Transcriptional activation by recruitment

Ptashne, Mark, Gann, Alexander·1997·Nature
DOI 10.1038/386569a0

Cited by (1,000)

Items 501–600 of 1,000

  1. Properties of PC4 and an RNA Polymerase II Complex in Directing Activated and Basal Transcription in Vitro
    Shwu-Yuan Wu, Cheng‐Ming Chiang · 1998 · Journal of Biological Chemistry
  2. A Tetratricopeptide Repeat Mutation in Yeast Transcription Factor IIIC 131 (TFIIIC 131 ) Facilitates Recruitment of Tfiib-Related Factor TFIIIB 70
    Robyn D. Moir, Indra Sethy-Coraci, Karen V. Puglia, Monett D. Librizzi, Ian M. Willis · 1997 · Molecular and Cellular Biology
  3. Transcriptional Coactivator PC4 Stimulates Promoter Escape and Facilitates Transcriptional Synergy by GAL4-VP16
    Aya Fukuda, Tomoyoshi Nakadai, Miho Shimada, Tohru Tsukui, Masahito Matsumoto, Yasuhisa Nogi, Michael Meisterernst, Koji Hisatake · 2004 · Molecular and Cellular Biology
  4. Mutation analysis of the Pip interaction domain reveals critical residues for protein–protein interactions
    Maria Antonia Ortiz, James P. Light, Richard A. Maki, Nuria Assa‐Munt · 1999 · Proceedings of the National Academy of Sciences
  5. An activation-specific role for transcription factor TFIIB in vivo
    Wei-Hua Wu, Michael Hampsey · 1999 · Proceedings of the National Academy of Sciences
  6. Characterization of the MN/CA 9 promoter proximal region: a role for specificity protein (SP) and activator protein 1 (AP1) factors
    Milota Kaluzová, Silvia Pastoreková, Eliška Švastová, Jaromı́r Pastorek, Eric J. Stanbridge, Štefan Kaluz · 2001 · Biochemical Journal
  7. Two roles for integration host factor at an enhancer‐dependent nifA promoter
    Roseli Wassem, Emanuel Maltempi de Souza, Marshall Geoffrey Yates, Fábio de Oliveira Pedrosa, Martin Buck · 2000 · Molecular Microbiology
  8. The Drosophila fl(2)d Gene, Required for Female-Specific Splicing of Sxl and tra Pre-mRNAs, Encodes a Novel Nuclear Protein With a HQ-Rich Domain
    Luiz O. F. Penalva, María Fernanda Ruiz, Angeles Ortega, Begoña Granadino, Luis Vicente, Carmen Segarra, Juan Valcárcel, Lucas Sánchez · 2000 · Genetics
  9. Control of RNA polymerase II activity by dedicated CTD kinases and phosphatases
    Barbara Majello · 2001 · Frontiers in bioscience
  10. Combinatorial Gene Regulation Using Auto-Regulation
    Rutger Hermsen, Bas Ursem, Pieter Rein ten Wolde · 2010 · PLoS Computational Biology
  11. miR‐34c Regulates the Permeability of Blood–Tumor Barrier via MAZ‐Mediated Expression Changes of ZO‐1, Occludin, and Claudin‐5
    Lini Zhao, Ping Wang, Yunhui Liu, Jun Ma, Yixue Xue · 2014 · Journal of Cellular Physiology
  12. A 50 year history of technologies that drove discovery in eukaryotic transcription regulation
    John T. Lis · 2019 · Nature Structural & Molecular Biology
  13. The Co-activator p300 Associates Physically with and Can Mediate the Action of the Distal Enhancer of the FGF-4Gene
    Tamara K. Nowling, Cory T. Bernadt, Lance R. Johnson, Michelle M. Desler, Angie Rizzino · 2003 · Journal of Biological Chemistry
  14. Divergent hTAFII31-binding Motifs Hidden in Activation Domains
    Yongmun Choi, Shinichi Asada, Motonari Uesugi · 2000 · Journal of Biological Chemistry
  15. Interaction with the Epstein-Barr Virus Helicase Targets Zta to DNA Replication Compartments
    Gangling Liao, Frederick Y. Wu, S. Diane Hayward · 2001 · Journal of Virology
  16. Activation of β-Globin Promoter by Erythroid Kruppel-Like Factor
