Protein Analysis by Shotgun/Bottom-up Proteomics

Zhang, Yaoyang, Fonslow, Bryan R., Shan, Bing, Baek, Moon-Chang, Yates, John R.·2013·Chemical Reviews

Cited by (1,000)

Items 501–600 of 1,000

  1. Advances in High Throughput Proteomics Profiling in Establishing Potential Biomarkers for Gastrointestinal Cancer
    Md Zahirul Islam Khan, Shing Yau Tam, Hkw Law · 2022 · Cells
  2. Dual Biomimetic Recognition-Driven Plasmonic Nanogap-Enhanced Raman Scattering for Ultrasensitive Protein Fingerprinting and Quantitation
    Hui He, Lingli Zhou, Zhanchen Guo, Pengfei Li, Song Wei Gao, Zhen Liu · 2022 · Nano Letters
  3. Technologies for Direct Detection of Covalent Protein–Drug Adducts
    Elma Mons, Robbert Q. Kim, Monique P. C. Mulder · 2023 · Pharmaceuticals
  4. Development of an efficient, effective, and economical technology for proteome analysis
    Katherine R. Martin, Ha T. Le, Ahmed Abdelgawad, Canyuan Yang, Guotao Lu, Jessica L. Keffer, Xiaohui Zhang, Zhihao Zhuang, Papa Nii Asare‐Okai, Clara S. Chan et al. · 2024 · Cell Reports Methods
  5. Integration of Cell Lysis, Protein Extraction, and Digestion into One Step for Ultrafast Sample Preparation for Phosphoproteome Analysis
    Fangjie Liu, Mingliang Ye, Yanbo Pan, Yi Zhang, Yangyang Bian, Zhen Sun, Jun Zhu, Kai Cheng, Hanfa Zou · 2014 · Analytical Chemistry
  6. Overview of proteomics studies in obstructive sleep apnea
    Amélia Feliciano, Vukosava Milic Torres, Fátima Vaz, Ana Sofía Carvalho, Rune Matthiesen, Paula Pinto, Atul Malhotra, Cristina Bárbara, Deborah Penque · 2015 · Sleep Medicine
  7. Dynamic Assessment of Functional Lipidomic Analysis in Human Urine
    Hannah E. Rockwell, Fei Gao, Emily Yi-Shyuan Chen, Justice McDaniel, Rangaprasad Sarangarajan, Niven R. Narain, Michael A. Kiebish · 2016 · Lipids
  8. Streamlining Bottom-Up Protein Identification Based on Selective Ultraviolet Photodissociation (UVPD) of Chromophore-Tagged Histidine- and Tyrosine-Containing Peptides
    Julia R. Aponte, Lisa A. Vasicek, Jagannath Swaminathan, Hua Xu, Myong Chul Koag, Seongmin Lee, Jennifer S. Brodbelt · 2014 · Analytical Chemistry
  9. Optomechanical devices for deep plasma cancer proteomics
    Priscila M. Kosaka, Montserrat Calleja, Javier Tamayo · 2017 · Seminars in Cancer Biology
  10. Reductive methylation labeling, from quantitative to structural proteomics
    Zheyi Liu, Ye Zhou, Jing Liu, Jin Chen, Albert J. R. Heck, Fangjun Wang · 2019 · TrAC Trends in Analytical Chemistry
  11. Single-cell proteomics in complex tissues using microprobe capillary electrophoresis mass spectrometry
    Camille Lombard‐Banek, Sam B. Choi, Péter Nemes · 2019 · Methods in enzymology on CD-ROM/Methods in enzymology
  12. Proteomics and Leishmaniasis: Potential Clinical Applications
    J. Capelli-Peixoto, S. Mule, Fabia Tomie Tano, Giuseppe Palmisano, B. Stolf · 2019 · PROTEOMICS - Clinical Applications
  13. Lights and Shadows of TORCH Infection Proteomics
    Janaína Macedo-da-Silva, Cláudio Romero Farias Marinho, Giuseppe Palmisano, Lívia Rosa-Fernandes · 2020 · Genes
  14. A comprehensive study of the proteins involved in salinity stress response in roots and shoots of the FL478 genotype of rice (Oryza sativa L. ssp. indica)
    Camilo López‐Cristoffanini, Mireia Bundó, Xavier Serrat, Blanca San Segundo, Marta López‐Carbonell, Salvador Nogués · 2020 · The Crop Journal
  15. Foodomics Applications
    Carlos León, Alejandro Cifuentes, Alberto Valdés · 2018 · Comprehensive analytical chemistry
