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Cited by 194Pharmaceutical and Antibiotic Environmental ImpactsAntibiotic Use and ResistanceAntibiotic Resistance in Bacteria

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Antibiotic resistance in urban runoff

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Almakki, Ayad, Jumas-Bilak, Estelle, Marchandin, Hélène, Licznar-Fajardo, Patricia·2019·Science of The Total Environment
DOI 10.1016/j.scitotenv.2019.02.183
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Abstract

Aquatic ecosystems subjected to anthropogenic pressures are places of rapid evolution of microbial communities and likely hotspots for selection and emergence of antibiotic resistant bacteria. In urban settings, water quality and the risk of infection are generally assessed in sewers and in effluents of wastewater treatment plants. Physical and chemical parameters as well as the presence of antibiotics, antibiotic-resistant bacteria and genes of resistance are driven by urban activities, with adverse effects on aquatic ecosystems. In this paper we review the environmental pressures exerted on bacterial communities in urban runoff waters and discuss the impact of these settings on antibiotic resistance. Considering the worrisome epidemiology of infectious diseases and estimated mortality due to antimicrobial resistance in the coming decades, there is an urgent need to identify all environmental reservoirs of resistant bacteria and resistance genes to complete our knowledge of the epidemiological cycle and of the dynamics of urban antibiotic resistance.

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Research works printed but not linked: 176

  1. Abia, 2015, High prevalence of multiple-antibiotic-resistant (MAR) Escherichia coli in river bed sediments of the Apies River, South Africa, Environ. Monit. Assess., 187, 652, 10.1007/s10661-015-4879-6 · DOI
  2. Abraham, 2011, Megacities as sources for pathogenic bacteria in rivers and their fate downstream [WWW document], Int. J. Microbiol., 10.1155/2011/798292 · DOI
  3. Adeniyi, 2005, The physico-chemical and bacteriological quality of rainwater collected over different roofing materials in Ile-Ife, southwestern Nigeria, Chem. Ecol., 21, 149, 10.1080/02757540500117318 · DOI
  4. Allen, 2010, Call of the wild: antibiotic resistance genes in natural environments, Nat. Rev. Microbiol., 8, 251, 10.1038/nrmicro2312 · DOI · Paper page
  5. Almakki, 2017, A new methodology to assess antimicrobial resistance of bacteria in coastal waters; pilot study in a Mediterranean hydrosystem, Compt. Rendus Geosci., 349, 310, 10.1016/j.crte.2017.09.009 · DOI
  6. Almakki, 2017, NDM-5-producing Escherichia coli in an urban river in Montpellier, France, Int. J. Antimicrob. Agents, 50, 123, 10.1016/j.ijantimicag.2017.04.003 · DOI
  7. Alonso, 1999, Environmental and clinical isolates of Pseudomonas aeruginosa show pathogenic and biodegradative properties irrespective of their origin, Environ. Microbiol., 1, 421, 10.1046/j.1462-2920.1999.00052.x · DOI
  8. Amos, 2018, The widespread dissemination of integrons throughout bacterial communities in a riverine system, ISME J., 12, 681, 10.1038/s41396-017-0030-8 · DOI
  9. Andersson, 2017, Selection and transmission of antibiotic-resistant bacteria, Microbiol. Spectr., 5, 10.1128/microbiolspec.MTBP-0013-2016 · DOI
  10. Bäckström, 2003, Speciation of heavy metals in road runoff and roadside total deposition, Water Air Soil Pollut., 147, 343, 10.1023/A:1024545916834 · DOI
  11. Baggs, 2016, Estimating national trends in inpatient antibiotic use among US hospitals from 2006 to 2012, JAMA Intern. Med., 176, 1639, 10.1001/jamainternmed.2016.5651 · DOI
  12. Bai, 2005, Modeling sediment impact on the transport of fecal bacteria, Water Res., 39, 5232, 10.1016/j.watres.2005.10.013 · DOI
  13. Bajaj, 2016, Quinolone co-resistance in ESBL- or AmpC-producing Escherichia coli from an Indian urban aquatic environment and their public health implications, Environ. Sci. Pollut. Res. Int., 23, 1954, 10.1007/s11356-015-5609-x · DOI
  14. Baker-Austin, 2006, Co-selection of antibiotic and metal resistance, Trends Microbiol., 14, 176, 10.1016/j.tim.2006.02.006 · DOI
  15. Baquero, 2008, Antibiotics and antibiotic resistance in water environments, Curr. Opin. Biotechnol., 19, 260, 10.1016/j.copbio.2008.05.006 · DOI
  16. Bernier, 2013, Concentration-dependent activity of antibiotics in natural environments, Front. Microbiol., 4, 20, 10.3389/fmicb.2013.00020 · DOI
