The p97/VCP ATPase is critical in muscle atrophy and the accelerated degradation of muscle proteins
Open accessAbstract
The p97/VCP ATPase complex facilitates the extraction and degradation of ubiquitinated proteins from larger structures. We therefore studied if p97 participates to the rapid degradation of myofibrillar proteins during muscle atrophy. Electroporation of a dominant negative p97 (DNp97), but not the WT, into mouse muscle reduced fibre atrophy caused by denervation and food deprivation. DNp97 (acting as a substrate-trap) became associated with specific myofibrillar proteins and its cofactors, Ufd1 and p47, and caused accumulation of ubiquitinated components of thin and thick filaments, which suggests a role for p97 in extracting ubiquitinated proteins from myofibrils. DNp97 expression in myotubes reduced overall proteolysis by proteasomes and lysosomes and blocked the accelerated proteolysis induced by FoxO3, which is essential for atrophy. Expression of p97, Ufd1 and p47 increases following denervation, at times when myofibrils are rapidly degraded. Surprisingly, p97 inhibition, though toxic to most cells, caused rapid growth of myotubes (without enhancing protein synthesis) and hypertrophy of adult muscles. Thus, p97 restrains post-natal muscle growth, and during atrophy, is essential for the accelerated degradation of most muscle proteins.
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The p97/VCP ATPase complex extracts and degrades ubiquitinated proteins from larger structures including myofibrils, is induced during denervation, and overexpression of a dominant-negative p97/VCP reduces overall proteolysis by the proteasome and lysosome pathways.
“Finally, another player is the p97/valosin-containing protein (VCP) ATPase complex whose function is to extract and degrade ubiquitinated proteins from larger structures, including myofibrils60. p97/VCP is induced during denervation, and overexpression of a dominant-negative p97/VCP reduces overall proteolysis by the proteasome and lysosome pathways.”
From Mechanisms of muscle atrophy and hypertrophy: implications in health and disease (2021) · cites this paper as [60]
In skeletal muscle, p97/VCP is critical in extracting ubiquitinated proteins from myofibrils during fasting- and denervation-induced atrophy.
“In skeletal muscle, p97/VCP is critical in extracting ubiquitinated proteins from myofibrils during fasting- and denervation-induced atrophy.”
From The connection between the dynamic remodeling of the mitochondrial network and the regulation of muscle mass (2021) · cites this paper as [177]
During muscle atrophy, induction of p97/VCP occurs when protein breakdown is maximal in myofibers.
“Interestingly, during muscle atrophy, induction of p97/VCP occurs when protein breakdown is maximal in myofibers [177].”
From The connection between the dynamic remodeling of the mitochondrial network and the regulation of muscle mass (2021) · cites this paper as [177]
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Identification of ubiquitin ligases required for skeletal muscle atrophy.
Bodine, S. C., Latres, E., Baumhueter, S., Lai, V. K.-M., Nunez, L., Clarke, B. A., Poueymirou, W. T., Panaro, F. J., Na, E., Dharmarajan, K., et al. (2001) · Science · doi:10.1126/science.1065874 · Cited by 3,521 · see citing works
Sandri, M., Sandri, C., Gilbert, A., Skurk, C., Calabria, E., Picard, A., Walsh, K., Schiaffino, S., Lecker, S. H., & Goldberg, A. L. (2004) · Cell · doi:10.1016/s0092-8674(04)00400-3 · Cited by 3,012 · see citing works
Self-citationStitt, T. N., Drujan, D., Clarke, B. A., Panaro, F., Timofeyva, Y., Kline, W. O., Gonzalez, M., Yancopoulos, G. D., & Glass, D. J. (2004) · Molecular Cell · doi:10.1016/s1097-2765(04)00211-4 · Cited by 1,964 · see citing works
FoxO3 Controls Autophagy in Skeletal Muscle In Vivo
Mammucari, C., Milan, G., Romanello, V., Masiero, E., Rudolf, R., Del Piccolo, P., Burden, S. J., Di Lisi, R., Sandri, C., Zhao, J., et al. (2007) · Cell Metabolism · doi:10.1016/j.cmet.2007.11.001 · Cited by 1,953 · see citing works
Self-citationMultiple types of skeletal muscle atrophy involve a common program of changes in gene expression
Lecker, S. H., Jagoe, R. T., Gilbert, A., Gomes, M., Baracos, V., Bailey, J., Price, S. R., Mitch, W. E., & Goldberg, A. L. (2004) · The FASEB Journal · doi:10.1096/fj.03-0610com · Cited by 1,539 · see citing works
Self-citationZhao, J., Brault, J. J., Schild, A., Cao, P., Sandri, M., Schiaffino, S., Lecker, S. H., & Goldberg, A. L. (2007) · Cell Metabolism · doi:10.1016/j.cmet.2007.11.004 · Cited by 1,489 · see citing works
