Protein Analysis by Shotgun/Bottom-up Proteomics

Zhang, Yaoyang, Fonslow, Bryan R., Shan, Bing, Baek, Moon-Chang, Yates, John R.·2013·Chemical Reviews

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Items 101–200 of 1,000

  1. Recent advances (2019–2021) of capillary electrophoresis‐mass spectrometry for multilevel proteomics
    Daoyang Chen, Elijah N. McCool, Zhichang Yang, Xiaojing Shen, Rachele A. Lubeckyj, Tian Xu, Qianjie Wang, Liangliang Sun · 2021 · Mass Spectrometry Reviews
  2. Recent advances in covalent organic frameworks for separation and analysis of complex samples
    Jiaxi Wang, Jie Li, Mingxia Gao, Xiangmin Zhang · 2018 · TrAC Trends in Analytical Chemistry
  3. A guide to mass spectrometric analysis of extracellular vesicle proteins for biomarker discovery
    Iqbal Jalaludin, David M. Lubman, Jeongkwon Kim · 2021 · Mass Spectrometry Reviews
  4. A Practical Guide to Small Protein Discovery and Characterization Using Mass Spectrometry
    Christian H. Ahrens, Joseph T. Wade, Matthew M. Champion, Julian D. Langer · 2021 · Journal of Bacteriology
  5. High-Throughput Analysis of Intact Human Proteins Using UVPD and HCD on an Orbitrap Mass Spectrometer
    Cleland, Timothy P., DeHart, Caroline J., Fellers, Ryan T., VanNispen, Alexandra J., Greer, Joseph B., LeDuc, Richard D., Parker, W. Ryan, Thomas, Paul M., Kelleher, Neil L., Brodbelt, Jennifer S. · 2017 · Journal of Proteome Research
  6. Systematic optimization of long gradient chromatography mass spectrometry for deep analysis of brain proteome
    Wang, Hong, Yang, Yanling, Li, Yuxin, Bai, Bing, Wang, Xusheng, Tan, Haiyan, Liu, Tao, Beach, Thomas G., Peng, Junmin, Wu, Zhiping · 2015 · Journal of Proteome Research
  7. The story of protein arginine methylation: characterization, regulation, and function
    Chao Peng, Catherine C. L. Wong · 2017 · Expert Review of Proteomics
  8. An integrative omics perspective for the analysis of chemical signals in ecological interactions
    Andrés Eduardo Brunetti, Fausto Carnevale Neto, Miriam Corina Vera, C. Taboada, Daniel Petinatti Pavarini, Anelize Bauermeister, Norberto Peporine Lopes · 2017 · Chemical Society Reviews
  9. Molecular and functional signatures in a novel Alzheimer’s disease mouse model assessed by quantitative proteomics
    Kim, Dong Kyu, Park, Joonho, Han, Dohyun, Yang, Jinhee, Kim, Ahbin, Woo, Jongmin, Kim, Youngsoo, Mook-Jung, Inhee · 2018 · Molecular Neurodegeneration
  10. Single-step Enrichment by Ti4+-IMAC and Label-free Quantitation Enables In-depth Monitoring of Phosphorylation Dynamics with High Reproducibility and Temporal Resolution
    Erik L. de Graaf, Piero Giansanti, Maarten A. F. Altelaar, Albert J. R. Heck · 2014 · Molecular & Cellular Proteomics
  11. Fiber-Type Shifting in Sarcopenia of Old Age: Proteomic Profiling of the Contractile Apparatus of Skeletal Muscles
    Paul Dowling, Stephen Gargan, Dieter Swandulla, Kay Ohlendieck · 2023 · International Journal of Molecular Sciences
  12. The Dawn of Metal-Oxo Clusters as Artificial Proteases: From Discovery to the Present and Beyond
    Francisco de Azambuja, Jens Moons, Tatjana N. Parac‐Vogt · 2021 · Accounts of Chemical Research
  13. Unveiling the future of metabolic medicine: omics technologies driving personalized solutions for precision treatment of metabolic disorders
    Samradhi Singh, Devojit Kumar Sarma, Vinod Verma, Ravinder Nagpal, Manoj Kumar · 2023 · Biochemical and Biophysical Research Communications