  17. Blázquez, 2002, Mutation and evolution of antibiotic resistance: antibiotics as promoters of antibiotic resistance?, Curr. Drug Targets, 3, 345, 10.2174/1389450023347579 · DOI
  18. Brito, 2015, Impact of hydrocarbons, PCBs and heavy metals on bacterial communities in Lerma River, Salamanca, Mexico: Investigation of hydrocarbon degradation potential, Sci. Total Environ., 521–522, 1, 10.1016/j.scitotenv.2015.02.098 · DOI
  19. Brown-Jaque, 2018, Antibiotic resistance genes in phage particles isolated from human faeces and induced from clinical bacterial isolates, Int. J. Antimicrob. Agents, 51, 434, 10.1016/j.ijantimicag.2017.11.014 · DOI
  20. Buffet-Bataillon, 2016, Efflux pump induction by quaternary ammonium compounds and fluoroquinolone resistance in bacteria, Future Microbiol, 11, 81, 10.2217/fmb.15.131 · DOI
  21. Caniça, 2015, Current perspectives on the dynamics of antibiotic resistance in different reservoirs, Res. Microbiol., 166, 594, 10.1016/j.resmic.2015.07.009 · DOI
  22. Cann, 2013, Extreme water-related weather events and waterborne disease, Epidemiol. Infect., 141, 671, 10.1017/S0950268812001653 · DOI
  23. Cantas, 2013, A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota, Front. Microbiol., 4, 96, 10.3389/fmicb.2013.00096 · DOI
  24. Carraro, 2016, Hospital effluents management: chemical, physical, microbiological risks and legislation in different countries, J. Environ. Manag., 168, 185, 10.1016/j.jenvman.2015.11.021 · DOI
  25. Carstens, 2014, Antibiotic-resistant heterotrophic plate count bacteria and amoeba-resistant bacteria in aquifers of the Mooi River, North West province, South Africa, J. Water Health, 12, 835, 10.2166/wh.2014.226 · DOI
  26. Cattoir, 2008, Unexpected occurrence of plasmid-mediated quinolone resistance determinants in environmental Aeromonas spp, Emerg. Infect. Dis., 14, 231, 10.3201/eid1402.070677 · DOI
  27. Charrois, 2004, Disinfection by-products in small Alberta community drinking-water supplies, J. Toxic. Environ. Health A, 67, 1797, 10.1080/15287390490492494 · DOI
  28. Charuaud, 2019, Veterinary pharmaceutical residues from natural water to tap water: sales, occurrence and fate, J. Hazard. Mater., 361, 169, 10.1016/j.jhazmat.2018.08.075 · DOI
  29. Chen, 2009, Influence of nitrogen source on NDMA formation during chlorination of diuron, Water Res., 43, 3047, 10.1016/j.watres.2009.04.020 · DOI
  30. Chen, 2013, Differentiating anthropogenic impacts on ARGs in the Pearl River estuary by using suitable gene indicators, Water Res., 47, 2811, 10.1016/j.watres.2013.02.042 · DOI
  31. Chen, 2016, Comparative analysis of water quality and toxicity assessment methods for urban highway runoff, Sci. Total Environ., 553, 519, 10.1016/j.scitotenv.2016.02.143 · DOI
  32. Converse, 2011, Contrasts in concentrations and loads of conventional and alternative indicators of fecal contamination in coastal stormwater, Water Res., 45, 5229, 10.1016/j.watres.2011.07.029 · DOI
  33. Costerton, 1995, Microbial biofilms, Annu. Rev. Microbiol., 49, 711, 10.1146/annurev.mi.49.100195.003431 · DOI
  34. Curriero, 2001, The association between extreme precipitation and waterborne disease outbreaks in the United States, 1948-1994, Am. J. Public Health, 91, 1194, 10.2105/AJPH.91.8.1194 · DOI
  35. Daughton, 1999, Pharmaceuticals and personal care products in the environment: agents of subtle change?, Environ. Health Perspect., 107, 907, 10.1289/ehp.99107s6907 · DOI
  36. Davoren, 2005, Ecotoxicological evaluation of the biocidal agents sodium o-phenylphenol, sodium o-benzyl-p-chlorophenol, and sodium p-tertiary amylphenol, Ecotoxicol. Environ. Saf., 60, 203, 10.1016/j.ecoenv.2004.04.004 · DOI
  37. D'Costa, 2007, Expanding the soil antibiotic resistome: exploring environmental diversity, Curr. Opin. Microbiol., 10, 481, 10.1016/j.mib.2007.08.009 · DOI
  38. de Man, 2014, Quantitative assessment of infection risk from exposure to waterborne pathogens in urban floodwater, Water Res., 48, 90, 10.1016/j.watres.2013.09.022 · DOI
  39. Degirmenci, 2000, Genotoxicity and estrogen-like cell growth activity of samples extracted from street dusts, Environ. Toxicol., 15, 504, 10.1002/1522-7278(2000)15:5<504::AID-TOX20>3.0.CO;2-# · DOI
  40. Drudge, 2012, Diversity of integron- and culture-associated antibiotic resistance genes in freshwater floc, Appl. Environ. Microbiol., 78, 4367, 10.1128/AEM.00405-12 · DOI