Self-citationWasting as independent risk factor for mortality in chronic heart failure
Anker, S. D., Ponikowski, P. P., Varney, S. J., Chua, T. P., Clark, A. L., Webb-Peploe, K., Harrington, D., Kox, W. J., Poole-Wilson, P. A., & Coats, A. J. S. (1997) · The Lancet · doi:10.1016/s0140-6736(96)07015-8 · Cited by 1,399 · see citing works
Watts, G. D. J., Wymer, J., Kovach, M. J., Mehta, S. G., Mumm, S., Darvish, D., Pestronk, A., Whyte, M. P., & Kimonis, V. E. (2004) · Nature Genetics · doi:10.1038/ng1332 · Cited by 1,391 · see citing works
Exome Sequencing Reveals VCP Mutations as a Cause of Familial ALS
Johnson, J. O., Mandrioli, J., Benatar, M., Abramzon, Y., Van Deerlin, V. M., Trojanowski, J. Q., Gibbs, J. R., Brunetti, M., Gronka, S., Wuu, J., et al. (2010) · Neuron · doi:10.1016/j.neuron.2010.11.036 · Cited by 1,235 · see citing works
Mechanisms of Muscle Wasting — The Role of the Ubiquitin–Proteasome Pathway
Mitch, W. E., & Goldberg, A. L. (1996) · New England Journal of Medicine · doi:10.1056/nejm199612193352507 · Cited by 1,163 · see citing works
Self-citationThe AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol
Ye, Y., Meyer, H. H., & Rapoport, T. A. (2001) · Nature · doi:10.1038/414652a · Cited by 1,099 · see citing works
Reversal of Cancer Cachexia and Muscle Wasting by ActRIIB Antagonism Leads to Prolonged Survival
Zhou, X., Wang, J. L., Lu, J., Song, Y., Kwak, K. S., Jiao, Q., Rosenfeld, R., Chen, Q., Boone, T. C., Simonet, W. S., et al. (2010) · Cell · doi:10.1016/j.cell.2010.07.011 · Cited by 941 · see citing works
Self-citationSacheck, J. M., Ohtsuka, A., McLary, S. C., & Goldberg, A. L. (2004) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00073.2004 · Cited by 606 · see citing works
Self-citationFunction of the p97–Ufd1–Npl4 complex in retrotranslocation from the ER to the cytosol
Ye, Y., Meyer, H. H., & Rapoport, T. A. (2003) · The Journal of Cell Biology · doi:10.1083/jcb.200302169 · Cited by 598 · see citing works
Sacheck, J. M., Hyatt, J. K., Raffaello, A., Thomas Jagoe, R., Roy, R. R., Reggie Edgerton, V., Lecker, S. H., & Goldberg, A. L. (2007) · The FASEB Journal · doi:10.1096/fj.06-6604com · Cited by 585 · see citing works
Self-citationCohen, S., Brault, J. J., Gygi, S. P., Glass, D. J., Valenzuela, D. M., Gartner, C. A., Latres, E., & Goldberg, A. L. (2009) · The Journal of Cell Biology · doi:10.1083/jcb.200901052 · Cited by 584 · see citing works
Self-citationRichly, H., Rapé, M., Braun, S. J., Rumpf, S., Hoege, C., & Jentsch, S. (2005) · Cell · doi:10.1016/j.cell.2004.11.013 · Cited by 523 · see citing works
Valosin-containing protein (VCP) is required for autophagy and is disrupted in VCP disease
Ju, J.-S., Fuentealba, R. A., Miller, S. E., Jackson, E., Piwnica-Worms, D., Baloh, R. H., & Weihl, C. C. (2009) · Journal of Cell Biology · doi:10.1083/jcb.200908115 · Cited by 494 · see citing works
Meyer, H. H., Shorter, J., Seemann, J., Pappin, D., & Warren, G. (2000) · The EMBO Journal · doi:10.1093/emboj/19.10.2181 · Cited by 446 · see citing works
Rapé, M., Hoppe, T., Gorr, I. H., Kalocay, M., Richly, H., & Jentsch, S. (2001) · Cell · doi:10.1016/s0092-8674(01)00595-5 · Cited by 438 · see citing works
Dai, R. M., & Li, C.-C. H. (2001) · Nature Cell Biology · doi:10.1038/35087056 · Cited by 437 · see citing works
Tresse, E., Salomons, F. A., Vesa, J., Bott, L. C., Kimonis, V., Yao, T.-P., Dantuma, N. P., & Taylor, J. P. (2010) · Autophagy · doi:10.4161/auto.6.2.11014 · Cited by 437 · see citing works
Solomon, V., & Goldberg, A. L. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.43.26690 · Cited by 432 · see citing works
Self-citationMoir, D., Stewart, S. E., Osmond, B. C., & Botstein, D. (1982) · Genetics · doi:10.1093/genetics/100.4.547 · Cited by 373 · see citing works
Signaling pathways perturbing muscle mass.
Glass, D. J. (2010) · Current Opinion in Clinical Nutrition and Metabolic Care · doi:10.1097/mco.0b013e32833862df · Cited by 359 · see citing works
Patterns of gene expression in atrophying skeletal muscles: response to food deprivation
Jagoe, R. T., Lecker, S. H., Gomes, M., & Goldberg, A. L. (2002) · The FASEB Journal · doi:10.1096/fj.02-0312com · Cited by 344 · see citing works
Self-citationChou, T., Brown, S. J., Minond, D., Nordin, B. E., Li, K., Jones, A. C., Chase, P. S., Porubsky, P. R., Stoltz, B. M., Schoenen, F. J., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1015312108 · Cited by 323 · see citing works
Inhibitors of the proteasome reduce the accelerated proteolysis in atrophying rat skeletal muscles.
