Transcriptional activation by recruitment
Abstract
The recruitment model for gene activation stipulates that an activator works by bringing the transcriptional machinery to the DNA. Recent experiments in bacteria and yeast indicate that many genes can be activated by this mechanism. These findings have implications for our understanding of the nature of activating regions and their targets, and for the role of histones in gene regulation.
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Expression levels of all human genes can be used to model the presence of cofactor proteins that can recruit TFs for binding.
“Expression levels of all human genes were provided using RNA-seq data from ENCODE. This can be used to model the presence of cofactor proteins that can recruit TFs for binding (Ptashne and Gann, 1997).”
From WILDS: A Benchmark of in-the-Wild Distribution Shifts (2020) · cites this paper as Ptashne and Gann, 1997
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- Authors
- Ptashne, M., & Gann, A.
- Affiliations
- Harvard University (US)
- Lancaster University (GB)
- Venue
- Nature
- Published
- 1997-04
- Volume
- 386
- Issue
- 6625
- Pages
- 569-577
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- OpenAlex
- W2087950896
- Cited by
- 1,158
- References
- 103
- Citations by year
- 2026: 5 · 2025: 20 · 2024: 29 · 2023: 13 · 2022: 22 · 2021: 32 · 2020: 20 · 2019: 22 · 2018: 21 · 2017: 15 · 2016: 34 · 2015: 18 · 2014: 35 · 2013: 27 · 2012: 43
- FWCI
- 8.60
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory) (submittedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gene Regulatory Network Analysis
- Keywords
- transcriptional activation, recruitment model, activators, transcription machinery, histones, gene expression regulation, bacterial transcription
- MeSH terms
- Transcriptional Activation, Gene Expression Regulation, Bacterial, Gene Expression Regulation, Fungal
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