  41. Du, 2012, Occurrence, fate, and ecotoxicity of antibiotics in agro-ecosystems. A review, Agron. Sustain. Dev., 32, 309, 10.1007/s13593-011-0062-9 · DOI
  42. Duwig, 2014, Impacts of anthropogenic activities on the contamination of a sub watershed of lake Titicaca. Are antibiotics a concern in the Bolivian Altiplano?, Proc. Earth Planet. Sci., 10, 370, 10.1016/j.proeps.2014.08.062 · DOI
  43. Eramo, 2017, Partitioning of antibiotic resistance genes and fecal indicators varies intra and inter-storm during combined sewer overflows, Front. Microbiol., 8, 2024, 10.3389/fmicb.2017.02024 · DOI
  44. Escudero, 2015, The integron: adaptation on demand, Microbiol. Spectr., 3
  45. Falkinham, 2015, Epidemiology and ecology of opportunistic premise plumbing pathogens: Legionella pneumophila, Mycobacterium avium, and Pseudomonas aeruginosa, Environ. Health Perspect., 123, 749, 10.1289/ehp.1408692 · DOI
  46. Ferreira da Silva, 2007, Antimicrobial resistance patterns in Enterobacteriaceae isolated from an urban wastewater treatment plant, FEMS Microbiol. Ecol., 60, 166, 10.1111/j.1574-6941.2006.00268.x · DOI
  47. Fick, 2009, Contamination of surface, ground, and drinking water from pharmaceutical production, Environ. Toxicol. Chem., 28, 2522, 10.1897/09-073.1 · DOI
  48. Fries, 2008, Sediment-water exchange of Vibrio sp. and fecal indicator bacteria: implications for persistence and transport in the Neuse River estuary, North Carolina, USA, Water Res., 42, 941, 10.1016/j.watres.2007.09.006 · DOI
  49. Furukawa, 2018, Muddy puddles - the microbiology of puddles located outside tertiary university teaching hospitals, Lett. Appl. Microbiol., 66, 284, 10.1111/lam.12856 · DOI
  50. Fux, 2005, Survival strategies of infectious biofilms, Trends Microbiol., 13, 34, 10.1016/j.tim.2004.11.010 · DOI
  51. Gaffield, 2003, Public health effects of inadequately managed stormwater runoff, Am. J. Public Health, 93, 1527, 10.2105/AJPH.93.9.1527 · DOI
  52. Garner, 2017, Stormwater loadings of antibiotic resistance genes in an urban stream, Water Res., 123, 144, 10.1016/j.watres.2017.06.046 · DOI · Paper page
  53. Gillings, 2015, Using the class 1 integron-integrase gene as a proxy for anthropogenic pollution, ISME J., 9, 1269, 10.1038/ismej.2014.226 · DOI
  54. Glenne, 1984, Simulation of water pollution generation and abatement on suburban watersheds, J. Am. Water Resour. Assoc., 20, 211, 10.1111/j.1752-1688.1984.tb04673.x · DOI
  55. Goñi-Urriza, 2000, Antimicrobial resistance of mesophilic Aeromonas spp. isolated from two European rivers, J. Antimicrob. Chemother., 46, 297, 10.1093/jac/46.2.297 · DOI
  56. Gordon, 2007, Antimicrobial resistance survey in a river receiving effluents from freshwater fish farms, J. Appl. Microbiol., 102, 1167
  57. Gray, 2002, Contaminant flows in urban residential water systems, Urban Water, 4, 331, 10.1016/S1462-0758(02)00033-X · DOI
  58. Griffith, 2010, Microbiological water quality at non-human influenced reference beaches in southern California during wet weather, Mar. Pollut. Bull., 60, 500, 10.1016/j.marpolbul.2009.11.015 · DOI
  59. Gromaire, 2001, Contribution of different sources to the pollution of wet weather flows in combined sewers, Water Res., 35, 521, 10.1016/S0043-1354(00)00261-X · DOI
  60. Guerin, 2009, The SOS response controls integron recombination, Science, 324, 1034, 10.1126/science.1172914 · DOI
  61. Gullberg, 2011, Selection of resistant bacteria at very low antibiotic concentrations, PLoS Pathog., 7, 10.1371/journal.ppat.1002158 · DOI
  62. Gullberg, 2014, Selection of a multidrug resistance plasmid by sublethal levels of antibiotics and heavy metals, mBio 5, 10.1128/mBio.01918-14 · DOI
  63. Guo, 2011, Genetic diversity analyses of class 1 integrons and their associated antimicrobial resistance genes in Enterobacteriaceae strains recovered from aquatic habitats in China, Lett. Appl. Microbiol., 52, 667, 10.1111/j.1472-765X.2011.03059.x · DOI
  64. Gupta, 2018, Resurgence of global opportunistic multidrug-resistant Stenotrophomonas maltophilia, Indian J. Crit. Care Med., 22, 503, 10.4103/ijccm.IJCCM_106_18 · DOI
  65. Hamscher, 2003, Antibiotics in dust originating from a pig-fattening farm: a new source of health hazard for farmers?, Environ. Health Perspect., 111, 1590, 10.1289/ehp.6288 · DOI
  66. Han, 2016, Impacts of reclaimed water irrigation on soil antibiotic resistome in urban parks of Victoria, Australia, Environ. Pollut., 211, 48, 10.1016/j.envpol.2015.12.033 · DOI