  16. Separation methods in single-cell proteomics: RPLC or CE?
    Kellye A. Cupp‐Sutton, Mulin Fang, Si Wu · 2022 · International Journal of Mass Spectrometry
  17. A simple dual online ultra-high pressure liquid chromatography system (sDO-UHPLC) for high throughput proteome analysis
    Hangyeore Lee, Dong‐Gi Mun, Jingi Bae, Hokeun Kim, Se Yeon Oh, Young Soo Park, Jae-Hyuk Lee, Sang‐Won Lee · 2015 · The Analyst
  18. Sequence comparison, molecular modeling, and network analysis predict structural diversity in cysteine proteases from the Cape sundew, Drosera capensis
    Carter T. Butts, Xuhong Zhang, John E. Kelly, Kyle W. Roskamp, Megha H. Unhelkar, J. Alfredo Freites, Seemal Tahir, Rachel W. Martin · 2016 · Computational and Structural Biotechnology Journal
  19. Aspirin inhibits proteasomal degradation and promotes α-synuclein aggregate clearance through K63 ubiquitination
    Jing Gao, Yang Liu, Chenfang Si, Rui Hong Guo, Shouqiao Hou, Xiaosong Liu, Houfang Long, Di Liu, Daichao Xu, Zai-Rong Zhang et al. · 2025 · Nature Communications
  20. Characterization and usage of the EASY-spray technology as part of an online 2D SCX-RP ultra-high pressure system
    Fabio Marino, Alba Cristobal, Nadine A. Binai, Nicolai Bache, Albert J. R. Heck, Shabaz Mohammed · 2014 · The Analyst
  21. Selective Hydrolysis of Transferrin Promoted by Zr-Substituted Polyoxometalates
    Laura S. Van Rompuy, Nada D. Savić, Alvaro Rodriguez, Tatjana N. Parac‐Vogt · 2020 · Molecules
  22. Proteomics Analysis in Dairy Products: Cheese, a Review
    Efterpi V. Bouroutzika, Stavros Proikakis, Athanasios K. Anagnostopoulos, Angeliki I. Katsafadou, George C. Fthenakis, George Th. Tsangaris · 2021 · Applied Sciences
  23. Multi‐Omics Studies in Historically Excluded Populations: The Road to Equity
    Guang Yang, Mrinal Mishra, Minoli A. Perera · 2022 · Clinical Pharmacology & Therapeutics
  24. Recent advances in the production of emulsifying peptides with the aid of proteomics and bioinformatics
    Pedro J. García‐Moreno, Betül Yeşiltaş, Simon Gregersen Echers, Paolo Marcatili, Michael Toft Overgaard, Egon Bech Hansen, Charlotte Jacobsen · 2023 · Current Opinion in Food Science
  25. AuNPs/CNC Nanocomposite with A “Dual Dispersion” Effect for LDI‐TOF MS Analysis of Intact Proteins in NSCLC Serum Exosomes
    Liang Shan, Yongxia Qiao, Lifang Ma, Xiao Zhang, Changqiang Chen, Xin Xu, Dan Li, Shiyu Qiu, Xiangfei Xue, Yongchun Yu et al. · 2024 · Advanced Science
  26. Mirror-image trypsin digestion and sequencing of D-proteins
    Guanwei Zhang, Ting F Zhu · 2024 · Nature Chemistry
  27. Identification of Endogenous Site-specific Covalent Binding of Catechol Estrogens to Serum Proteins in Human Blood
    Chieh-Ming Fang, Ming-Chun Ku, Che-Kai Chang, Huei-Chen Liang, Tzu-Fan Wang, Chih‐Hsing Wu, Shu‐Hui Chen · 2015 · Toxicological Sciences
  28. A proteomic profile of synoviocyte lesions microdissected from formalin-fixed paraffin-embedded synovial tissues of rheumatoid arthritis
    Junji Hayashi, Makoto Kihara, Harubumi Kato, Toshihide Nishimura · 2015 · Clinical Proteomics
  29. Dissecting the chloroplast proteome of chickpea ( Cicer arietinum L.) provides new insights into classical and non-classical functions