  14. Implementation of Ultraviolet Photodissociation on a Benchtop Q Exactive Mass Spectrometer and Its Application to Phosphoproteomics
    Kyle L. Fort, Andrey Dyachenko, Clément M. Potel, Eleonora Corradini, Fabio Marino, Arjan Barendregt, Alexander Makarov, Richard A. Scheltema, Albert J. R. Heck · 2016 · Analytical Chemistry
  15. Current Trends in the Analysis of Post-translational Modifications
    Dávid Virág, Borbála Dalmadi Kiss, Károly Vékey, László Drahos, Imre Klebovich, István Antal, Krisztina Ludányi · 2019 · Chromatographia
  16. Multimodal Imaging Based on Vibrational Spectroscopies and Mass Spectrometry Imaging Applied to Biological Tissue: A Multiscale and Multiomics Review
    Michael Tuck, Landry Blanc, Rita Touti, Nathan Heath Patterson, Sebastiaan Van Nuffel, Sandrine Villette, Jean‐Christophe Taveau, Andreas Römpp, Alain Brunelle, Sophie Lecomte et al. · 2020 · Analytical Chemistry
  17. Overview and Considerations in Bottom-Up Proteomics
    Rachel M. Miller, L. Smith · 2022 · In Analysis
  18. Identification of EDIL3 on extracellular vesicles involved in breast cancer cell invasion.
    Jeong-Eun Lee, Pyong-Gon Moon, Young-Eun Cho, Young-Bum Kim, In-San Kim, Hoyong Park, Moon-Chang Baek · 2016 · Journal of Proteomics
  19. Urine Sample Preparation in 96-Well Filter Plates for Quantitative Clinical Proteomics
    Yanbao Yu, Moo‐Jin Suh, Patricia M. Sikorski, Keehwan Kwon, Karen E. Nelson, Rembert Pieper · 2014 · Analytical Chemistry
  20. The Extracellular Matrix of Fungal Biofilms
    Kaitlin F. Mitchell, Robert Żarnowski, David R. Andes · 2016 · Advances in experimental medicine and biology
  21. Middle‐down hybrid chromatography/tandem mass spectrometry workflow for characterization of combinatorial post‐translational modifications in histones
    Sidoli, Simone, Schwämmle, Veit, Ruminowicz, Chrystian, Hansen, Thomas A., Wu, Xudong, Helin, Kristian, Jensen, Ole N. · 2014 · PROTEOMICS
  22. Label-free Quantification of Proteins in Single Embryonic Cells with Neural Fate in the Cleavage-Stage Frog (Xenopus laevis) Embryo using Capillary Electrophoresis Electrospray Ionization High-Resolution Mass Spectrometry (CE-ESI-HRMS)
    Camille Lombard‐Banek, Sushma Reddy, Sally A. Moody, Péter Nemes · 2016 · Molecular & Cellular Proteomics
  23. Advances in enrichment methods for mass spectrometry-based proteomics analysis of post-translational modifications
    Jessica Brandi, Roberta Noberini, Tiziana Bonaldi, Daniela Cecconi · 2022 · Journal of Chromatography A
  24. Extracellular Vesicles from Neurosurgical Aspirates Identifies Chaperonin Containing TCP1 Subunit 6A as a Potential Glioblastoma Biomarker with Prognostic Significance
    Susannah M. Hallal, Benjamin P. Russell, Heng Wei, Maggie Yuk T. Lee, Christopher W. Toon, Joanne S. Sy, Brindha Shivalingam, Michael E. Buckland, Kimberley L. Alexander · 2018 · PROTEOMICS
  25. A comprehensive pipeline for translational top-down proteomics from a single blood draw
    Toby, Timothy K., Fornelli, Luca, Srzentić, Kristina, DeHart, Caroline J., Levitsky, Josh, Friedewald, John, Kelleher, Neil L. · 2019 · Nature Protocols
  26. Middle-down approach: a choice to sequence and characterize proteins/proteomes by mass spectrometry
    P. Boomathi Pandeswari, Varatharajan Sabareesh · 2019 · RSC Advances
  27. One-Tip enables comprehensive proteome coverage in minimal cells and single zygotes