Tawa, N. E., Odessey, R., & Goldberg, A. L. (1997) · Journal of Clinical Investigation · doi:10.1172/jci119513 · Cited by 322 · see citing works
Self-citationDai, R., Chen, E., Longo, D. L., Gorbea, C. M., & Li, C.-C. H. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.6.3562 · Cited by 315 · see citing works
UBXD7 Binds Multiple Ubiquitin Ligases and Implicates p97 in HIF1α Turnover
Alexandru, G., Graumann, J., Smith, G. T., Kolawa, N. J., Fang, R., & Deshaies, R. J. (2008) · Cell · doi:10.1016/j.cell.2008.06.048 · Cited by 305 · see citing works
Downstream of Akt: FoxO3 and mTOR in the regulation of autophagy in skeletal muscle
Mammucari, C., Schiaffino, S., & Sandri, M. (2008) · Autophagy · doi:10.4161/auto.5905 · Cited by 295 · see citing works
Medina, R., Wing, S. S., & Goldberg, A. L. (1995) · Biochemical Journal · doi:10.1042/bj3070631 · Cited by 294 · see citing works
Self-citationRad23 Promotes the Targeting of Proteolytic Substrates to the Proteasome
Chen, L., & Madura, K. (2002) · Molecular and Cellular Biology · doi:10.1128/mcb.22.13.4902-4913.2002 · Cited by 291 · see citing works
Peters, J. M., Walsh, M. J., & Franke, W. W. (1990) · The EMBO Journal · doi:10.1002/j.1460-2075.1990.tb08300.x · Cited by 282 · see citing works
Cdc48 (p97): a ‘molecular gearbox’ in the ubiquitin pathway?
Jentsch, S., & Rumpf, S. (2006) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2006.11.005 · Cited by 280 · see citing works
Cdc48/p97 promotes reformation of the nucleus by extracting the kinase Aurora B from chromatin
Ramadan, K., Bruderer, R., Spiga, F. M., Popp, O., Baur, T., Gotta, M., & Meyer, H. H. (2007) · Nature · doi:10.1038/nature06388 · Cited by 261 · see citing works
Wójcik, C., Yano, M., & Demartino, G. (2003) · Journal of Cell Science · doi:10.1242/jcs.00841 · Cited by 251 · see citing works
The AAA-ATPase p97 is essential for outer mitochondrial membrane protein turnover
Xu, S., Peng, G., Wang, Y., Fang, S., & Karbowski, M. (2011) · Molecular Biology of the Cell · doi:10.1091/mbc.e10-09-0748 · Cited by 243 · see citing works
Kimonis, V. E., Fulchiero, E. C., Vesa, J., & Watts, G. (2008) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2008.09.003 · Cited by 227 · see citing works
Altun, M., Besche, H. C., Overkleeft, H. S., Piccirillo, R., Edelmann, M. J., Kessler, B. M., Goldberg, A. L., & Ulfhake, B. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.129718 · Cited by 226 · see citing works
Self-citationDiverse functions with a common regulator: Ubiquitin takes command of an AAA ATPase
Ye, Y. (2006) · Journal of Structural Biology · doi:10.1016/j.jsb.2006.01.005 · Cited by 213 · see citing works
Zhong, X., Shen, Y., Ballar, P., Apostolou, A., Agami, R., & Fang, S. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m409034200 · Cited by 209 · see citing works
Kudryashova, E., Kudryashov, D. S., Kramerova, I. A., & Spencer, M. J. (2005) · Journal of Molecular Biology · doi:10.1016/j.jmb.2005.09.068 · Cited by 207 · see citing works
Smith, D. M., Fraga, H., Reis, C. R. S., Kafri, G., & Goldberg, A. (2011) · Cell · doi:10.1016/j.cell.2011.02.005 · Cited by 202 · see citing works
Self-citationWeihl, C. C., Dalal, S. R., Pestronk, A., & Hanson, P. I. (2005) · Human Molecular Genetics · doi:10.1093/hmg/ddi426 · Cited by 195 · see citing works
Recent advances in p97/VCP/Cdc48 cellular functions
Yamanaka, K., Sasagawa, Y., & Ogura, T. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2011.07.001 · Cited by 191 · see citing works
Wójcik, C., Rowicka, M., Kudlicki, A. S., Nowis, D., McConnell, E. J., Kujawa, M., & Demartino, G. (2006) · Molecular Biology of the Cell · doi:10.1091/mbc.e06-05-0432 · Cited by 189 · see citing works
Medicherla, B., & Goldberg, A. L. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200803022 · Cited by 175 · see citing works
Self-citationPathological consequences of VCP mutations on human striated muscle
Hubbers, C. U., Clemen, C. S., Kesper, K., Boddrich, A., Hofmann, A., Kamarainen, O., Tolksdorf, K., Stumpf, M., Reichelt, J., Roth, U., et al. (2007) · Brain · doi:10.1093/brain/awl238 · Cited by 170 · see citing works
Coordinate activation of autophagy and the proteasome pathway by FoxO transcription factor
Zhao, J., Brault, J. J., Schild, A., & Goldberg, A. L. (2008) · Autophagy · doi:10.4161/auto.5633 · Cited by 164 · see citing works
Self-citationKobayashi, T., Tanaka, K., Inoue, K., & Kakizuka, A. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m207783200 · Cited by 148 · see citing works
The ubiquitin-selective chaperone CDC-48/p97 links myosin assembly to human myopathy