    Nilesh Vikram Lande, Pratigya Subba, Pragya Barua, Dipak Gayen, Thottethodi Subrahmanya Keshava Prasad, Subhra Chakraborty, Niranjan Chakraborty · 2017 · Journal of Proteomics
  30. Quantitative proteome analysis of bovine mammary gland reveals protein dynamic changes involved in peak and late lactation stages
    Xianrui Zheng, Chao Ning, Yichun Dong, Pengju Zhao, Junhui Li, Ziyao Fan, Li Jiang, Ying Yu, Raphael Mrode, Jianfeng Liu · 2017 · Biochemical and Biophysical Research Communications
  31. Establishment of a biobank for human lung tissues of congenital diaphragmatic hernia and congenital pulmonary airway malformation
    Richard Wagner, Lojine Ayoub, Shana Kahnamoui, Henry Li, Daywin Patel, Daisy J. X. Liu, Marc R. Del Bigio, Camelia Stefanovici, Martin Lacher, Richard Keijzer · 2019 · Journal of Pediatric Surgery
  32. EPIFANY: A Method for Efficient High-Confidence Protein Inference
    Julianus Pfeuffer, Timo T. Sachsenberg, Tjeerd M. H. Dijkstra, Oliver Serang, Knut Reinert, Oliver Kohlbacher · 2020 · Journal of Proteome Research
  33. mRNA display with library of even-distribution reveals cellular interactors of influenza virus NS1
    Yushen Du, Judd F. Hultquist, Quan Zhou, Anders Olson, Yenwen Tseng, Tian-hao Zhang, Mengying Hong, Kejun Tang, Liubo Chen, Xiangzhi Meng et al. · 2020 · Nature Communications
  34. Uncovering immobilized trypsin digestion features from large-scale proteome data generated by high-resolution mass spectrometry
    Liangliang Sun, Guijie Zhu, Xiaojing Yan, Si Mou, Norman J. Dovic̀hi · 2014 · Journal of Chromatography A
  35. Surface Enhanced Laser Desorption Ionization of Phospholipids on Gold Nanoparticles for Mass Spectrometric Immunoassay
    Xiangcheng Lin, Xiangnan Wang, Lan Liu, Qian Wen, Ru‐Qin Yu, Jian‐Hui Jiang · 2016 · Analytical Chemistry
  36. Mass Spectrometry-Based Top-Down Proteomics for Proteoform Profiling of Protein Corona
    S. Sadeghi, Fei Fang, Reyhane Tabatabaeian Nimavard, Qian-Yi Wang, Guijie Zhu, A. Saei, Liang-Liang Sun, M. Mahmoudi · 2025 · Nature Protocols
  37. Releasing N-glycan from Peptide N-terminus by N-terminal Succinylation Assisted Enzymatic Deglycosylation
    Yejing Weng, Zhigang Sui, Hao Jiang, Yichu Shan, Lingfan Chen, Shen Zhang, Lihua Zhang, Yukui Zhang · 2015 · Scientific Reports
  38. Survey of Shotgun Proteomics
    Fábio César Sousa Nogueira, Gilberto B. Domont · 2014 · Methods in molecular biology
  39. Middle-Down 193-nm Ultraviolet Photodissociation for Unambiguous Antibody Identification and its Implications for Immunoproteomic Analysis
    Victoria C. Cotham, Andrew P. Horton, Jiwon Lee, George Georgiou, Jennifer S. Brodbelt · 2017 · Analytical Chemistry
  40. Proteome Variation with Collagen Yield in Ancient Bone
    Noemi Procopio, Rachel Hopkins, Virginia L. Harvey, Michael Buckley · 2021 · Journal of Proteome Research
  41. Simultaneous analysis of cellular glycoproteome and phosphoproteome in cervical carcinoma by one-pot specific enrichment
    Huimin Chu, Haoyang Zheng, Nianrong Sun, Chunhui Deng · 2021 · Analytica Chimica Acta
  42. Mass Spectrometry-Based Chemical Proteomics for Drug Target Discoveries
    Ivan I. Fedorov, Victoria I. Lineva, Irina A. Tarasova, Mikhail V. Gorshkov · 2022 · Biochemistry (Moscow)