    Zilu Ye, Pierre Sabatier, Javier Martin Gonzalez, Akihiro Eguchi, Maico Y. Lechner, Ole Østergaard, Jingsheng Xie, Yuan Guo, Lesley Schultz, Rafaela Truffer et al. · 2024 · Nature Communications
  28. Extracellular protein analysis of activated sludge and their functions in wastewater treatment plant by shotgun proteomics
    Peng Zhang, Yu Shen, Jinsong Guo, Chun Li, Han Wang, You‐Peng Chen, Peng Yan, Jixiang Yang, Fang Fang · 2015 · Scientific Reports
  29. Mass Spectrometry in Plant-omics
    Erin Gemperline, Caitlin Keller, Lingjun Li · 2016 · Analytical Chemistry
  30. Proteome Changes in Platelets After Pathogen Inactivation—An Interlaboratory Consensus
    Michel Prudent, Angelo D’Alessandro, Jean‐Pierre Cazenave, Dana V. Devine, Christian Gachet, Andreas Greinacher, Niels Lion, Peter Schubert, Leif Steil, Thomas Thiele et al. · 2014 · Transfusion Medicine Reviews
  31. Mapping the Energetic Epitope of an Antibody/Interleukin-23 Interaction with Hydrogen/Deuterium Exchange, Fast Photochemical Oxidation of Proteins Mass Spectrometry, and Alanine Shave Mutagenesis
    Jing Li, Hui Wei, Stanley R. Krystek, Derek Bond, Ty Brender, Daniel Cohen, Jena Feiner, Nels B. Hamacher, Johanna Harshman, Richard Y.‐C. Huang et al. · 2017 · Analytical Chemistry
  32. Extensive and Accurate Benchmarking of DIA Acquisition Methods and Software Tools Using a Complex Proteomic Standard
    Clarisse Gotti, Florence Roux‐Dalvai, Charles Joly-Beauparlant, Loïc Mangnier, Mickaël Leclercq, Arnaud Droit · 2021 · Journal of Proteome Research
  33. An in-depth snake venom proteopeptidome characterization: Benchmarking Bothrops jararaca
    Carolina Alves Nicolau, Paulo C. Carvalho, Inácio L.M. Junqueira-de-Azevedo, André Teixeira‐Ferreira, Magno Junqueira, Jonás Perales, Ana Gisele C. Neves‐Ferreira, Richard Hemmi Valente · 2016 · Journal of Proteomics
  34. Instrumentation at the Leading Edge of Proteomics
    Trenton M. Peters-Clarke, Joshua J. Coon, Nicholas McIlvain Riley · 2024 · Analytical Chemistry
  35. Considerations for constructing a protein sequence database for metaproteomics
    J. Alfredo Blakeley‐Ruiz, Manuel Kleiner · 2022 · Computational and Structural Biotechnology Journal
  36. Thousand and one ways to quantify and compare protein abundances in label-free bottom-up proteomics
    Mélisande Blein‐Nicolas, Michel Zivy · 2016 · Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics
  37. Proteopeptidomic, Functional and Immunoreactivity Characterization of Bothrops moojeni Snake Venom: Influence of Snake Gender on Venom Composition
    Fernanda Gobbi Amorim, Tássia R. Costa, Dominique Baiwir, Edwin De Pauw, Loïc Quinton, Suely Vilela Sampaio · 2018 · Toxins
  38. Applications of Copper-Catalyzed Click Chemistry in Activity-Based Protein Profiling
    Julianne Martell, Eranthie Weerapana · 2014 · Molecules
  39. Applications and challenges of forensic proteomics
    Eric D. Merkley, David S. Wunschel, Karen L. Wahl, Kristin H. Jarman · 2019 · Forensic Science International
  40. Physicochemical characterization of biopharmaceuticals
    Maria Kristina Parr, Othman Montacir, Houda Montacir · 2016 · Journal of Pharmaceutical and Biomedical Analysis
  41. Dissecting ribosomal particles throughout the kingdoms of life using advanced hybrid mass spectrometry methods
    Michiel van de Waterbeemd, Sem Tamara, Kyle L. Fort, Eugen Damoc, Vojtěch Franc, P. Bieri, Martin Peter Itten, Alexander Makarov, Nenad Ban, Albert J. R. Heck · 2018 · Nature Communications