Janiesch, P. C., Kim, J., Mouysset, J., Barikbin, R., Lochmüller, H., Cassata, G., Krause, S., & Hoppe, T. (2007) · Nature Cell Biology · doi:10.1038/ncb1554 · Cited by 143 · see citing works
Cdc48/p97 and Shp1/p47 regulate autophagosome biogenesis in concert with ubiquitin-like Atg8
Krick, R., Bremer, S., Welter, E., Schlotterhose, P., Mühe, Y., Eskelinen, E., & Thumm, M. (2010) · The Journal of Cell Biology · doi:10.1083/jcb.201002075 · Cited by 139 · see citing works
Wang, Q., Song, C., & Li, C.-C. H. (2003) · Biochemical and Biophysical Research Communications · doi:10.1016/s0006-291x(02)02840-1 · Cited by 137 · see citing works
Targeted deletion of p97 (VCP/CDC48) in mouse results in early embryonic lethality
Müller, J. M. M., Deinhardt, K., Rosewell, I., Warren, G., & Shima, D. T. (2007) · Biochemical and Biophysical Research Communications · doi:10.1016/j.bbrc.2006.12.206 · Cited by 133 · see citing works
Zak, R., Martı́n, A., Prior, G., & Rabinowitz, M. (1977) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(17)40409-1 · Cited by 129 · see citing works
Recent advances in the biology and therapy of muscle wasting
Glass, D. J., & Roubenoff, R. (2010) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2010.05809.x · Cited by 127 · see citing works
A Conserved Unfoldase Activity for the p97 AAA-ATPase in Proteasomal Degradation
Beskow, A., Grimberg, K. B., Bott, L. C., Salomons, F. A., Dantuma, N. P., & Young, P. (2009) · Journal of Molecular Biology · doi:10.1016/j.jmb.2009.09.050 · Cited by 115 · see citing works
Song, E. J., Yim, S.-H., Kim, E., Kim, N.-S., & Lee, K. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.6.2511-2524.2005 · Cited by 115 · see citing works
Tsujimoto, Y., Tomita, Y., Hoshida, Y., Kono, T., Oka, T., Yamamoto, S., Nonomura, N., Okuyama, Ä., & Aozasa, K. (2004) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-03-0191 · Cited by 114 · see citing works
Halawani, D., LeBlanc, A. C., Rouiller, I., Michnick, S. W., Servant, M. J., & Latterich, M. (2009) · Molecular and Cellular Biology · doi:10.1128/mcb.00252-09 · Cited by 111 · see citing works
Imbalances in p97 co‐factor interactions in human proteinopathy
Fernández‐Sáiz, V., & Buchberger, A. (2010) · EMBO Reports · doi:10.1038/embor.2010.49 · Cited by 108 · see citing works
SVIP is a novel VCP/p97-interacting protein whose expression causes cell vacuolation
Nagahama, M., Suzuki, M., Hamada, Y., Hatsuzawa, K., Tani, K., Yamamoto, A., & Tagaya, M. (2003) · Molecular Biology of the Cell · doi:10.1091/mbc.02-07-0115 · Cited by 95 · see citing works
Unc45b Forms a Cytosolic Complex with Hsp90 and Targets the Unfolded Myosin Motor Domain
Srikakulam, R., Liu, L., & Winkelmann, D. A. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002137 · Cited by 89 · see citing works
Manno, A., Noguchi, M., Fukushi, J., Motohashi, Y., & Kakizuka, A. (2010) · Genes to Cells · doi:10.1111/j.1365-2443.2010.01428.x · Cited by 88 · see citing works
Kothe, M., Ye, Y., Wagner, J. S., Luca, H. E. D., Kern, E., Rapoport, T. A., & Lencer, W. I. (2005) · Journal of Biological Chemistry · doi:10.1074/jbc.m503138200 · Cited by 86 · see citing works
Ishigaki, S., Hishikawa, N., Niwa, J.-I., Iemura, S.-I., Natsume, T., Hori, S., Kakizuka, A., Tanaka, K., & Sobue, G. (2004) · Journal of Biological Chemistry · doi:10.1074/jbc.m406683200 · Cited by 76 · see citing works
New ATPase regulators—p97 goes to the PUB
Madsen, L., Seeger, M., Semple, C. A. M., & Hartmann‐Petersen, R. (2009) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2009.05.017 · Cited by 72 · see citing works
Yamamoto, S., Tomita, Y., Hoshida, Y., Iizuka, N., Kidogami, S., Miyata, H., Takiguchi, S., Fujiwara, Y., Yasuda, T., Yano, M., et al. (2004) · Clinical Cancer Research · doi:10.1158/1078-0432.ccr-0723-03 · Cited by 71 · see citing works
The reversible depolymerization of actin by potassium iodide
Szent‐Györgyi, A. G. (1951) · Archives of Biochemistry and Biophysics · doi:10.1016/0003-9861(51)90188-9 · Cited by 65 · see citing works
Protein quality control gets muscle into shape
Kim, J., Löwe, T., & Hoppe, T. (2008) · Trends in Cell Biology · doi:10.1016/j.tcb.2008.03.007 · Cited by 65 · see citing works
2-Anilino-4-aryl-1,3-thiazole inhibitors of valosin-containing protein (VCP or p97)
Bursavich, M. G., Parker, D. P., Willardsen, J. A., Gao, Z., Davis, T., Ostanin, K., Robinson, R., Peterson, A., Cimbora, D. M., Zhu, J.-F., et al. (2010) · Bioorganic & Medicinal Chemistry Letters · doi:10.1016/j.bmcl.2010.01.058 · Cited by 62 · see citing works