    Haruhiko Asano, George Stamatoyannopoulos · 1998 · Molecular and Cellular Biology
  17. Identification of phylogenetic footprints in primate tumor necrosis factor-α promoters
    Jessica Y. Leung, F. Ellis McKenzie, Adele M. Uglialoro, Pedro O. Flores-Villanueva, Barbara C. Sorkin, Edmond J. Yunis, Daniel L. Hartl, Anne E. Goldfeld · 2000 · Proceedings of the National Academy of Sciences
  18. Activation and Repression Mechanisms in Yeast
    Kevin Struhl, David Kadosh, Marie Keaveney, Laurent Kuras, Zarmik Moqtaderi · 1998 · Cold Spring Harbor Symposia on Quantitative Biology
  19. Pioneer activity distinguishes activating from non‐activating SOX2 binding sites
    Michela Maresca, Teun van den Brand, Hangpeng Li, Hans Teunissen, James O. J. Davies, Elzo de Wit · 2023 · The EMBO Journal
  20. Uncoupling Transcription from Covalent Histone Modification
    Hesheng Zhang, Lu Gao, Jayamani Anandhakumar, David S. Gross · 2014 · PLoS Genetics
  21. On the Mechanism of Constitutive Pdr1 Activator-mediated PDR5 Transcription in Saccharomyces cerevisiae
    Chen Gao, Luming Wang, Elena M. Milgrom, W C Shen · 2004 · Journal of Biological Chemistry
  22. Expression and Localization of the Homeodomain-Containing Protein HEX in Human Thyroid Tumors
    Angela Valentina D'Elia, Gianluca Tell, Diego Russo, Franco Arturi, Fabio Puglisi, Guidalberto Manfioletti, Valter Gattei, David L. Mack, Palmina Cataldi, Sébastiano Filetti et al. · 2002 · The Journal of Clinical Endocrinology & Metabolism
  23. DA-Complex Assembly Activity Required for VP16C Transcriptional Activation
    Naoko Kobayashi, Peter J. Horn, Susan M. Sullivan, Steven J. Triezenberg, Thomas Boyer, Arnold J. Berk · 1998 · Molecular and Cellular Biology
  24. SIR repression of a yeast heat shock gene: UAS and TATA footprints persist within heterochromatin
    Edward A. Sekinger, David S. Gross · 1999 · The EMBO Journal
  25. RNA sequences that work as transcriptional activating regions
    Shamol Saha · 2003 · Nucleic Acids Research
  26. An interplay between TATA box-binding protein and transcription factors IIE and IIA modulates DNA binding and transcription
    Kyoko Yokomori, C. Peter Verrijzer, Robert Tjian · 1998 · Proceedings of the National Academy of Sciences
  27. Artificial Recruitment of TFIID, but Not RNA Polymerase II Holoenzyme, Activates Transcription in Mammalian Cells
    David R. Dorris, Kevin Struhl · 2000 · Molecular and Cellular Biology
  28. A mathematical model for synergistic eukaryotic gene activation 1 1Edited by F. E. Cohen
    Jin Wang, Katharine B. Ellwood, Alison M. Lehman, Michael Carey, Zhen-Su She · 1999 · Journal of Molecular Biology
  29. The 19 S Proteasome Subcomplex Establishes a Specific Protein Interaction Network at the Promoter for Stimulated Transcriptional Initiation in Vivo
    Malik, Shivani, Shukla, Abhijit, Sen, Payel, Bhaumik, Sukesh R. · 2009 · Journal of Biological Chemistry
  30. The Spatial Organization of the VirR Boxes Is Critical for VirR-Mediated Expression of the Perfringolysin O Gene, pfoA , from Clostridium perfringens
    Jackie K. Cheung, Bruno Dupuy, Deanna Deveson Lucas, Julian I. Rood · 2004 · Journal of Bacteriology
  31. Single-Molecule Imaging Reveals Dynamics of CREB Transcription Factor Bound to Its Target Sequence
    Noriyuki Sugo, Masatoshi Morimatsu, Yoshiyuki Arai, Yoshinori Kousoku, Aya Ohkuni, Taishin Nomura, Toshio Yanagida, Nobuhiko Yamamoto · 2015 · Scientific Reports
  32. Involvement of region 4 of the σ 70 subunit of RNA polymerase in transcriptional activation of the lux operon during quorum sensing