  42. Challenges and Advances in the Fabrication of Monolithic Bioseparation Materials and their Applications in Proteomics Research
    Shujuan Ma, Ya Li, Chen Ma, Yan Wang, Junjie Ou, Mingliang Ye · 2019 · Advanced Materials
  43. Proper imputation of missing values in proteomics datasets for differential expression analysis
    Mingyi Liu, Ashok R. Dongré · 2020 · Briefings in Bioinformatics
  44. Single-cell omics: experimental workflow, data analyses and applications
    Fengying Sun, Haoyan Li, Dongqing Sun, Shaliu Fu, Lei Gu, Xin Shao, Qinqin Wang, Xin Dong, Bin Duan, Feiyang Xing et al. · 2024 · Science China Life Sciences
  45. GeLC-MS/MS Analysis of Complex Protein Mixtures
    Monika Dzieciątkowska, Ryan C. Hill, Kirk Charles Hansen · 2014 · Methods in molecular biology
  46. MS-Based Proteomic Analysis of Serum and Plasma: Problem of High Abundant Components and Lights and Shadows of Albumin Removal
    Monika Pietrowska, Agata Wlosowicz, Marta Gawin, Piotr Widłak · 2019 · Advances in experimental medicine and biology
  47. Exploiting Interactions between Polyoxometalates and Proteins for Applications in (Bio)chemistry and Medicine
    Sarah Lentink, David E. Salazar Marcano, Mhamad Aly Moussawi, Tatjana N. Parac‐Vogt · 2023 · Angewandte Chemie International Edition
  48. Bacillus thuringiensis Cry1Da_7 and Cry1B.868 Protein Interactions with Novel Receptors Allow Control of Resistant Fall Armyworms, Spodoptera frugiperda (J.E. Smith)
    Yanfei Wang, Jinling Wang, Xiaoran Fu, Jeffrey R. Nageotte, Jennifer Silverman, Eric C. Bretsnyder, Danqi Chen, Timothy J. Rydel, Gregory J. Bean, Ke Sherry Li et al. · 2019 · Applied and Environmental Microbiology
  49. CharmeRT: Boosting Peptide Identifications by Chimeric Spectra Identification and Retention Time Prediction
    Viktoria Dorfer, Sergey Maltsev, Stephan Winkler, Karl Mechtler · 2018 · Journal of Proteome Research
  50. Multiplexed imaging mass spectrometry of the extracellular matrix using serial enzyme digests from formalin-fixed paraffin-embedded tissue sections
    Cassandra L. Clift, Richard R. Drake, Anand S. Mehta, Peggi M. Angel · 2020 · Analytical and Bioanalytical Chemistry
  51. Innovations in CAZyme gene diversity and its modification for biorefinery applications
    Dixita Chettri, Ashwani Kumar Verma, Anil Kumar Verma · 2020 · Biotechnology Reports
  52. Dynamic Proteomics
    W.E. Holmes, Thomas E. Angel, K.W. Li, M K Hellerstein · 2015 · Methods in enzymology on CD-ROM/Methods in enzymology
  53. Proteomics and peptidomics: moving toward precision medicine in urological malignancies
    Ashley Di Meo, Maria Diamandis Pasic, George Makram Yousef · 2016 · Oncotarget
  54. Lipid–oligonucleotide conjugates for bioapplications
    Xiaowei Li, Kejun Feng, Long Li, Lu Yang, Xiaoshu Pan, Hoda Safari Yazd, Cheng Cui, Juan Li, Leonid L. Moroz, Yujia Sun et al. · 2020 · National Science Review
  55. Systems and synthetic biology to elucidate secondary metabolite biosynthetic gene clusters encoded in Streptomyces genomes
    Namil Lee, Soonkyu Hwang, Woori Kim, Yongjae Lee, Ji Hun Kim, Suhyung Cho, Hyun Uk Kim, Yeo Joon Yoon, Min‐Kyu Oh, Bernhard Ørn Palsson et al. · 2021 · Natural Product Reports
  56. Current Methods of Post-Translational Modification Analysis and Their Applications in Blood Cancers
    Katie Dunphy, Paul Dowling, Despina Bazou, Peter O’Gorman · 2021 · Cancers