  67. Harwell, 2008, Conductivity as a tracer of agricultural and urban runoff to delineate water quality impacts in the northern Everglades, Environ. Monit. Assess., 147, 445, 10.1007/s10661-007-0131-3 · DOI
  68. Hathaway, 2016, Temperature dynamics of stormwater runoff in Australia and the USA, Sci. Total Environ., 559, 141, 10.1016/j.scitotenv.2016.03.155 · DOI · Paper page
  69. Helmreich, 2010, Runoff pollutants of a highly trafficked urban road—correlation analysis and seasonal influences, Chemosphere, 80, 991, 10.1016/j.chemosphere.2010.05.037 · DOI
  70. Henriques, 2006, Occurrence and diversity of integrons and beta-lactamase genes among ampicillin-resistant isolates from estuarine waters, Res. Microbiol., 157, 938, 10.1016/j.resmic.2006.09.003 · DOI
  71. Hernández, 2011, Quinolone resistance: much more than predicted, Front. Microbiol., 2, 22, 10.3389/fmicb.2011.00022 · DOI
  72. Hoa, 2011, Antibiotic contamination and occurrence of antibiotic-resistant bacteria in aquatic environments of northern Vietnam, Sci. Total Environ., 409, 2894, 10.1016/j.scitotenv.2011.04.030 · DOI
  73. Hocquet, 2016, What happens in hospitals does not stay in hospitals: antibiotic-resistant bacteria in hospital wastewater systems, J. Hosp. Infect., 93, 395, 10.1016/j.jhin.2016.01.010 · DOI
  74. Huber, 2016, Critical review of heavy metal pollution of traffic area runoff: occurrence, influencing factors, and partitioning, Sci. Total Environ., 541, 895, 10.1016/j.scitotenv.2015.09.033 · DOI · Paper page
  75. Hughes, 2014, Selection and evolution of resistance to antimicrobial drugs, IUBMB Life, 66, 521, 10.1002/iub.1278 · DOI
  76. Ibekwe, 2013, Potential human pathogenic bacteria in a mixed urban watershed as revealed by pyrosequencing, PLoS One, 8, 10.1371/journal.pone.0079490 · DOI
  77. Ibekwe, 2016, Bacterial community composition and structure in an Urban River impacted by different pollutant sources, Sci. Total Environ., 566–567, 1176, 10.1016/j.scitotenv.2016.05.168 · DOI
  78. Janezic, 2016, Highly divergent Clostridium difficile strains isolated from the environment, PLoS One, 11, 10.1371/journal.pone.0167101 · DOI
  79. Jiang, 2011, Occurrence, distribution and seasonal variation of antibiotics in the Huangpu River, Shanghai, China, Chemosphere, 82, 822, 10.1016/j.chemosphere.2010.11.028 · DOI
  80. Kay, 2004, Fate of veterinary antibiotics in a macroporous tile drained clay soil, Environ. Toxicol. Chem., 23, 1136, 10.1897/03-374 · DOI
  81. Kayhanian, 2012, Review of highway runoff characteristics: comparative analysis and universal implications, Water Res., 46, 6609, 10.1016/j.watres.2012.07.026 · DOI
  82. Kim, 2007, Temporal and spatial trends in the occurrence of human and veterinary antibiotics in aqueous and river sediment matrices, Environ. Sci. Technol., 41, 50, 10.1021/es060737+ · DOI
  83. Kristiansson, 2011, Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements, PLoS One, 6, 10.1371/journal.pone.0017038 · DOI
  84. Krometis, 2010, Comparison of the presence and partitioning behavior of indicator organisms and Salmonella spp. in an urban watershed, J. Water Health, 8, 44, 10.2166/wh.2009.232 · DOI
  85. Kumar, 2012, Physico chemical parameters of river water a review, Int. J. Pharm. Biol. Arch., 3
  86. Kumata, 2000, Historical trends of N -cyclohexyl-2-benzothiazolamine, 2-(4-morpholinyl)benzothiazole, and other anthropogenic contaminants in the urban reservoir sediment core, Environ. Sci. Technol., 34, 246, 10.1021/es990738k · DOI
  87. Kümmerer, 2009, Antibiotics in the aquatic environment—a review—part I, Chemosphere, 75, 417, 10.1016/j.chemosphere.2008.11.086 · DOI
  88. Kümmerer, 2009, Antibiotics in the aquatic environment—a review—part II, Chemosphere, 75, 435, 10.1016/j.chemosphere.2008.12.006 · DOI
  89. Lamprea, 2011, Characterization of atmospheric deposition and runoff water in a small suburban catchment, Environ. Technol., 32, 1141, 10.1080/09593330.2010.528045 · DOI
  90. Lee, 2016, The activity and community structure of total bacteria and denitrifying bacteria across soil depths and biological gradients in estuary ecosystem, Appl. Microbiol. Biotechnol., 100, 1999, 10.1007/s00253-015-7111-2 · DOI
  91. Lee, 2007, Agricultural contributions of antimicrobials and hormones on soil and water quality, 1, 10.1016/S0065-2113(06)93001-6 · DOI
  92. Lekunberri, 2018, Metagenomic exploration reveals a marked change in the river resistome and mobilome after treated wastewater discharges, Environ. Pollut., 234, 538, 10.1016/j.envpol.2017.12.001 · DOI