  43. Present and Future Perspectives on Mass Spectrometry for Clinical Microbiology.
    Megan S. Gant, J. Chamot-Rooke · 2024 · Microbes and infection
  44. A Structures for Lossless Ion Manipulations (SLIM) Module for Collision Induced Dissociation
    Ian Webb, Sandilya Garimella, Randolph V. Norheim, Erin Shammel Baker, Yehia Ibrahim, Richard D. Smith · 2016 · Journal of the American Society for Mass Spectrometry
  45. Posttranscriptional Regulation in Adenovirus Infected Cells
    Hongxing Zhao, Anne Konzer, Jia Mi, Moashan Chen, Ulf Pettersson, Sara Bergström Lind · 2016 · Journal of Proteome Research
  46. Facile synthesis of Ti4+‐immobilized affinity silica nanoparticles for the highly selective enrichment of intact phosphoproteins
    Yanting He, Wei Liu, Lei Chen, Guo Lin, Qi Xiao, Chenling Gao, Jian‐Lin Wu, Zian Lin · 2017 · Journal of Separation Science
  47. Instant on-paper protein digestion during blood spot sampling
    Øystein Skjærvø, Cecilie Rosting, Trine Grønhaug Halvorsen, Léon Reubsaet · 2017 · The Analyst
  48. Mapping the Small Molecule Interactome by Mass Spectrometry
    Hope A. Flaxman, Christina M. Woo · 2017 · Biochemistry
  49. The proteome and its dynamics: A missing piece for integrative multi-omics in schizophrenia
    K. Borgmann-Winter, Kai Wang, Sabyasachi Bandyopadhyay, A. D. Torshizi, I. Blair, C. Hahn · 2019 · Schizophrenia Research
  50. Study of the venom proteome of Vipera ammodytes ammodytes (Linnaeus, 1758): A qualitative overview, biochemical and biological profiling
    Kristina Gopčević, Ivanka Karadžić, Lidija Izrael-Živković, Ana B. Medić, Aleksandra Isaković, M. Popovic, Dušan Kekić, Tatjana Stanojković, Amela Hozić, Mario Cindrić · 2020 · Comparative Biochemistry and Physiology Part D Genomics and Proteomics
  51. Putting Proteomics Into Immunotherapy for Glioblastoma
    Liang Chen, Di Qin, Xinyu Guo, Qi-Xue Wang, Jie Li · 2021 · Frontiers in Immunology
  52. ProteinInferencer: Confident protein identification and multiple experiment comparison for large scale proteomics projects
    Yaoyang Zhang, Tao Xu, Bing Shan, Jonathan Ross Hart, Aaron Aslanian, Xuemei Han, Chenggong Zong, Haomin Li, Howard Choi, Dong Wang et al. · 2015 · Journal of Proteomics
  53. Application of the Human Proteome in Disease, Diagnosis, and Translation into Precision Medicine: Current Status and Future Prospects
    Yawen Xie, Xiaoying Chen, Maokai Xu, Xiaochun Zheng · 2025 · Biomedicines
  54. Fine Tuning of Proteomic Technologies to Improve Biological Findings: Advancements in 2011–2013
    Janice Mayne, Amanda E. Starr, Zhibin Ning, Rui Chen, Cheng‐Kang Chiang, Daniel Figeys · 2013 · Analytical Chemistry
  55. Formation of Gaseous Peptide Ions from Electrospray Droplets: Competition between the Ion Evaporation Mechanism and Charged Residue Mechanism
    Elnaz Aliyari, Lars Konermann · 2022 · Analytical Chemistry
  56. Deciphering the Atlas of Post-Translational Modification in Sugarcane
    Qibin Wu, Zhenxiang Li, Jingtao Yang, Fu Xu, Xueqin Fu, Liping Xu, Chuihuai You, Dongjiao Wang, Yachun Su, Youxiong Que · 2023 · Journal of Agricultural and Food Chemistry
  57. Alzheimer proteopathic tau seeds are biochemically a forme fruste of mature paired helical filaments