    Deborah C. Johnson, Akira Ishihama, Ann M. Stevens · 2003 · FEMS Microbiology Letters
  33. Mode of action of the TyrR protein: repression and activation of the tyrP promoter of Escherichia coli
    Ji Woo Yang, Jung Shan Hwang, H Camakaris, Windy Irawaty, Akira Ishihama, James Pittard · 2004 · Molecular Microbiology
  34. The Second Paradigm for Activation of Transcription
    Sivaramesh Wigneshweraraj, Patricia C. Burrows, Patricia Bordes, J Schumacher, Mathieu Rappas, Robert D. Finn, Wendy V. Cannon, Xiaodong Zhang, Martin Buck · 2005 · Progress in nucleic acid research and molecular biology
  35. Maximal Stimulation of Meiotic Recombination by a Yeast Transcription Factor Requires the Transcription Activation Domain and a DNA-Binding Domain
    David T. Kirkpatrick, Qingqing Fan, Thomas D. Petes · 1999 · Genetics
  36. Isolation and characterization of a novel gene from the DiGeorge chromosomal region that encodes for a mediator subunit.
    L. Berti, Gerhard Mittler, Gerhard K. H. Przemeck, G. Stelzer, Barbara Günzler, F. Amati, E. Conti, B. Dallapiccola, Martin Hrabě de Angelis, G. Novelli et al. · 2001 · Genomics
  37. Expression of two alternative sigma factors of Synechococcus sp. strain PCC 7002 is modulated by carbon and nitrogen stress
    Laurie F. Caslake, Tanja M. Gruber, Donald A. Bryant · 1997 · Microbiology
  38. Unrestraining Genetic Processes with a Protein–DNA Hinge
    Takeshi Tomonaga, Gregory A. Michelotti, Daniel E. Libutti, Angelique Uy, Brian Sauer, David Levens · 1998 · Molecular Cell
  39. Transcriptional regulation: Contending with complexity
    Frank C. P. Holstege, Richard A. Young · 1999 · Proceedings of the National Academy of Sciences
  40. Transcriptional activation by artificial recruitment in mammalian cells
    Julián B. Nevado, Luc R. Gaudreau, Maryse Adam, Mark Ptashne · 1999 · Proceedings of the National Academy of Sciences
  41. Development of programmable small DNA-binding molecules with epigenetic activity for induction of core pluripotency genes.
    G. Pandian, Akimichi Ohtsuki, Toshikazu Bando, Shinsuke Sato, K. Hashiya, H. Sugiyama · 2012 · Bioorganic & Medicinal Chemistry
  42. The mechanism of binding of the KIX domain to the mixed lineage leukemia protein and its allosteric role in the recognition of c‐Myb
    Angelo Toto, Rajanish Giri, Maurizio Brunori, Stefano Gianni · 2014 · Protein Science
  43. Emerging themes in neuronal activity-dependent gene expression
    Ram Madabhushi, Tae-Kyung Kim · 2017 · Molecular and Cellular Neuroscience
  44. Visualization of two architectures in class-II CAP-dependent transcription activation
    Wei Kang Shi, Yanan Jiang, Yibin Deng, Zigang Dong, Bin Liu · 2020 · PLoS Biology
  45. CtrA, a Global Response Regulator, Uses a Distinct Second Category of Weak DNA Binding Sites for Cell Cycle Transcription Control in Caulobacter crescentus
    William Spencer, Rania Siam, Marie-Claude Ouimet, D. Patrick Bastedo, Gregory T. Marczynski · 2009 · Journal of Bacteriology
  46. Interaction between mating-type proteins from the homothallic fungus Sordaria macrospora
    Sabine Jacobsen, Michael Wittig, Stefanie Pöggeler · 2002 · Current Genetics
  47. The C-terminal domain-phosphorylated IIO form of RNA polymerase II is associated with the transcription repressor NC2 (Dr1/DRAP1) and is required for transcription activation in human nuclear extracts