  93. Li, 2010, Biodegradation and adsorption of antibiotics in the activated sludge process, Environ. Sci. Technol., 44, 3468, 10.1021/es903490h · DOI
  94. Li, 2009, Antibiotic-resistance profile in environmental bacteria isolated from penicillin production wastewater treatment plant and the receiving river, Environ. Microbiol., 11, 1506, 10.1111/j.1462-2920.2009.01878.x · DOI
  95. Liu, 2015, Biocides in the Yangtze River of China: spatiotemporal distribution, mass load and risk assessment, Environ. Pollut., 200, 53, 10.1016/j.envpol.2015.02.013 · DOI
  96. Low, 2016, Identification of antibiotic resistant bacteria community and a GeoChip based study of resistome in urban watersheds, Water Res., 106, 330, 10.1016/j.watres.2016.09.032 · DOI
  97. Lu, 2010, High diversity of extended-spectrum beta-lactamase-producing bacteria in an urban river sediment habitat, Appl. Environ. Microbiol., 76, 5972, 10.1128/AEM.00711-10 · DOI
  98. Lundy, 2012, Risk prioritisation of stormwater pollutant sources, Water Res., 46, 6589, 10.1016/j.watres.2011.10.039 · DOI · Paper page
  99. Lye, 2009, Rooftop runoff as a source of contamination: a review, Sci. Total Environ., 407, 5429, 10.1016/j.scitotenv.2009.07.011 · DOI
  100. Ma, 2017, The prevalence of integrons as the carrier of antibiotic resistance genes in natural and man-made environments, Environ. Sci. Technol., 51, 5721, 10.1021/acs.est.6b05887 · DOI
  101. Mallin, 2009, Comparative impacts of stormwater runoff on water quality of an urban, a suburban, and a rural stream, Environ. Monit. Assess., 159, 475, 10.1007/s10661-008-0644-4 · DOI
  102. Mao, 2014, Persistence of extracellular DNA in river sediment facilitates antibiotic resistance gene propagation, Environ. Sci. Technol., 48, 71, 10.1021/es404280v · DOI
  103. Marchandin, 2003, Extended-spectrum beta-lactamase TEM-24 in an Aeromonas clinical strain: acquisition from the prevalent Enterobacter aerogenes clone in France, Antimicrob. Agents Chemother., 47, 3994, 10.1128/AAC.47.12.3994-3995.2003 · DOI
  104. Marsalek, 2004, Urban wet-weather flows: sources of fecal contamination impacting on recreational waters and threatening drinking-water sources, J. Toxicol. Environ. Health A, 67, 1765, 10.1080/15287390490492430 · DOI
  105. Marti, 2014, The role of aquatic ecosystems as reservoirs of antibiotic resistance, Trends Microbiol., 22, 36, 10.1016/j.tim.2013.11.001 · DOI
  106. McLellan, 2015, The microbiome of urban waters, Int. Microbiol., 18, 141
  107. McManus, 2002, Antibiotic use in plant agriculture, Annu. Rev. Phytopathol., 40, 443, 10.1146/annurev.phyto.40.120301.093927 · DOI
  108. Meletis, 2016, Carbapenem resistance: overview of the problem and future perspectives, Ther. Adv. Infect. Dis., 3, 15
  109. Meroueh, 2003, Structural aspects for evolution of beta-lactamases from penicillin-binding proteins, J. Am. Chem. Soc., 125, 9612, 10.1021/ja034861u · DOI
  110. Miquel, 2003, Office parlementaire d'évaluation des choix scientifiques et technologiques, Tome, 2
  111. Mohanta, 2014, Prevalence of antibiotic-resistant bacteria in three different aquatic environments over three seasons, Environ. Monit. Assess., 186, 5089, 10.1007/s10661-014-3762-1 · DOI
  112. Murakami, 2004, Modelling of runoff behaviour of particle-bound polycyclic aromatic hydrocarbons (PAHs) from roads and roofs, Water Res., 38, 4475, 10.1016/j.watres.2004.07.023 · DOI
  113. Nakayama, 2005, Distributions of perfluorooctanoic acid (PFOA) and perfluorooctane sulfonate (PFOS) in Japan and their toxicities, Environ. Sci., 12, 293
  114. Ng, 2017, Characterization of metagenomes in urban aquatic compartments reveals high prevalence of clinically relevant antibiotic resistance genes in wastewaters, Front. Microbiol., 8, 10.3389/fmicb.2017.02200 · DOI
  115. Noble, 2006, Multitier approach using quantitative PCR to track sources of fecal pollution affecting Santa Monica Bay, California, Appl. Environ. Microbiol., 72, 1604, 10.1128/AEM.72.2.1604-1612.2006 · DOI
  116. Oberlé, 2012, Evidence for a complex relationship between antibiotics and antibiotic-resistant Escherichia coli: from medical center patients to a receiving environment, Environ. Sci. Technol., 46, 1859, 10.1021/es203399h · DOI
  117. Ouyang, 2015, Increased levels of antibiotic resistance in urban stream of Jiulongjiang River, China, Appl. Microbiol. Biotechnol., 99, 5697, 10.1007/s00253-015-6416-5 · DOI