  57. Merging automation and fundamental discovery into the design–build–test–learn cycle of nontraditional microbes
    Nicolás Gurdo, Daniel C. Volke, Pablo I. Nikel · 2022 · Trends in biotechnology
  58. Glycoprotein Enrichment Analytical Techniques
    R. Zhu, Lauren G. Zacharias, Kerry M. Wooding, Wenjing Peng, Yehia S. Mechref · 2017 · Methods in enzymology on CD-ROM/Methods in enzymology
  59. Assessment of Sample Preparation Bias in Mass Spectrometry-Based Proteomics
    Frank Klont, Linda Bras, Justina Clarinda Wolters, Sara Ongay, Rainer Bischoff, Gyorgy Bela Halmos, Peter L. Horvatovich · 2018 · Analytical Chemistry
  60. Selenium-Encoded Isotopic Signature Targeted Profiling
    Jinjun Gao, Fan Yang, Jin−Teng Che, Yu Han, Yankun Wang, Nan Chen, Daniel W. Bak, Shuchang Lai, Xiao Xie, Eranthie Weerapana et al. · 2018 · ACS Central Science
  61. Optimization of Statistical Methods Impact on Quantitative Proteomics Data
    Anna Pursiheimo, Anni P. Vehmas, Saira Afzal, Tomi Suomi, Thaman Chand, Leena Strauss, Matti H. POUTANEN, Anne Rokka, Garry L. Corthals, Laura L. Elo · 2015 · Journal of Proteome Research
  62. Sample Clean‐up Strategies for ESI Mass Spectrometry Applications in Bottom‐up Proteomics: Trends from 2012 to 2016
    Ria Marni Tubaon, Paul R. Haddad, Joselito P. Quirino · 2017 · PROTEOMICS
  63. High sensitivity top–down proteomics captures single muscle cell heterogeneity in large proteoforms
    Jake A. Melby, Kyle A. Brown, Zachery R. Gregorich, David S. Roberts, Emily A. Chapman, Lauren E. Ehlers, Zhan Gao, Eli J. Larson, Yutong Jin, Justin R. Lopez et al. · 2023 · Proceedings of the National Academy of Sciences
  64. Recent developments and applications of capillary and microchip electrophoresis in proteomic and peptidomic analyses
    Sille Štěpánová, Václav Kašička · 2015 · Journal of Separation Science
  65. The secretome of skeletal muscle cells: A systematic review
    Antoine Florin, Cécile Lambert, Christelle Sanchez, Jérémie Zappia, Nancy Durieux, Antonio Martins Tieppo, Ali Mobasheri, Yves Edgard Henrotin · 2020 · Osteoarthritis and Cartilage Open
  66. Exploring Trichoderma and Aspergillus secretomes: Proteomics approaches for the identification of enzymes of biotechnological interest
    Nicholas de Mojana di Cologna, Diana Paola Gómez‐Mendoza, Fabiana Fonseca Zanoelo, Giovana Cristina Giannesi, Nelciele Cavalieri de Alencar Guimarães, Leonora Rios de Souza Moreira, Edivaldo Ximenes Ferreira Filho, Carlos André Ornelas Ricart · 2017 · Enzyme and Microbial Technology
  67. Oxidative Modification of Proteins: From Damage to Catalysis, Signaling, and Beyond
    Marilene Demasi, Ohára Augusto, Etelvino José Henriques Bechara, Renata Naporano Bicev, Fernanda M. Cerqueira, Fernanda Marques da Cunha, Ana Denicola, Fernando Gomes, Sayuri Miyamoto, Luís Eduardo Soares Netto et al. · 2021 · Antioxidants and Redox Signaling
  68. The identification and characterization of non-coding and coding RNAs and their modified nucleosides by mass spectrometry
    Kirk W. Gaston, Patrick A. Limbach · 2014 · RNA Biology
  69. Proteomic and Metaproteomic Approaches to Understand Host–Microbe Interactions
    Amanda E. Starr, Shelley A. Deeke, Leyuan Li, Xu Zhang, Rachid Daoud, James Ryan, Zhibin Ning, Kai Cheng, Linh V. H. Nguyen, Elias Abou-Samra et al. · 2017 · Analytical Chemistry
  70. Peptidomic analyses: The progress in enrichment and identification of endogenous peptides