    Mukesh Kumar, Noé Quittot, Simon Dujardin, Christoph N. Schlaffner, Arthur Viodé, Anne E. Wiedmer, Pieter Beerepoot, Joshua E Chun, Calina A. Glynn, Analiese R. Fernandes et al. · 2024 · Brain
  58. Recent progress in marine chondroitin sulfate, dermatan sulfate, and chondroitin sulfate/dermatan sulfate hybrid chains as potential functional foods and therapeutic agents
    Qingxia Yuan, Xiang Dong Shi, Haiqiong Ma, Yue Yao, Baoshun Zhang, Longyan Zhao · 2024 · International Journal of Biological Macromolecules
  59. Metaproteomics: Extracting and Mining Proteome Information to Characterize Metabolic Activities in Microbial Communities
    Paul E. Abraham, Richard J. Giannone, Weili Xiong, Robert L. Hettich · 2014 · Current Protocols in Bioinformatics
  60. NeuCode Labeling in Nematodes: Proteomic and Phosphoproteomic Impact of Ascaroside Treatment in Caenorhabditis elegans
    Timothy W. Rhoads, A. Krishna Prasad, Nicholas W. Kwiecien, Anna E. Merrill, Kelson Zawack, Michael S. Westphall, Frank C. Schroeder, Judith E. Kimble, Joshua J. Coon · 2015 · Molecular & Cellular Proteomics
  61. Proteomics strategies for bipolar disorder evaluation: From sample preparation to validation
    Jemmyson Romário de Jesus, Gustavo de Souza Pessôa, Alessandra Sussulini, José Luís Capelo, Marco Aurélio Zezzi Arruda · 2016 · Journal of Proteomics
  62. A multidimensional liquid chromatography–tandem mass spectrometry platform to improve protein identification in high-throughput shotgun proteomics
    Anna Laura Capriotti, Chiara Cavaliere, Alberto Cavazzini, Francesco Gasparrini, Giuseppe Pierri, Susy Piovesana, Aldo Laganà · 2017 · Journal of Chromatography A
  63. Acetone/Isopropanol Photoinitiating System Enables Tunable Disulfide Reduction and Disulfide Mapping via Tandem Mass Spectrometry
    Sarju Adhikari, Xiaoyue Yang, Yu Xia · 2018 · Analytical Chemistry
  64. Protein-Level Statistical Analysis of Quantitative Label-Free Proteomics Data with ProStaR
    Samuel Wieczorek, Florence Combes, Hélène Borges, Thomas Bürger · 2019 · Methods in molecular biology
  65. A thiol-ene microfluidic device enabling continuous enzymatic digestion and electrophoretic separation as front-end to mass spectrometric peptide analysis
    Nan Lü, Drago Sticker, Andreas Kretschmann, Nickolaj J. Petersen, Jörg Peter Kutter · 2020 · Analytical and Bioanalytical Chemistry
  66. Partial Isotope Profiles Are Sufficient for Protein Turnover Analysis Using Closed-Form Equations of Mass Isotopomer Dynamics
    Rovshan G. Sadygov · 2020 · Analytical Chemistry
  67. An Update of the Virion Proteome of Kaposi Sarcoma-Associated Herpesvirus
    Romina Nabiee, Basir Syed, Jesus Ramirez Castano, Rukhsana Lalani, Jennifer E. Totonchy · 2020 · Viruses
  68. Microvolume trace environmental analysis using peak-focusing online solid-phase extraction–nano-liquid chromatography–high-resolution mass spectrometry
    Michael A. Stravs, Jonas Mechelke, P. Lee Ferguson, Heinz Singer, Juliane Hollender · 2016 · Analytical and Bioanalytical Chemistry
  69. From Synapse to Function: A Perspective on the Role of Neuroproteomics in Elucidating Mechanisms of Drug Addiction
    Luis A. Natividad, Matthew W. Buczynski, Daniel B. McClatchy, John R. Yates · 2018 · Proteomes
  70. Evaluation of dimethyl sulfoxide (DMSO) as a mobile phase additive during top 3 label-free quantitative proteomics