Guinto, J. B., Ritson, G. P., Taylor, J. P., & Forman, M. S. (2007) · Acta Neuropathologica · doi:10.1007/s00401-007-0224-7 · Cited by 59 · see citing works
An investigation of the cause of death from cancer
Houten, L., & Reilley, A. A. (1980) · Journal of Surgical Oncology · doi:10.1002/jso.2930130205 · Cited by 41 · see citing works
Nishikori, S., Yamanaka, K., Sakurai, T., Esaki, M., & Ogura, T. (2008) · Genes to Cells · doi:10.1111/j.1365-2443.2008.01214.x · Cited by 34 · see citing works
White, M. E., Allen, C. E., & Dayton, W. R. (1988) · Journal of Animal Science · doi:10.2527/jas1988.66134x · Cited by 25 · see citing works
Liver Cytochrome P450 3A Endoplasmic Reticulum-associated Degradation
Acharya, P., Liao, M., Engel, J. C., & Correia, M. A. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.186981 · Cited by 22 · see citing works
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Schiaffino, S., Dyar, K. A., Ciciliot, S., Blaauw, B., & Sandri, M. (2013) · The FEBS Journal · doi:10.1111/febs.12253 · Cited by 1,492 · see citing works
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Cohen, S., Nathan, J. A., & Goldberg, A. L. (2015) · Nature Reviews Drug Discovery · doi:10.1038/nrd4467 · Cited by 1,089 · see citing works
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Sandri, M. (2013) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2013.04.023 · Cited by 689 · see citing works
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Self-citationBasso, M., Pozzi, S., Tortarolo, M., Fiordaliso, F., Bisighini, C., Pasetto, L., Spaltro, G., Lidonnici, D., Gensano, F., Battaglia, E., et al. (2013) · Journal of Biological Chemistry · doi:10.1074/jbc.m112.425066 · Cited by 274 · see citing works
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Blaauw, B., Schiaffino, S., & Reggiani, C. (2013) · Comprehensive physiology · doi:10.1002/cphy.c130009 · Cited by 278 · see citing works
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Haberecht-Müller, S., Krüger, E., & Fielitz, J. (2021) · Biomolecules · doi:10.3390/biom11091327 · Cited by 108 · see citing works
Trim32 reduces PI3K–Akt–FoxO signaling in muscle atrophy by promoting plakoglobin–PI3K dissociation
Cohen, S., Lee, D., Zhai, B., Gygi, S. P., & Goldberg, A. L. (2014) · Journal of Cell Biology · doi:10.1083/jcb.201304167 · Cited by 103 · see citing works
Self-citationRai, M., Coleman, Z., Curley, M., Nityanandam, A., Platt, A., Robles‐Murguia, M., Jiao, J., Finkelstein, D., Wang, Y., Xu, B., et al. (2021) · Cell Metabolism · doi:10.1016/j.cmet.2021.03.005 · Cited by 96 · see citing works
Johnson, A. E., Shu, H., Hauswirth, A. G., Tong, A., & Davis, G. W. (2015) · eLife · doi:10.7554/elife.07366 · Cited by 83 · see citing works
Control of proteasomal proteolysis by mTOR
Zhao, J., Garcia, G. A., & Goldberg, A. L. (2016) · Nature · doi:10.1038/nature16472 · Cited by 79 · see citing works
Self-citationInhibitors of the ATPase p97/VCP: From basic research to clinical applications
Kilgas, S., & Ramadan, K. (2023) · Cell chemical biology · doi:10.1016/j.chembiol.2022.12.007 · Cited by 78 · see citing works
MYTHO is a novel regulator of skeletal muscle autophagy and integrity
Leduc‐Gaudet, J., Franco‐Romero, A., Cefis, M., Moamer, A., Broering, F. E., Milan, G., Sartori, R., Chaffer, T. J., Dulac, M., Marcangeli, V., et al. (2023) · Nature Communications · doi:10.1038/s41467-023-36817-1 · Cited by 73 · see citing works
VCP maintains lysosomal homeostasis and TFEB activity in differentiated skeletal muscle
Arhzaouy, K., Papadopoulos, C., Schulze, N., Pittman, S., Meyer, H., & Weihl, C. (2019) · Autophagy · doi:10.1080/15548627.2019.1569933 · Cited by 67 · see citing works
Re Cecconi, A. D., Forti, M., Chiappa, M., Zhu, Z., Zingman, L. V., Cervo, L., Beltrame, L., Marchini, S., & Piccirillo, R. (2019) · Cancers · doi:10.3390/cancers11101541 · Cited by 66 · see citing works
Cellular and molecular features of neurogenic skeletal muscle atrophy
Ehmsen, J. T., & Höke, A. (2020) · Experimental Neurology · doi:10.1016/j.expneurol.2020.113379 · Cited by 63 · see citing works
Identification of the MuRF1 Skeletal Muscle Ubiquitylome Through Quantitative Proteomics
Baehr, L. M., Hughes, D. C., Lynch, S. A., Haver, D. V., Maia, T. M., Marshall, A. G., Radoshevich, L., Impens, F., Waddell, D. S., & Bodine, S. C. (2021) · Function · doi:10.1093/function/zqab029 · Cited by 62 · see citing works
Volodin, A., Kosti, I., Goldberg, A. L., & Cohen, S. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1612988114 · Cited by 62 · see citing works