    Enrique Castaño, Petra Groß, Zhengxin Wang, Robert G. Roeder, Thomas Oelgeschläger · 2000 · Proceedings of the National Academy of Sciences
  48. Analysis of TFIIA Function In Vivo: Evidence for a Role in TATA-Binding Protein Recruitment and Gene-Specific Activation
    Qing Liu, Scott E. Gabriel, Kelli L. Roinick, Robert D. Ward, Karen M. Arndt · 1999 · Molecular and Cellular Biology
  49. Conserved interaction of the papillomavirus E2 transcriptional activator proteins with human and yeast TFIIB proteins
    J D Benson, R Lawande, Peter M. Howley · 1997 · Journal of Virology
  50. Impaired Core Promoter Recognition Caused by Novel Yeast TAF145 Mutations Can Be Restored by Creating a Canonical TATA Element within the Promoter Region of the TUB2 Gene
    Yoshihiro Tsukihashi, Tsuyoshi Miyake, Masashi Kawaichi, Tetsuro Kokubo · 2000 · Molecular and Cellular Biology
  51. Activation of Transcription In Vitro by Recruitment of the Yeast RNA Polymerase II Holoenzyme
    Luc R. Gaudreau, Maryse Adam, Mark Ptashne · 1998 · Molecular Cell
  52. Transcription Activation: Unveiling the Essential Nature of TFIID
    Bo-Shiun Chen, Michael Hampsey · 2002 · Current Biology
  53. Enhancer–promoter interference and its prevention in transgenic plants
    Stacy D. Singer, Kerik D. Cox, Zongrang Liu · 2010 · Plant Cell Reports
  54. Evolution of genetic mechanisms regulating cortical neurogenesis
    Alexandre Espinós, Eduardo Fernández Ortuño, Enrico Negri, Vı́ctor Borrell · 2022 · Developmental Neurobiology
  55. Effect of Phosphorylation on the Structure and Fold of Transactivation Domain of p53
    Sanchari Kar, Kazuyasu Sakaguchi, Yasuyuki Shimohigashi, Soma Samaddar, Raja Banerjee, Gautam Basu, V. Swaminathan, Tapas Kumar Kundu, Siddhartha Roy · 2002 · Journal of Biological Chemistry
  56. Two Distinct Domains in Staf To Selectively Activate Small Nuclear RNA-Type and mRNA Promoters
    Catherine Schuster, Alain Krol, Philippe Carbon · 1998 · Molecular and Cellular Biology
  57. A computational genomics approach to the identification of gene networks
    Andreas Wagner · 1997 · Nucleic Acids Research
  58. Region I modifies DNA-binding domain conformation of sigma 54 within the holoenzyme 1 1Edited by R. Ebright
    Paul Casaz, Martin Buck · 1999 · Journal of Molecular Biology
  59. Environmental regulation operating at the promoter clearance step of bacterial transcription
    Rakesh S. Laishram, Jayaraman Gowrishankar · 2007 · Genes & Development
  60. Guiding Biomolecular Interactions in Cells Using de Novo Protein–Protein Interfaces
    Abigail J. Smith, Franziska Thomas, Deborah K. Shoemark, Derek N. Woolfson, Nigel J. Savery · 2019 · ACS Synthetic Biology
  61. Characterization of RNA helicase A as component of STAT6-dependent enhanceosome
    Tuuli Välineva, Jie Yang, Olli Silvennoinen · 2006 · Nucleic Acids Research
  62. Zinc fingers and a green thumb: manipulating gene expression in plants
    David Jay Segal, Justin T. Stege, Carlos F. Barbas · 2003 · Current Opinion in Plant Biology
  63. Both the constitutive Cauliflower Mosaic Virus 35S and tissue-specific AGAMOUS enhancers activate transcription autonomously in Arabidopsis thaliana
    Stacy D. Singer, Kerik D. Cox, Zongrang Liu · 2010 · Plant Molecular Biology
  64. Nuclear Compartments, Genome Folding, and Enhancer-Promoter Communication
    Sergey V. Ulianov, Alexey A. Gavrilov, Sergey V. Razin · 2015 · International review of cytology
  65. Kinetic Proofreading
    Hinrich Boeger · 2022 · Annual Review of Biochemistry
