New Electrophiles and Strategies for Mechanism-Based and Targeted Covalent Inhibitor Design
Abstract
Covalent inhibitors are experiencing a growing resurgence in drug design and are an increasingly useful tool in molecular biology. The ability to attach inhibitors to their targets by a covalent linkage offers pharmacodynamic and pharmacokinetic advantages, but this can also be a liability if undesired off-target reactions are not mitigated. The discovery of new electrophilic groups that react selectively with specific amino acid residues is therefore highly desirable in the design of targeted covalent inhibitors (TCIs). Additionally, the ability to control the reactivity through exploitation of the target enzyme's machinery, as in mechanism-based inhibitors (MBIs), greatly benefits from the discovery of new strategies. This Perspective showcases recent advances in electrophile development and their application in TCIs and MBIs, exhibiting high selectivity for their targets.
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Currently there are limited methods to selectively covalently bind to a protein.
“Currently there are limited methods to selectively covalently bind to a protein56–58”
From PROTAC targeted protein degraders: the past is prologue (2022) · cites this paper as [57]
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Kamoshita, S., & Sakurai, K. (2026) · ChemistryEurope · doi:10.1002/ceur.70328
- Authors
- Ray, S., & Murkin, A. S.
- Affiliations
- University at Buffalo, State University of New York (US)
- Corresponding author
- Murkin, Andrew S.
- Venue
- Biochemistry
- Publisher
- American Chemical Society (ACS)
- Published
- 2019-04-16
- Volume
- 58
- Issue
- 52
- Pages
- 5234-5244
- ISSN
- 0006-2960 (ISSN-L)
- 1520-4995
- OpenAlex
- W2936788142
- Cited by
- 108
- References
- 100
- Citations by year
- 2026: 14 · 2025: 17 · 2024: 8 · 2023: 14 · 2022: 19 · 2021: 20 · 2020: 14 · 2019: 2
- FWCI
- 1.04
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- Locations
- Biochemistry (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Division of Chemistry (CHE1255136, CHE1808449)
- Topics
- Physical Sciences › Chemistry › Organic Chemistry › Click Chemistry and Applications
- Physical Sciences › Chemistry › Organic Chemistry › Chemical Reaction Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Chemical Synthesis and Analysis
- Keywords
- covalent inhibitors, electrophiles, targeted covalent inhibitors, mechanism-based inhibitors, drug design
- MeSH terms
- Enzyme Inhibitors, Humans, Substrate Specificity, Drug Design
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
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