Self-citationZFAND5/ZNF216 is an activator of the 26S proteasome that stimulates overall protein degradation
Lee, D., Takayama, S., & Goldberg, A. L. (2018) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1809934115 · Cited by 58 · see citing works
Self-citationSureda-Gómez, M., Martín-Durán, J. M., & Adell, T. (2016) · Development · doi:10.1242/dev.135152 · Cited by 57 · see citing works
Wiederstein, J. L., Nolte, H., Günther, S., Piller, T., Baraldo, M., Kostin, S., Bloch, W., Schindler, N., Sandri, M., Blaauw, B., et al. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.03.136 · Cited by 52 · see citing works
Lee, J. H., Jeon, J. H., & Lee, M. J. (2020) · Nutrients · doi:10.3390/nu12092597 · Cited by 56 · see citing works
Selective Autophagy by Close Encounters of the Ubiquitin Kind
Vainshtein, A., & Grumati, P. (2020) · Cells · doi:10.3390/cells9112349 · Cited by 54 · see citing works
TRAF6 Inhibition Rescues Dexamethasone-Induced Muscle Atrophy
Sun, H., Gong, Y., Qiu, J., Chen, Y., Ding, F., & Zhao, Q. (2014) · International Journal of Molecular Sciences · doi:10.3390/ijms150611126 · Cited by 52 · see citing works
Create and preserve: Proteostasis in development and aging is governed by Cdc48/p97/VCP
Franz, A., Ackermann, L., & Hoppe, T. (2013) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2013.03.031 · Cited by 49 · see citing works
Xue, L., Blythe, E. E., Freiberger, E. C., Mamrosh, J. L., Hebert, A. S., Reitsma, J. M., Hess, S. Y., Coon, J. J., & Deshaies, R. J. (2016) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m116.061036 · Cited by 50 · see citing works
Histone Deacetylase 6 Is a FoxO Transcription Factor-dependent Effector in Skeletal Muscle Atrophy
Ratti, F., Ramond, F., Moncollin, V., Simonet, T., Milan, G., Méjat, A., Thomas, J.-L., Streichenberger, N., Gilquin, B., Matthias, P., et al. (2014) · Journal of Biological Chemistry · doi:10.1074/jbc.m114.600916 · Cited by 47 · see citing works
Dual roles of mTORC1-dependent activation of the ubiquitin-proteasome system in muscle proteostasis
Kaiser, M. S., Milan, G., Ham, D. J., Lin, S., Oliveri, F., Chojnowska, K., Tintignac, L. A. J., Mittal, N., Zimmerli, C. E., Glass, D. J., et al. (2022) · Communications Biology · doi:10.1038/s42003-022-04097-y · Cited by 46 · see citing works
Role of calpains in promoting desmin filaments depolymerization and muscle atrophy
Cohen, S. (2020) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2020.118788 · Cited by 44 · see citing works
Nutraceuticals and Exercise against Muscle Wasting during Cancer Cachexia
Aquila, G., Cecconi, A. D. R., Brault, J., Corli, O., & Piccirillo, R. (2020) · Cells · doi:10.3390/cells9122536 · Cited by 41 · see citing works
Self-citationZhao, F., Yu, Y., Liu, W., Zhang, J., Liu, X., Liu, L., & Yin, H. (2018) · Journal of Agricultural and Food Chemistry · doi:10.1021/acs.jafc.7b05387 · Cited by 41 · see citing works
Erzurumlu, Y., Köse, F. A., Gözen, O., Gözüaçık, D., Toth, E. A., & Ballar, P. (2013) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2013.01.006 · Cited by 41 · see citing works
Hughes, D. C., Goodman, C. A., Baehr, L. M., Gregorevic, P., & Bodine, S. C. (2023) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00457.2023 · Cited by 42 · see citing works
Mechanisms Modulating Skeletal Muscle Phenotype
Blaauw, B., Schiaffino, S., & Reggiani, C. (2013) · Comprehensive physiology · doi:10.1002/j.2040-4603.2013.tb00534.x · Cited by 38 · see citing works
Activation of the SDF1/CXCR4 pathway retards muscle atrophy during cancer cachexia
Martinelli, G. B., Olivari, D., Cecconi, A. D. R., Talamini, L., Ottoboni, L., Lecker, S. H., Stretch, C., Baracos, V. E., Bathe, O. F., Resovi, A., et al. (2016) · Oncogene · doi:10.1038/onc.2016.153 · Cited by 38 · see citing works
Self-citationTryon, L. D., Crilly, M. J., & Hood, D. A. (2015) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00266.2014 · Cited by 32 · see citing works
Parzych, K., Chinn, T. M., Chen, Z., Loaiza, S., Porsch, F., Valbuena, G. N., Kleijnen, M. F., Karadimitris, A., Gentleman, E., Keun, H. C., et al. (2015) · Cell Death and Disease · doi:10.1038/cddis.2015.373 · Cited by 31 · see citing works
UBE2L3, a Partner of MuRF1/TRIM63, Is Involved in the Degradation of Myofibrillar Actin and Myosin
Peris-Moreno, D., Malige, M., Claustre, A., Armani, A., Coudy‐Gandilhon, C., Deval, C., Béchet, D., Fafournoux, P., Sandri, M., Combaret, L., et al. (2021) · Cells · doi:10.3390/cells10081974 · Cited by 27 · see citing works
UFD-2 is an adaptor-assisted E3 ligase targeting unfolded proteins