  118. Parker, 2010, Characterizing fecal contamination in stormwater runoff in coastal North Carolina, USA, Water Res., 44, 4186, 10.1016/j.watres.2010.05.018 · DOI
  119. Partridge, 2018, Mobile genetic elements associated with antimicrobial resistance, Clin. Microbiol. Rev., 31, 10.1128/CMR.00088-17 · DOI · Paper page
  120. Paule-Mercado, 2016, Monitoring and predicting the fecal indicator bacteria concentrations from agricultural, mixed land use and urban stormwater runoff, Sci. Total Environ., 550, 1171, 10.1016/j.scitotenv.2016.01.026 · DOI
  121. Peña-Guzmán, 2017, Urban water cycle simulation/management models: a review, Water, 9, 285, 10.3390/w9040285 · DOI
  122. Piddock, 2006, Multidrug-resistance efflux pumps - not just for resistance, Nat. Rev. Microbiol., 4, 629, 10.1038/nrmicro1464 · DOI
  123. Pirnay, 2005, Global Pseudomonas aeruginosa biodiversity as reflected in a Belgian river, Environ. Microbiol., 7, 969, 10.1111/j.1462-2920.2005.00776.x · DOI
  124. Pruden, 2013, Management options for reducing the release of antibiotics and antibiotic resistance genes to the environment, Environ. Health Perspect., 121, 878, 10.1289/ehp.1206446 · DOI
  125. Qi, 2016, Relationship between antibiotic resistance, biofilm formation, and biofilm-specific resistance in Acinetobacter baumannii, Front. Microbiol., 7, 10.3389/fmicb.2016.00483 · DOI
  126. Rashid, 2013, Impact of anthropogenic activities on water quality of Lidder River in Kashmir Himalayas, Environ. Monit. Assess., 185, 4705, 10.1007/s10661-012-2898-0 · DOI
  127. Reano, 2015, Long-term characterization of residential runoff and assessing potential surrogates of fecal indicator organisms, Water Res., 74, 67, 10.1016/j.watres.2015.01.022 · DOI
  128. Rhodes, 2000, Distribution of oxytetracycline resistance plasmids between aeromonads in hospital and aquaculture environments: implication of Tn1721 in dissemination of the tetracycline resistance determinant tet A, Appl. Environ. Microbiol., 66, 3883, 10.1128/AEM.66.9.3883-3890.2000 · DOI
  129. Roberts, 2006, The occurrence of selected pharmaceuticals in wastewater effluent and surface waters of the lower Tyne catchment, Sci. Total Environ., 356, 143, 10.1016/j.scitotenv.2005.04.031 · DOI
  130. Rooklidge, 2004, Environmental antimicrobial contamination from terraccumulation and diffuse pollution pathways, Sci. Total Environ., 325, 1, 10.1016/j.scitotenv.2003.11.007 · DOI
  131. Rosewarne, 2010, Class 1 integrons in benthic bacterial communities: abundance, association with Tn402-like transposition modules and evidence for coselection with heavy-metal resistance, FEMS Microbiol. Ecol., 72, 35, 10.1111/j.1574-6941.2009.00823.x · DOI
  132. Salyers, 2004, Human intestinal bacteria as reservoirs for antibiotic resistance genes, Trends Microbiol., 12, 412, 10.1016/j.tim.2004.07.004 · DOI
  133. Sandegren, 2014, Selection of antibiotic resistance at very low antibiotic concentrations, Ups. J. Med. Sci., 119, 103, 10.3109/03009734.2014.904457 · DOI
  134. Santos, 2013, Contribution of hospital effluents to the load of pharmaceuticals in urban wastewaters: identification of ecologically relevant pharmaceuticals, Sci. Total Environ., 461–462, 302, 10.1016/j.scitotenv.2013.04.077 · DOI
  135. Sarmah, 2006, A global perspective on the use, sales, exposure pathways, occurrence, fate and effects of veterinary antibiotics (VAs) in the environment, Chemosphere, 65, 725, 10.1016/j.chemosphere.2006.03.026 · DOI · Paper page
  136. Sasaki, 2003, Impact of airborne perfluorooctane sulfonate on the human body burden and the ecological system, Bull. Environ. Contam. Toxicol., 71, 408, 10.1007/s00128-003-0179-x · DOI
  137. Sauer, 2011, Detection of the human specific Bacteroides genetic marker provides evidence of widespread sewage contamination of stormwater in the urban environment, Water Res., 45, 4081, 10.1016/j.watres.2011.04.049 · DOI
  138. Schreiber, 2013, Antibiotic resistance among autochthonous aquatic environmental bacteria, Water Sci. Technol. J. Int. Assoc. Water Pollut. Res., 67, 117, 10.2166/wst.2012.539 · DOI
  139. Scornec, 2017, Inducibility of Tn916 conjugative transfer in Enterococcus faecalis by subinhibitory concentrations of ribosome-targeting antibiotics, J. Antimicrob. Chemother., 72, 2722, 10.1093/jac/dkx202 · DOI
  140. Sekizuka, 2018, Complete genome sequence of a blaKPC-2-positive Klebsiella pneumoniae strain isolated from the effluent of an urban sewage treatment Plant in Japan, mSphere, 3, 10.1128/mSphere.00314-18 · DOI