    Dominika Strzelecka, Stephen W. Holman, Claire E. Eyers · 2015 · International Journal of Mass Spectrometry
  71. Proteomic Discovery and Validation of Novel Fluid Biomarkers for Improved Patient Selection and Prediction of Clinical Outcomes in Alzheimer’s Disease Patient Cohorts
    2022
  72. Profiling B-Type Natriuretic Peptide Cleavage Peptidoforms in Human Plasma by Capillary Electrophoresis with Electrospray Ionization Mass Spectrometry
    Zhang, Shenyan, Raedschelders, Koen, Santos, Marcia, Van Eyk, Jennifer E. · 2017 · Journal of Proteome Research
  73. EnvCNN: A Convolutional Neural Network Model for Evaluating Isotopic Envelopes in Top-Down Mass-Spectral Deconvolution
    Abdul Rehman Basharat, Xia Ning, Xiaowen Liu · 2020 · Analytical Chemistry
  74. Prospects of Using High-Throughput Proteomics to Underpin the Discovery of Animal Host–Nematode Interactions
    Tao Wang, Robin B. Gasser · 2021 · Pathogens
  75. Biopharmaceutical Quality Control with Mass Spectrometry
    Shulei Liu, Benjamin Luke Schulz · 2021 · Bioanalysis
  76. Proteomic Signature of Extracellular Vesicles Associated with Colorectal Cancer
    Natalia A. Soloveva, Svetlana E. Novikova, Tatiana E. Farafonova, Olga V. Tikhonova, Victor Gavrilovich Zgoda · 2023 · Molecules
  77. Routine Workflow of Spatial Proteomics on Micro-formalin-Fixed Paraffin-Embedded Tissues
    Hao Chen, Yuefei Zhang, Haichao Zhou, Weiran Chen, Jiayi Peng, Yang Feng, Linyuan Fan, Jun Li, Jin Zi, Yan Ren et al. · 2023 · Analytical Chemistry
  78. GreenPhos, a universal method for in-depth measurement of plant phosphoproteomes with high quantitative reproducibility
    Xiaoxiao Duan, Yuanya Zhang, Xiahe Huang, Xiao Ma, Hui Gao, Yan Wang, Zhen Xiao, Chengcheng Huang, Zhongshu Wang, Bolong Li et al. · 2023 · Molecular Plant
  79. A pre-trained large generative model for translating single-cell transcriptomes to proteomes
    Linjing Liu, Wei Li, Fang Wang, Yiming Li, Long-Kai Huang, Ka‐Chun Wong, Fan Yang, Jianhua Yao · 2025 · Nature Biomedical Engineering
  80. Mass spectrometry-based protein identification with accurate statistical significance assignment
    Gelio Alves, Yi‐Kuo Yu · 2014 · Bioinformatics
  81. Using SEQUEST with Theoretically Complete Sequence Databases
    Rovshan G. Sadygov · 2015 · Journal of the American Society for Mass Spectrometry
  82. Comprehensive analysis of the peanut allergome combining 2-DE gel-based and gel-free proteomics
    Gianfranco Mamone, Luigia Di Stasio, Salvatore De Caro, Gianluca Picariello, Maria Adalgisa Nicolai, Pasquale Ferranti · 2018 · Food Research International
  83. Global Quantification of Intact Proteins via Chemical Isotope Labeling and Mass Spectrometry
    Zheyi Liu, Ruimin Wang, Jing Liu, Rui-Xiang Sun, Fangjun Wang · 2019 · Journal of Proteome Research
  84. How to effectively prepare a sample for bottom-up proteomic analysis of nanoparticle protein corona? A critical review
    Joanna Kruszewska, Joanna Zajda, Magdalena Matczuk · 2021 · Talanta
  85. Accelerated protein digestion and separation with picoliter volume utilizing nanofluidics
    Koki Yamamoto, Kyojiro Morikawa, Hisashi Shimizu, Hiroki Sano, Yutaka Kazoe, Takehiko Kitamori · 2022 · Lab on a Chip