Hellerschmied, D., Roessler, M., Lehner, A., Gazda, L., Stejskal, K., Imre, R., Mechtler, K., Dammermann, A., & Clausen, T. (2018) · Nature Communications · doi:10.1038/s41467-018-02924-7 · Cited by 25 · see citing works
Li, H., Ji, Z., Paulo, J. A., Gygi, S. P., & Rapoport, T. A. (2024) · Molecular Cell · doi:10.1016/j.molcel.2024.01.029 · Cited by 23 · see citing works
Group I Paks support muscle regeneration and counteract cancer‐associated muscle atrophy
Perpetuini, A. C., Cecconi, A. D. R., Chiappa, M., Martinelli, G. B., Fuoco, C., Desiderio, G., Castagnoli, L., Gargioli, C., Piccirillo, R., & Cesareni, G. (2018) · Journal of Cachexia Sarcopenia and Muscle · doi:10.1002/jcsm.12303 · Cited by 23 · see citing works
Self-citationMizbani, A., Luca, E., Rushing, E. J., & Krützfeldt, J. (2016) · Development · doi:10.1242/dev.136051 · Cited by 22 · see citing works
Micro-computed tomography for non-invasive evaluation of muscle atrophy in mouse models of disease
Pasetto, L., Olivari, D., Nardo, G., Trolese, M. C., Bendotti, C., Piccirillo, R., & Bonetto, V. (2018) · PLoS ONE · doi:10.1371/journal.pone.0198089 · Cited by 20 · see citing works
Self-citationSweeney, H. L., Masiero, S., & Carraro, U. (2022) · European Journal of Translational Myology · doi:10.4081/ejtm.2022.10440 · Cited by 19 · see citing works
Breakdown of Filamentous Myofibrils by the UPS–Step by Step
Aweida, D., & Cohen, S. (2021) · Biomolecules · doi:10.3390/biom11010110 · Cited by 19 · see citing works
Schulte, M. D., Hochmuth, K. G., Steadham, E. M., Lonergan, S. M., Hansen, S. L., & Huff-Lonergan, E. J. (2022) · Journal of Proteomics · doi:10.1016/j.jprot.2022.104756 · Cited by 17 · see citing works
Viswanathan, M., Blice‐Baum, A. C., Sang, T., & Cammarato, A. (2016) · Journal of Cardiovascular Development and Disease · doi:10.3390/jcdd3020019 · Cited by 17 · see citing works
Aberrant signaling and senescence associated protein degradation
Ferbeyre, G. (2017) · Experimental Gerontology · doi:10.1016/j.exger.2017.06.016 · Cited by 16 · see citing works
Cecconi, A. D. R., Barone, M., Gaspari, S., Tortarolo, M., Bendotti, C., Porcu, L., Terribile, G., & Piccirillo, R. (2022) · Journal of Cachexia Sarcopenia and Muscle · doi:10.1002/jcsm.13011 · Cited by 14 · see citing works
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Aweida, D., & Cohen, S. (2022) · EMBO Reports · doi:10.15252/embr.202255175 · Cited by 12 · see citing works
USP3 : Key deubiquitylation enzyme in human diseases
Zhang, H., Liu, W., Wu, Y., & Chen, C. (2024) · Cancer Science · doi:10.1111/cas.16178 · Cited by 15 · see citing works
Chaperoning myosin assembly in muscle formation and aging
Pokrzywa, W., & Hoppe, T. (2013) · Worm · doi:10.4161/worm.25644 · Cited by 15 · see citing works
Lee, Y. J., Kim, G. H., Park, S. I., & Lim, J. H. (2019) · Journal of Cellular and Molecular Medicine · doi:10.1111/jcmm.14799 · Cited by 15 · see citing works
Phosphorylation Modifications Regulating Cardiac Protein Quality Control Mechanisms
Mishra, S., Dunkerly-Eyring, B. L., Keceli, G., & Ranek, M. J. (2020) · Frontiers in Physiology · doi:10.3389/fphys.2020.593585 · Cited by 14 · see citing works
Jang, H., Jang, E. R., Wilson, P. G., Anderson, D., & Galperin, E. (2019) · Molecular Biology of the Cell · doi:10.1091/mbc.e19-03-0144 · Cited by 11 · see citing works
Chen, S., Chen, J., Wang, C., He, T., Yang, Z., Huang, W., Luo, X., & Zhu, H. (2023) · The Journal of Nutritional Biochemistry · doi:10.1016/j.jnutbio.2023.109555 · Cited by 12 · see citing works
Losing pieces without disintegrating: Contractile protein loss during muscle atrophy
Schiaffino, S. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1700190114 · Cited by 12 · see citing works
Proteasome gene expression is controlled by coordinated functions of multiple transcription factors
Gilda, J. E., Nahar, A., Kasiviswanathan, D., Tropp, N., Gilinski, T., Lahav, T., Alexandrovich, D., Mandel-Gutfreund, Y., Park, S., & Shemer, S. (2024) · Journal of Cell Biology · doi:10.1083/jcb.202402046 · Cited by 6 · see citing works
Blocking Cancer Growth with Less POMP or Proteasomes
Goldberg, A. L., Zhao, J., & Collins, G. A. (2015) · Molecular Cell · doi:10.1016/j.molcel.2015.07.005 · Cited by 8 · see citing works
Self-citationAguiar, B. G. A., Padmanabhan, P. K., Dumas, C., & Papadopoulou, B. (2018) · Cellular Microbiology · doi:10.1111/cmi.12867 · Cited by 8 · see citing works
Carraro, U., Bittmann, F. N., Ivanova, E. P., Jónsson, H., Kern, H., Leeuwenburgh, C., Mayr, W., Scalabrin, M., Schaefer, L. V., Smeriglio, P., et al. (2022) · European Journal of Translational Myology · doi:10.4081/ejtm.2022.10521 · Cited by 7 · see citing works