  141. Selvakumar, 2006, Variation of microorganism concentrations in urban stormwater runoff with land use and seasons, J. Water Health, 4, 109, 10.2166/wh.2006.0009 · DOI
  142. Shakir, 2013, Impact of anthropogenic activities on physico-chemical parameters of water and mineral uptake in Catla catla from river Ravi, Pakistan, Environ. Monit. Assess., 185, 2833, 10.1007/s10661-012-2753-3 · DOI
  143. Shao, 2018, Research progress on distribution, migration, transformation of antibiotics and antibiotic resistance genes (ARGs) in aquatic environment, Crit. Rev. Biotechnol., 38, 1195, 10.1080/07388551.2018.1471038 · DOI
  144. Sidhu, 2012, Prevalence of human pathogens and indicators in stormwater runoff in Brisbane, Australia, Water Res., 46, 6652, 10.1016/j.watres.2012.03.012 · DOI
  145. Sidhu, 2013, Sewage pollution in urban stormwater runoff as evident from the widespread presence of multiple microbial and chemical source tracking markers, Sci. Total Environ., 463–464, 488, 10.1016/j.scitotenv.2013.06.020 · DOI · Paper page
  146. Sidhu, 2013, Sensitive detection of human adenovirus from small volume of primary wastewater samples by quantitative PCR, J. Virol. Methods, 187, 395, 10.1016/j.jviromet.2012.11.002 · DOI
  147. Silbergeld, 2008, Industrial food animal production, antimicrobial resistance, and human health, Annu. Rev. Public Health, 29, 151, 10.1146/annurev.publhealth.29.020907.090904 · DOI
  148. Song, 2005, Molecular characterization of TEM-type beta-lactamases identified in cold-seep sediments of Edison Seamount (south of Lihir Island, Papua New Guinea), J. Microbiol., 43, 172
  149. Stalder, 2012, Integron involvement in environmental spread of antibiotic resistance, Front. Microbiol., 3, 10.3389/fmicb.2012.00119 · DOI
  150. Stalder, 2014, Quantitative and qualitative impact of hospital effluent on dissemination of the integron pool, ISME J., 8, 768, 10.1038/ismej.2013.189 · DOI
  151. Stokes, 2011, Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into gram-negative pathogens, FEMS Microbiol. Rev., 35, 790, 10.1111/j.1574-6976.2011.00273.x · DOI
  152. Subirats, 2017, Wastewater pollution differently affects the antibiotic resistance gene pool and biofilm bacterial communities across streambed compartments, Mol. Ecol., 26, 5567, 10.1111/mec.14288 · DOI
  153. Thurston-Enriquez, 2005, Microbial quality of runoff following land application of cattle manure and swine slurry, J. Water Health, 3, 157, 10.2166/wh.2005.0015 · DOI
  154. Tissera, 2013, Isolation of extended Spectrum β-lactamase (ESBL) producing bacteria from urban surface waters in Malaysia, Malays J. Med. Sci., 20, 14
  155. Tiwari, 2017, Review on fate and mechanism of removal of pharmaceutical pollutants from wastewater using biological approach, Bioresour. Technol., 224, 1, 10.1016/j.biortech.2016.11.042 · DOI
  156. Tobias, 2013, Preserving ecosystem services in urban regions: challenges for planning and best practice examples from Switzerland, Integr. Environ. Assess. Manag., 9, 243, 10.1002/ieam.1392 · DOI
  157. Turiel, 2006, Multiresidue analysis of quinolones and fluoroquinolones in soil by ultrasonic-assisted extraction in small columns and HPLC-UV, Anal. Chim. Acta, 562, 30, 10.1016/j.aca.2006.01.054 · DOI
  158. Välitalo, 2017, Toxicological impacts of antibiotics on aquatic micro-organisms: a mini-review, Int. J. Hyg. Environ. Health, 220, 558, 10.1016/j.ijheh.2017.02.003 · DOI
  159. Vaz-Moreira, 2014, Bacterial diversity and antibiotic resistance in water habitats: searching the links with the human microbiome, FEMS Microbiol. Rev., 38, 761, 10.1111/1574-6976.12062 · DOI
  160. Verlicchi, 2012, Hospital effluent: investigation of the concentrations and distribution of pharmaceuticals and environmental risk assessment, Sci. Total Environ., 430, 109, 10.1016/j.scitotenv.2012.04.055 · DOI
  161. Wang, 2013, Effect of GAC pre-treatment and disinfectant on microbial community structure and opportunistic pathogen occurrence, Water Res., 47, 5760, 10.1016/j.watres.2013.06.052 · DOI
  162. Wang, 2015, Enhanced horizontal transfer of antibiotic resistance genes in freshwater microcosms induced by an ionic liquid, PLoS One, 10
  163. Wellington, 2013, The role of the natural environment in the emergence of antibiotic resistance in gram-negative bacteria, Lancet Infect. Dis., 13, 155, 10.1016/S1473-3099(12)70317-1 · DOI
