The DOI matches its Crossref record.
Gene and genome duplications in vertebrates: the one-to-four (-to-eight in fish) rule and the evolution of novel gene functions
Open accessAbstract
One important mechanism for functional innovation during evolution is the duplication of genes and entire genomes. Evidence is accumulating that during the evolution of vertebrates from early deuterostome ancestors entire genomes were duplicated through two rounds of duplications (the 'one-to-two-to-four' rule). The first genome duplication in chordate evolution might predate the Cambrian explosion. The second genome duplication possibly dates back to the early Devonian. Recent data suggest that later in the Devonian, the fish genome was duplicated for a third time to produce up to eight copies of the original deuterostome genome. This last duplication took place after the two major radiations of jawed vertebrate life, the ray-finned fish (Actinopterygia) and the sarcopterygian lineage, diverged. Therefore the sarcopterygian fish, which includes the coelacanth, lungfish and all land vertebrates such as amphibians, reptiles, birds and mammals, tend to have only half the number of genes compared with actinopterygian fish. Although many duplicated genes turned into pseudogenes, or even 'junk' DNA, many others evolved new functions particularly during development. The increased genetic complexity of fish might reflect their evolutionary success and diversity.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cited by
The zebrafish reference genome sequence and its relationship to the human genome.
Howe, K., Clark, M. D., Torroja, C. F., Torrance, J., Berthelot, C., Muffato, M., Collins, J. E., Humphray, S., McLaren, K., Matthews, L., et al. (2013) · Nature · doi:10.1038/nature12111 · Cited by 5,100
Two Rounds of Whole Genome Duplication in the Ancestral Vertebrate
Dehal, P., & Boore, J. L. (2005) · PLoS Biology · doi:10.1371/journal.pbio.0030314 · Cited by 1,526
From 2R to 3R: evidence for a fish-specific genome duplication (FSGD)
Meyer, A., & Van de Peer, Y. (2005) · BioEssays · doi:10.1002/bies.20293 · Cited by 945
Self-citationZebrafish Comparative Genomics and the Origins of Vertebrate Chromosomes
Postlethwait, J. H., Woods, I. G., Ngo-Hazelett, P., Yan, Y.-L., Kelly, P. D., Chu, F., Huang, H., Hill-Force, A., & Talbot, W. S. (2000) · Genome Research · doi:10.1101/gr.164800 · Cited by 688
Computed structures of core eukaryotic protein complexes
Humphreys, I. R., Pei, J., Baek, M., Krishnakumar, A., Anishchenko, I., Ovchinnikov, S., Zhang, J., Ness, T. J., Banjade, S., Bagde, S. R., et al. (2021) · Science · doi:10.1126/science.abm4805 · Cited by 542
Gu, X., Wang, Y., & Gu, J. (2002) · Nature Genetics · doi:10.1038/ng902 · Cited by 257
Matzke, M. A., Mette, M. F., & Matzke, A. J. M. (2000) · Plant Molecular Biology · doi:10.1023/a:1006484806925 · Cited by 214
Single-Cell RNA-Sequencing Reveals a Continuous Spectrum of Differentiation in Hematopoietic Cells
Macaulay, I. C., Svensson, V., Labalette, C., Ferreira, L., Hamey, F., Voet, T., Teichmann, S. A., & Cvejic, A. (2016) · Cell Reports · doi:10.1016/j.celrep.2015.12.082 · Cited by 191
Transposons, Genome Size, and Evolutionary Insights in Animals
Canapa, A., Barucca, M., Biscotti, M. A., Forconi, M., & Olmo, E. (2015) · Cytogenetic and Genome Research · doi:10.1159/000444429 · Cited by 164
Adaptive evolution of voltage-gated sodium channels: The first 800 million years
Zakon, H. H. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1201884109 · Cited by 156
Whole-Genome Duplication and the Functional Diversification of Teleost Fish Hemoglobins
Opazo, J. C., Butts, G. T., Nery, M. F., Storz, J. F., & Hoffmann, F. G. (2013) · Molecular Biology and Evolution · doi:10.1093/molbev/mss212 · Cited by 98
Treen, N., Itoh, N., Miura, H., Kikuchi, I., Ueda, T., Takahashi, K. G., Ubuka, T., Yamamoto, K., Sharp, P. J., Tsutsui, K., et al. (2012) · General and Comparative Endocrinology · doi:10.1016/j.ygcen.2012.01.008 · Cited by 77
A chromosome-level reference genome for the common octopus, Octopus vulgaris (Cuvier, 1797)
Destanović, D., Schultz, D. T., Styfhals, R., Cruz, F., Gómez-Garrido, J., Gut, M., Gut, I., Fiorito, G., Simakov, O., Alioto, T. S., et al. (2023) · G3: Genes, Genomes, Genetics · doi:10.1093/g3journal/jkad220 · Cited by 36
Metadata
- Authors
- Meyer, A., & Schartl, M.
- Venue
- Current Opinion in Cell Biology
- Publisher
- Elsevier BV
- Published
- 1999-12
- Volume
- 11
- Issue
- 6
- Pages
- 699-704
- ISSN
- 0955-0674 (ISSN-L)
- OpenAlex
- W2137845412
- Cited by
- 818
- References
- 0
- FWCI
- 3.18
- Type
- journal article
- Language
- en
- Open access
- bronze
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.