  66. Nanog organizes transcription bodies
    Ksenia Kuznetsova, Noémie M. Chabot, Martino Ugolini, Edlyn Wu, Manan Lalit, Haruka Oda, Yuko Sato, Hiroshi Kimurâ, Florian Jug, Nadine L. Vastenhouw · 2022 · Current Biology
  67. Genetic Evidence for Pre-recruitment as the Mechanism of Transcription Activation by SoxS of Escherichia coli: The Dominance of DNA Binding Mutations of SoxS
    Kevin L. Griffith, Richard E. Wolf · 2004 · Journal of Molecular Biology
  68. Dynamic Chromatin Alterations Triggered by Natural and Synthetic Activation Domains
    Alexander M. Erkine, David S. Gross · 2003 · Journal of Biological Chemistry
  69. The DNA binding protein Tfx from Methanobacterium thermoautotrophicum: structure, DNA binding properties and transcriptional regulation
    Andreas Hochheimer, Reiner Hedderich, Rudolf Kurt Thauer · 1999 · Molecular Microbiology
  70. Nuclear Receptor Location Analyses in Mammalian Genomes: From Gene Regulation to Regulatory Networks
    Geneviève Deblois, Vincent Giguère · 2008 · Molecular Endocrinology
  71. Effects of differentiation on the transcriptional regulation of the FGF-4 gene: Critical roles played by a distal enhancer
    Kimberly A. Lamb, Angie Rizzino · 1998 · Molecular Reproduction and Development
  72. Calling cards for DNA-binding proteins
    Haoyi Wang, Mark Johnston, Robi David Mitra · 2007 · Genome Research
  73. Translating Lung Function Genome-Wide Association Study (GWAS) Findings
    Abdul Kader Kheirallah, Suzanne Miller, Ian P. Hall, Ian Sayers · 2016 · Advances in genetics
  74. Expression of the Mycobacterium tuberculosis acr -Coregulated Genes from the DevR (DosR) Regulon Is Controlled by Multiple Levels of Regulation
    Hema M. Vasudeva-Rao, Kathleen A. McDonough · 2008 · Infection and Immunity
  75. Characteristic bimodal profiles of RNA polymerase II at thousands of active mammalian promoters
    Mathieu Quinodoz, Cédric Gobet, Félix Naef, Kyle Gustafson · 2014 · Genome biology
  76. Identification of the Functional Variant(s) that Explain the Low-Density Lipoprotein Receptor (LDLR) GWAS SNP rs6511720 Association with Lower LDL-C and Risk of CHD
    Roaa Hani Fairoozy, Jon White, Jutta Palmen, Anastasia Z. Kalea, Steve Eric Humphries · 2016 · PLoS ONE
  77. Isolation and identification of a TetR family protein that regulates the biodesulfurization operon
    Pooja Murarka, Tanaya Bagga, Pooja Singh, Sabita Rangra, Preeti Srivastava · 2019 · AMB Express
  78. Transcriptional regulatory proteins in central carbon metabolism of Pichia pastoris and Saccharomyces cerevisiae
    Özge Kalender, P. Çalık · 2020 · Applied Microbiology and Biotechnology
  79. De novo design of a reversible phosphorylation-dependent switch for membrane targeting
    Leon Harrington, Jordan M. Fletcher, Tamara Heermann, Derek N. Woolfson, Petra Schwille · 2021 · Nature Communications
  80. Overexpression of a Novel ERF-X-Type Transcription Factor, OsERF106MZ, Reduces Shoot Growth and Tolerance to Salinity Stress in Rice
    Hung‐Chi Chen, Tzu-Cheng Chien, Tsung-Yang Chen, Ming-Hau Chiang, Ming‐Hsin Lai, Men-Chi Chang · 2021 · Rice
  81. Transcriptional activators and activation mechanisms
    Jun Ma · 2011 · Protein & Cell
  82. Reciprocal Nuclear Shuttling of Two Antagonizing Zn Finger Proteins Modulates Tup Family Corepressor Function To Repress Chromatin Remodeling
    Kouji Hirota, Charles S. Hoffman, Kunihiro Ohta · 2006 · Eukaryotic Cell
  83. Signaling activation and repression of RNA polymerase II transcription in yeast