  164. West, 2011, Antibiotic resistance, gene transfer, and water quality patterns observed in waterways near CAFO farms and wastewater treatment facilities, Water Air Soil Pollut., 217, 473, 10.1007/s11270-010-0602-y · DOI
  165. Wright, 2008, Influence of industrial contamination on mobile genetic elements: class 1 integron abundance and gene cassette structure in aquatic bacterial communities, ISME J., 2, 417, 10.1038/ismej.2008.8 · DOI
  166. Xu, 2018, First detection and genomics analysis of KPC-2-producing Citrobacter isolates from river sediments, Environ. Pollut., 235, 931, 10.1016/j.envpol.2017.12.084 · DOI
  167. Yan, 2014, Photo-transformation of pharmaceutically active compounds in the aqueous environment: a review, Environ. Sci.: Processes Impacts, 16, 697
  168. Yan, 2013, Antibiotics in the surface water of the Yangtze Estuary: occurrence, distribution and risk assessment, Environ. Pollut., 175, 22, 10.1016/j.envpol.2012.12.008 · DOI
  169. Yang, 2003, Evolution of antibiotic occurrence in a river through pristine, urban and agricultural landscapes, Water Res., 37, 4645, 10.1016/S0043-1354(03)00399-3 · DOI
  170. Yang, 2017, Sources and mechanisms of nitrate and orthophosphate transport in urban stormwater runoff from residential catchments, Water Res., 112, 176, 10.1016/j.watres.2017.01.039 · DOI
  171. Yang, 2008, Growth-inhibiting effects of 12 antibacterial agents and their mixtures on the freshwater microalga Pseudokirchneriella subcapitata, Environ. Toxicol. Chem., 27, 1201, 10.1897/07-471.1 · DOI
  172. Yang, 2011, Spatial and seasonal distribution of selected antibiotics in surface waters of the Pearl Rivers, China, J. Environ. Sci. Health B, 46, 272, 10.1080/03601234.2011.540540 · DOI
  173. Yazdanfar, 2015, Urban drainage system planning and design—challenges with climate change and urbanization: a review, Water Sci. Technol. J. Int. Assoc. Water Pollut. Res., 72, 165, 10.2166/wst.2015.207 · DOI
  174. Zhang, 2016, Antibiotic concentration and antibiotic-resistant bacteria in two shallow urban lakes after stormwater event, Environ. Sci. Pollut. Res. Int., 23, 9984, 10.1007/s11356-016-6237-9 · DOI
  175. Zhang, 2016, Occurrence of antibiotic resistance genes in landfill leachate treatment plant and its effluent-receiving soil and surface water, Environ. Pollut., 218, 1255, 10.1016/j.envpol.2016.08.081 · DOI
  176. Zhou, 2017, Antibiotic resistance genes in an urban river as impacted by bacterial community and physicochemical parameters, Environ. Sci. Pollut. Res. Int., 24, 23753, 10.1007/s11356-017-0032-0 · DOI

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Metadata

Authors
Almakki, A., Jumas-Bilak, E., Marchandin, H., & Licznar-Fajardo, P.
Affiliations
  • University of Basrah (IQ)
  • Centre National de la Recherche Scientifique (FR)
ORCID
Venue
Science of The Total Environment
Publisher
Elsevier BV
Published
2019-06
Volume
667
Pages
64-76
ISSN
0048-9697 (ISSN-L)
DOI
10.1016/j.scitotenv.2019.02.183
OpenAlex
W2915014403
Cited by
194
References
4
Citations by year
2026: 12 · 2025: 21 · 2024: 28 · 2023: 28 · 2022: 34 · 2021: 32 · 2020: 27 · 2019: 10
FWCI
1.09
Type
journal article
Language
en
Open access
Licence
Locations
  • The Science of The Total Environment (acceptedVersion)
  • PubMed (publishedVersion)
  • HAL (submittedVersion, other-oa)
Funders
Labex (ANR-11-LABX-0010)
Topics
  • Physical Sciences › Environmental Science › Pollution › Pharmaceutical and Antibiotic Environmental Impacts
  • Health Sciences › Medicine › Infectious Diseases › Antibiotic Use and Resistance
  • Health Sciences › Medicine › Microbiology (medical) › Antibiotic Resistance in Bacteria
Keywords
antibiotic resistance, urban runoff, antibiotic-resistant bacteria, resistance genes, urban water quality, sewer systems, wastewater treatment plant effluent, environmental reservoirs, microbial community dynamics, aquatic ecosystems, environmental pressure
MeSH terms
Bacteria, Cities, Drug Resistance, Microbial, Drug Resistance, Bacterial, Wastewater, Microbiota

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CoChat. (2026). Citation check: Antibiotic resistance in urban runoff. https://app.cochat.ai/papers/10.1016/j.scitotenv.2019.02.183
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Almakki, A., Jumas-Bilak, E., Marchandin, H., & Licznar-Fajardo, P. (2019). Antibiotic resistance in urban runoff. Science of The Total Environment. https://doi.org/10.1016/j.scitotenv.2019.02.183