Deletion of muscle Igf1 exacerbates disuse atrophy weakness in mice
Spradlin, R. A., Vassilakos, G., Matheny, M. K., Jones, N. C., Goldman, J., Lei, H., & Barton, E. R. (2021) · Journal of Applied Physiology · doi:10.1152/japplphysiol.00090.2021 · Cited by 7 · see citing works
Mitochondrial Maintenance in Skeletal MusclePreprint
de Smalen, L. M., & Handschin, C. (2024) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a041514 · Cited by 7 · see citing works
Lehmann, S., Bass, J. J., Barratt, T. F., Ali, M., & Szewczyk, N. J. (2017) · Journal of Cachexia Sarcopenia and Muscle · doi:10.1002/jcsm.12196 · Cited by 5 · see citing works
Rai, M., Baddeley, H. J. E., Chuang, C.-L., Platt, A., Curley, M., Finkelstein, D., & Demontis, F. (2025) · npj Aging · doi:10.1038/s41514-025-00288-z · Cited by 5 · see citing works
The protein segregase VCP/p97 promotes host antifungal defense via regulation of SYK activation
Shao, Z., Wang, L., Cao, L., Chen, T., Jia, X., Sun, W., Gao, C., & Xiao, H. Q. (2024) · PLoS Pathogens · doi:10.1371/journal.ppat.1012674 · Cited by 4 · see citing works
Tortarolo, M., Cecconi, A. D. R., Camporeale, L., Margotta, C., Nardo, G., Pasetto, L., Bonetto, V., Galbiati, M., Crippa, V., Poletti, A., et al. (2024) · Neurobiology of Disease · doi:10.1016/j.nbd.2024.106576 · Cited by 4 · see citing works
Self-citationIntegration of proteomic and genetic approaches to assess developmental muscle atrophy
Brooks, D. S., Vishal, K., Bawa, S., Alder, A., & Geisbrecht, E. R. (2021) · Journal of Experimental Biology · doi:10.1242/jeb.242698 · Cited by 3 · see citing works
Zappia, M. P., Damschroder, D., Westacott, A., Wessells, R. J., & Frolov, M. V. (2024) · G3 Genes Genomes Genetics · doi:10.1093/g3journal/jkae039 · Cited by 2 · see citing works
Important Factors in the Formation and Clearance of Protein Aggregation
(2013) · Journal of Developing Drugs · doi:10.4172/2329-6631.1000e136 · Cited by 2 · see citing works
Signaling Pathways That Promote Muscle Catabolism in Cachexia
Gilda, J. E., & Cohen, S. (2022) · Springer eBooks · doi:10.1007/978-3-031-09518-4_5 · Cited by 2 · see citing works
Dysregulation of the ubiquitin–proteasome system in aging skeletal muscle
Song, G., Lee, B.-Y., & Baek, K. (2026) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2026.119504 · Cited by 1 · see citing works
Rai, M., Wang, Y., Stephan, A., Nityanandam, A., & Demontis, F. (2026) · G3 Genes Genomes Genetics · doi:10.1093/g3journal/jkag245 · Cited by 1 · see citing works
Metabolic and proteomic pathways in muscle involved in beef tenderness development
Schulte, M. D. (2022) · doi:10.31274/td-20240329-502 · Cited by 1 · see citing works
Lysine methylation signaling in skeletal muscle biology: from myogenesis to clinical insights
Cordeiro-Spinetti, E., & Rothbart, S. B. (2023) · Biochemical Journal · doi:10.1042/bcj20230223
Honda, M., Fujimori, H., & Aiba, T. (2026) · Biological and Pharmaceutical Bulletin · doi:10.1248/bpb.b25-00571
Ngo, T. H. P., & Lee, W. (2026) · Biomolecules · doi:10.3390/biom16101398
- Authors
- Piccirillo, R., & Goldberg, A. L.
- Affiliations
- Harvard University (US)
- Corresponding author
- Goldberg, Alfred L
- Venue
- The EMBO Journal
- Published
- 2012-07-06
- Volume
- 31
- Issue
- 15
- Pages
- 3334-3350
- ISSN
- 0261-4189 (ISSN-L)
- 1460-2075
- PMC
- PMC3411080
- OpenAlex
- W1828817591
- Cited by
- 85
- References
- 77
- Citations by year
- 2026: 4 · 2025: 1 · 2024: 7 · 2023: 5 · 2022: 8 · 2021: 9 · 2020: 8 · 2019: 4 · 2018: 7 · 2017: 4 · 2016: 7 · 2015: 4 · 2014: 5 · 2013: 12
- FWCI
- 2.70
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- The EMBO Journal (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Muscular Dystrophy Association
- National Institutes of Health
- Takeda Oncology
- National Institute of Arthritis and Musculoskeletal and Skin Diseases (AR055255, R01AR055255)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Muscle Physiology and Disorders
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Keywords
- muscle atrophy, myofibrillar protein degradation, ubiquitinated proteins, denervation, food deprivation, FOXO3, proteasome, lysosomes, Ufd1, p47phox, muscle hypertrophy, myotubes
- MeSH terms
- Acceleration, Valosin Containing Protein, Adenosine Triphosphatases, Animals, Cells, Cultured, Fasting, Male, Mice, Transgenic, Muscle Denervation, Muscle Proteins, Muscular Atrophy, Muscle, Skeletal, Muscle Fibers, Skeletal, Cell Cycle Proteins, Mutant Proteins, Mice, Proteolysis
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