    Jiaxi Peng, Hongyan Zhang, Huan Niu, Ren’an Wu · 2020 · TrAC Trends in Analytical Chemistry
  71. Automated proteomic sample preparation: The key component for high throughput and quantitative mass spectrometry analysis
    Qin Fu, Christopher I. Murray, Oleg A. Karpov, Jennifer E. Van Eyk · 2021 · Mass Spectrometry Reviews
  72. Studying protein structure and function by native separation–mass spectrometry
    Guusje van Schaick, Rob Haselberg, Govert W. Somsen, Manfred Wuhrer, Elena Domínguez‐Vega · 2022 · Nature Reviews Chemistry
  73. Selenium: From fluorescent probes to biomedical application
    Junping Wang, Mingkai Chen, Zhongyang Zhang, Li Ma, Tianfeng Chen · 2023 · Coordination Chemistry Reviews
  74. Toward biotechnology in space: High-throughput instruments for in situ biological research beyond Earth
    Fathi Karouia, Kianoosh Peyvan, Andrew Pohorille · 2017 · Biotechnology Advances
  75. Omics Approaches to Assess Flavor Development in Cheese
    Rania Anastasiou, Μαρία Κάζου, Marina D. Georgalaki, Anastasios Aktypis, Γεωργία Ζουμποπούλου, Effie Tsakalidou · 2022 · Foods
  76. High-resolution ultrahigh-pressure long column reversed-phase liquid chromatography for top-down proteomics
    Shen, Yufeng, Tolić, Nikola, Piehowski, Paul D., Shukla, Anil K., Kim, Sangtae, Zhao, Rui, Qu, Yi, Robinson, Errol, Smith, Richard D., Paša-Tolić, Ljiljana · 2017 · Journal of Chromatography A
  77. Roles of E3 Ubiquitin Ligases in Plant Responses to Abiotic Stresses
    Shuang Wang, Xiaoyan Lv, Jialin Zhang, Daniel Chen, Sixue Chen, Guoquan Fan, Chunquan Ma, Yuguang Wang · 2022 · International Journal of Molecular Sciences
  78. Bottom-Up Proteomics (2013–2015): Keeping up in the Era of Systems Biology
    Janice Mayne, Zhibin Ning, Xu Zhang, Amanda E. Starr, Rui Chen, Shelley A. Deeke, Cheng‐Kang Chiang, Bo Xu, Ming Wen, Kai Cheng et al. · 2015 · Analytical Chemistry
  79. Sensitive Top-Down Proteomics Analysis of a Low Number of Mammalian Cells Using a Nanodroplet Sample Processing Platform
    Zhou, Mowei, Uwugiaren, Naomi, Williams, Sarah M., Moore, Ronald J., Zhao, Rui, Goodlett, David, Dapic, Irena, Paša-Tolić, Ljiljana, Zhu, Ying · 2020 · Analytical Chemistry
  80. Label-free quantitative phosphoproteomics with novel pairwise abundance normalization reveals synergistic RAS and CIP2A signaling
    Kauko, Otto, Laajala, Teemu Daniel, Jumppanen, Mikael, Hintsanen, Petteri, Suni, Veronika, Haapaniemi, Pekka, Corthals, Garry, Aittokallio, Tero, Westermarck, Jukka, Imanishi, Susumu Y. · 2015 · Scientific Reports
  81. The Negative Mode Proteome with Activated Ion Negative Electron Transfer Dissociation (AI-NETD)
    Nicholas McIlvain Riley, Matthew J. P. Rush, Christopher M. Rose, Alicia Richards, Nicholas W. Kwiecien, Derek J. Bailey, Alexander S. Hebert, Michael S. Westphall, Joshua J. Coon · 2015 · Molecular & Cellular Proteomics
  82. Proteomics in fisheries and aquaculture: An approach for food security
    Mehar Un Nissa, Nevil Pinto, Haifa Parkar, Mukunda Goswami, Sanjeeva Srivastava · 2021 · Food Control
  83. Understanding the Gastrointestinal Protective Effects of Polyphenols using Foodomics-Based Approaches
    Wenwen Zhang, Suzhen Qi, Xiaofeng Xue, Yahya Al Naggar, Liming Wu, Kai Wang · 2021 · Frontiers in Immunology
  84. The external face of Candida albicans : A proteomic view of the cell surface and the extracellular environment