  86. Poisson Model To Generate Isotope Distribution for Biomolecules
    Rovshan G. Sadygov · 2017 · Journal of Proteome Research
  87. Large Scale Proteomic Data and Network-Based Systems Biology Approaches to Explore the Plant World
    Dario Di Silvestre, Andrea Bergamaschi, Edoardo Niccolò Bellini, Pierluigi Mauri · 2018 · Proteomes
  88. Integration of Hyphenated Techniques for Characterizing and Chemical Profiling of Natural Products
    Ashish Kumar Verma, Amrit Chattopadhaya, Priyamvada Gupta, Harshita Tiwari, Swati Singh, Lalit Kumar, Vibhav Gautam · 2025 · Chemistry & Biodiversity
  89. Mass spectrometry-based characterization of histone post-translational modification
    Wensi Zhao, Jun Zhang, Kaifeng Chen, Jian Yuan, Linhui Zhai, Minjia Tan · 2025 · Current Opinion in Chemical Biology
  90. Two-dimensional chromatographic analysis using three second-dimension columns for continuous comprehensive analysis of intact proteins
    Zaifang Zhu, Huang Chen, Jiangtao Ren, Juan J. Lu, Congying Gu, Kyle B. Lynch, Si Wu, Zhe Wang, Chengxi Cao, Shaorong Liu · 2017 · Talanta
  91. Mass Spectrometry-Based Structural Proteomics for Metal Ion/Protein Binding Studies
    Yanchun Lin, Michael L. Gross · 2022 · Biomolecules
  92. Proteomics as a tool to improve novel insights into skin diseases: what we know and where we should be going
    Sheng-Yuan Zheng, Ximin Hu, Kun Huang, Zi-han Li, Qing-ning Chen, Rong-hua Yang, Kun Xiong · 2022 · Frontiers in Surgery
  93. Comparison of solid-phase extraction methods for efficient purification of phosphopeptides with low sample amounts
    Fanni Bugyi, Gábor Tóth, Kinga Bernadett Kovács, László Drahos, Lilla Turiák · 2022 · Journal of Chromatography A
  94. Identification of 113 new histone marks by CHiMA, a tailored database search strategy
    Jinjun Gao, Xinlei Sheng, Jianfeng Du, Di Zhang, Chang Han, Yue Chen, Chu Wang, Yingming Zhao · 2023 · Science Advances
  95. Phospho-Analyst: An Interactive, Easy-to-Use Web Platform To Analyze Quantitative Phosphoproteomics Data
    Haijian Zhang, Joel R. Steele, Hossein Valipour Kahrood, Deanna Deveson Lucas, Anup D. Shah, Ralf B. Schittenhelm · 2023 · Journal of Proteome Research
  96. Recent advancements in disulfide bridge characterization: Insights from mass spectrometry
    Sachin Chaturvedi, Sanket Bawake, Nitish Sharma · 2024 · Rapid Communications in Mass Spectrometry
  97. Myoglobin as a molecular biomarker for meat authentication and traceability
    Sara Ragucci, Nicola Landi, Antimo Di Maro · 2024 · Food Chemistry
  98. Quantitative Top-down Proteomics Revealed Kinase Inhibitor-induced Proteoform-level Changes in Cancer Cells
    Trishika Chowdhury, Kellye A. Cupp-Sutton, Yanting Guo, Kevin Gao, Zhi-Tao Zhao, Anthony W. G. Burgett, Si Wu · 2024 · Journal of Proteome Research
  99. Allium cepa L. Response to Sodium Selenite (Se(IV)) Studied in Plant Roots by a LC-MS-Based Proteomic Approach
    Jakub Karasiński, Kazimierz Wróbel, Alma Rosa Corrales Escobosa, Anna Konopka, Ewa Bulska, Katarzyna Wróbel · 2017 · Journal of Agricultural and Food Chemistry
  100. Food Forensics: Using Mass Spectrometry To Detect Foodborne Protein Contaminants, as Exemplified by Shiga Toxin Variants and Prion Strains
    Christopher J. Silva · 2018 · Journal of Agricultural and Food Chemistry