The DOI matches its Crossref record; 25 of the 25 references it cites were found in a registry or an index.
Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana
Open accessAbstract
Higher plants possess a large set of the classical guaiacol peroxidases (class III peroxidases, E.C. 1.11.1.7). These enzymes have been implicated in a wide array of physiological processes such as H(2)O(2) detoxification, auxin catabolism and lignin biosynthesis and stress response (wounding, pathogen attack, etc.). During the last 10 years, molecular cloning has allowed the isolation and characterization of several genes encoding peroxidases in plants. The achievement of the large scale Arabidopsis genome sequencing, combined with the DNA complementary to RNA (cDNA) expressed sequence tags projects, provided the opportunity to draw up the first comprehensive list of peroxidases in a plant. By screening the available databases, we have identified 73 peroxidase genes throughout the Arabidopsis genome. The evolution of the peroxidase multigene family has been investigated by analyzing the gene structure (intron/exon) in correlation with the phylogenetic relationships between the isoperoxidases. An evolutionary pattern of extensive gene duplications can be inferred and is discussed. Using a cDNA array procedure, the expression pattern of 23 peroxidases was established in the different organs of the plant. All the tested peroxidases were expressed at various levels in roots, while several were also detected in stems, leaves and flowers. The specific functions of these genes remain to be determined.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
A comprehensive set of sequence analysis programs for the VAX
Devereux, J., Haeberli, P., & Smithies, O. (1984) · Nucleic Acids Research · doi:10.1093/nar/12.1part1.387 · Cited by 14,222
Codon-substitution models for heterogeneous selection pressure at amino acid sites
Yang, Z., Nielsen, R., Goldman, N., & Pedersen, A.-M. K. (2000) · Genetics · doi:10.1093/genetics/155.1.431 · Cited by 2,286
Orchestrated Transcription of Key Pathways in Arabidopsis by the Circadian Clock
Harmer, S. L., Hogenesch, J. B., Straume, M., Chang, H.-S., Han, B., Zhu, T., Wang, X., Kreps, J. A., & Kay, S. A. (2000) · Science · doi:10.1126/science.290.5499.2110 · Cited by 1,640
Coordinated plant defense responses in Arabidopsis revealed by microarray analysis
Schenk, P. M., Kazan, K., Wilson, I., Anderson, J. P., Richmond, T., Somerville, S. C., & Manners, J. M. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.97.21.11655 · Cited by 1,370
The Origins of Genomic Duplications in Arabidopsis
Vision, T. J., Brown, D. G., & Tanksley, S. D. (2000) · Science · doi:10.1126/science.290.5499.2114 · Cited by 1,038
A Large Family of Class III Plant Peroxidases
Hiraga, S., Sasaki, K., Ito, H., Ohashi, Y., & Matsui, H. (2001) · Plant and Cell Physiology · doi:10.1093/pcp/pce061 · Cited by 912
Superfamily of plant, fungal and bacterial peroxidases
Welinder, K. G. (1992) · Current Opinion in Structural Biology · doi:10.1016/0959-440x(92)90230-5 · Cited by 825
Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana
Lin, X., Kaul, S., Rounsley, S., Shea, T. P., Benito, M.-I., Town, C. D., Fujii, C. Y., Mason, T., Bowman, C. L., Barnstead, M., et al. (1999) · Nature · doi:10.1038/45471 · Cited by 709
The Arabidopsis thaliana ABC Protein Superfamily, a Complete Inventory
Sánchez-Fernández, R., Davies, T. G. E., Coleman, J. O. D., & Rea, P. A. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m103104200 · Cited by 560
Cited by
Boerjan, W., Ralph, J., & Baucher, M. (2003) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.54.031902.134938 · Cited by 4,504
Horseradish peroxidase: a modern view of a classic enzyme
Veitch, N. C. (2004) · Phytochemistry · doi:10.1016/j.phytochem.2003.10.022 · Cited by 1,379
Tsukagoshi, H., Busch, W., & Benfey, P. N. (2010) · Cell · doi:10.1016/j.cell.2010.10.020 · Cited by 1,081
Performing the paradoxical: how plant peroxidases modify the cell wall
PASSARDI, F., PENEL, C., & DUNAND, C. (2004) · Trends in Plant Science · doi:10.1016/j.tplants.2004.09.002 · Cited by 932
Self-citationThe Phenylpropanoid Pathway in Arabidopsis
Fraser, C. M., & Chapple, C. (2011) · The Arabidopsis Book · doi:10.1199/tab.0152 · Cited by 860
Metadata
- Authors
- Tognolli, M., Penel, C., Greppin, H., & Simon, P.
- Venue
- Gene
- Publisher
- Elsevier BV
- Published
- 2002-04
- Volume
- 288
- Issue
- 1-2
- Pages
- 129-138
- ISSN
- 0378-1119 (ISSN-L)
- OpenAlex
- W1993391297
- Cited by
- 434
- References
- 25
- FWCI
- 22.49
- Type
- journal article
- Language
- en
- Open access
- green
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana. https://app.cochat.ai/papers/10.1016/s0378-1119(02)00465-1
- The paper
- Tognolli, M., Penel, C., Greppin, H., & Simon, P. (2002). Analysis and expression of the class III peroxidase large gene family in Arabidopsis thaliana. Gene. https://doi.org/10.1016/s0378-1119(02)00465-1
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.