    Ana Gil-Bona, Ahinara Amador-García, Concha Gil, Lucía Monteoliva · 2017 · Journal of Proteomics
  85. Optimizing Accuracy and Depth of Protein Quantification in Experiments Using Isobaric Carriers
    Harrison Specht, Nikolai Slavov · 2020 · Journal of Proteome Research
  86. Global profiling of phosphorylation-dependent changes in cysteine reactivity
    Esther K. Kemper, Yuanjin Zhang, Melissa M. Dix, Benjamin F. Cravatt · 2022 · Nature Methods
  87. Proteome Digestion Specificity Analysis for Rational Design of Extended Bottom-up and Middle-down Proteomics Experiments
    Ünige A. Laskay, Anna A. Lobas, Kristina Srzentić, Mikhail V. Gorshkov, Yury O. Tsybin · 2013 · Journal of Proteome Research
  88. Current trends in mass spectrometry of peptides and proteins: Application to veterinary and sports‐doping control
    Irene van den Broek, Marco Blokland, Merel A. Nessen, Saskia S. Sterk · 2013 · Mass Spectrometry Reviews
  89. Quantitative proteomic analysis identifies proteins and pathways related to neuronal development in differentiated SH-SY5Y neuroblastoma cells
    Jimmy Rodriguez Murillo, Livia Goto‐Silva, Aniel Sánchez, Fábio César Sousa Nogueira, Gilberto B. Domont, Magno Junqueira · 2017 · EuPA Open Proteomics
  90. Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements
    Shortreed, Michael R., Frey, Brian L., Scalf, Mark, Knoener, Rachel A., Cesnik, Anthony J., Smith, Lloyd M. · 2016 · Journal of Proteome Research
  91. Affinity Proteomics to Study Endogenous Protein Complexes: Pointers, Pitfalls, Preferences and Perspectives
    John LaCava, Kelly R. Molloy, Martin S. Taylor, Michal Domanski, Brian T. Chait, Michael P. Rout · 2015 · BioTechniques
  92. Supramolecular framework membrane for precise sieving of small molecules, nanoparticles and proteins
    Guohua Zhang, Xinyue Li, Gang Chen, Yue Zhang, Mingfeng Wei, Xiaofei Chen, Bao Li, Yuqing Wu, Lixin Wu · 2023 · Nature Communications
  93. Evolution of Mass Spectrometry Instruments and Techniques for Blood Proteomics
    Yang Chun Zhao, Qian Xue, Man Wang, Bo Meng, You Jiang, Rui Zhai, Yong Zhang, Xinhua Dai, Xiang Fang · 2023 · Journal of Proteome Research
  94. A Guide to MALDI Imaging Mass Spectrometry for Tissues
    Jessica L. Moore, Georgia Charkoftaki · 2023 · Journal of Proteome Research
  95. Proteomics analysis of bodily fluids in pancreatic cancer
    Sheng Pan, Teresa A. Brentnall, Ru Chen · 2015 · PROTEOMICS
  96. Mass spectrometry based proteomics as foodomics tool in research and assurance of food quality and safety
    Uroš Andjelković, Djuro Josić · 2018 · Trends in Food Science & Technology
  97. Single-platform ‘multi-omic’ profiling: unified mass spectrometry and computational workflows for integrative proteomics–metabolomics analysis
    Benjamin C. Blum, Fatemeh Mousavi, Andrew Emili · 2018 · Molecular Omics
  98. Recent Advances in Mass Spectrometry-Based Structural Elucidation Techniques
    Xin Ma · 2022 · Molecules
  99. A Tutorial Review of Labeling Methods in Mass Spectrometry-Based Quantitative Proteomics
    Zicong Wang, Peng-Kai Liu, Lingjun Li · 2024 · ACS Measurement Science Au
  100. A fluorescent turn-on detection scheme for α-fetoprotein using quantum dots placed in a boronate-modified molecularly imprinted polymer with high affinity for glycoproteins
    Lei Tan, Kuncai Chen, Cong Xin Huang, Rongfei Peng, Xiaoyan Luo, Rong Yang, Yanfang Cheng, Youwen Tang · 2015 · Microchimica Acta