    Richard J. Reece, Adam Platt · 1997 · BioEssays
  84. Periodic Epi-organization of the Yeast Genome Revealed by the Distribution of Promoter Sites
    François Képès · 2003 · Journal of Molecular Biology
  85. An initiation element in the yeast CUP1 promoter is recognized by RNA polymerase II in the absence of TATA box-binding protein if the DNA is negatively supercoiled
    Benoit P. Leblanc, Craig J. Benham, David J. Clark · 2000 · Proceedings of the National Academy of Sciences
  86. Optimized Regulation of Gene Expression Using Artificial Transcription Factors
    Reza Yaghmai, Garry R. Cutting · 2002 · Molecular Therapy
  87. Regulation of Cytochrome P450 Gene Transcription by Phenobarbital
    BYRON W. KEMPER · 1998 · Progress in nucleic acid research and molecular biology
  88. Programmable genetic switches to control transcriptional machinery of pluripotency
    Ganesh N. Pandian, Hiroshi Sugiyama · 2012 · Biotechnology Journal
  89. Promoter Structure and Transcriptional Activation with Chromatin Templates Assembled In Vitro
    Michael J. Pazin, Jason W. Hermann, James T. Kadonaga · 1998 · Journal of Biological Chemistry
  90. Next Generation Genome Sequencing
    Michael Janitz · 2008 · Wiley eBooks
  91. The mRNA cap-binding complex stimulates the formation of pre-initiation complex at the promoter via its interaction with Mot1p in vivo
    Shweta Lahudkar, Abhijit Shukla, Pratibha Bajwa, Geetha Durairaj, Nadia Stanojevic, Sukesh R. Bhaumik · 2010 · Nucleic Acids Research
  92. Getting into chromatin: how do transcription factors get past the histones?
    Randall H. Morse · 2003 · Biochemistry and Cell Biology
  93. Mechanistic Studies on the Impact of Transcription on Sequence-specific Termination of DNA Replication and Vice Versa
    Bidyut K. Mohanty, Trilochan Sahoo, Deepak Bastia · 1998 · Journal of Biological Chemistry
  94. The orientation of the AP-1 heterodimer on DNA strongly affects transcriptional potency
    Milan Chytil, Blake R. Peterson, Daniel A. Erlanson, Gregory L. Verdine · 1998 · Proceedings of the National Academy of Sciences
  95. Genomic position analyses and the transcription machinery 1 1Edited by M. Yahiv
    Ernesto Pérez‐Rueda, Jay D. Gralla, Julio Collado‐Vides · 1998 · Journal of Molecular Biology
  96. Genomic dissection of enhancers uncovers principles of combinatorial regulation and cell type-specific wiring of enhancer–promoter contacts
    Verena Thormann, Maika Rothkegel, Robert Schöpflin, Laura V. Glaser, Petar M. Djurić, Na Li, Ho‐Ryun Chung, Kevin Schwahn, Martin Vingron, Sebastiaan H. Meijsing · 2018 · Nucleic Acids Research
  97. TFIIB and subunits of the SAGA complex are involved in transcriptional activation of phospholipid biosynthetic genes by the regulatory protein Ino2 in the yeastSaccharomyces cerevisiae
    Martin Dietz, Willm‐Thomas Heyken, Jens Hoppen, Susanne Geburtig, Hans‐Joachim Schüller · 2003 · Molecular Microbiology
  98. Glutamate at the phosphorylation site of response regulator CtrA provides essential activities without increasing DNA binding
    Rania Siam · 2003 · Nucleic Acids Research
  99. Biological Signal Processing with a Genetic Toggle Switch
    Patrick Hillenbrand, Georg Fritz, Ulrich Gerland · 2013 · PLoS ONE
  100. Analysis of Gal4-directed transcription activation using Tra1 mutants selectively defective for interaction with Gal4
    Ling Lin, Lynn Chamberlain, Lihua Julie Zhu, Michael R. Green · 2012 · Proceedings of the National Academy of Sciences