M., Starker, C., Nho, R. S., et al. (2016) · Autophagy · doi:10.1080/15548627.2016.1140293 · Cited by 341
Self-citationULK1 phosphorylates Ser30 of BECN1 in association with ATG14 to stimulate autophagy induction
Park, J.-M., Seo, M., Jung, C. H., Grunwald, D., Stone, M., Otto, N. M., Toso, E., Ahn, Y., Kyba, M., Griffin, T. J., et al. (2018) · Autophagy · doi:10.1080/15548627.2017.1422851 · Cited by 168
Self-citationSingh, B. K., Sinha, R. A., Tripathi, M., Mendoza, A., Ohba, K., Sy, J. A. C., Xie, S. Y., Zhou, J., Ho, J. P., Chang, C.-Y., et al. (2018) · Science Signaling · doi:10.1126/scisignal.aam5855 · Cited by 145
CCCP induces autophagy in an AMPK-independent manner
Kwon, K.-Y., Viollet, B., & Yoo, O. J. (2011) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2011.11.038 · Cited by 55
Metadata
- Authors
- Joo, J. H., Dorsey, F. C., Joshi, A., Hennessy-Walters, K. M., Rose, K. L., McCastlain, K., Zhang, J., Iyengar, R., Jung, C. H., Suen, D.-F., Steeves, M. A., Yang, C.-Y., Prater, S. M., Kim, D.-H., Thompson, C. B., Youle, R. J., Ney, P. A., Cleveland, J. L., & Kundu, M.
- Venue
- Molecular Cell
- Publisher
- Elsevier BV
- Published
- 2011-08
- Volume
- 43
- Issue
- 4
- Pages
- 572-585
- ISSN
- 1097-2765
- PMC
- PMC3485687
- Cited by
- 232
- References
- 11
- Language
- en
- Licence
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- www.elsevier.com/legal/tdmrep-license (tdm)
- www.elsevier.com/open-access/userlicense/1.0/ (vor, 752 d)
- doi.org/10.15223/policy-017 (stm-asf)
- doi.org/10.15223/policy-037 (stm-asf)
- doi.org/10.15223/policy-012 (stm-asf)
- doi.org/10.15223/policy-029 (stm-asf)
- doi.org/10.15223/policy-004 (stm-asf)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review