The AAA-ATPase p97 is essential for outer mitochondrial membrane protein turnover
Open accessAbstract
Recent studies have revealed a role for the ubiquitin/proteasome system in the regulation and turnover of outer mitochondrial membrane (OMM)-associated proteins. Although several molecular components required for this process have been identified, the mechanism of proteasome-dependent degradation of OMM-associated proteins is currently unclear. We show that an AAA-ATPase, p97, is required for the proteasomal degradation of Mcl1 and Mfn1, two unrelated OMM proteins with short half-lives. A number of biochemical assays, as well as imaging of changes in localization of photoactivable GFP-fused Mcl1, revealed that p97 regulates the retrotranslocation of Mcl1 from mitochondria to the cytosol, prior to, or concurrent with, proteasomal degradation. Mcl1 retrotranslocation from the OMM depends on the activity of the ATPase domain of p97. Furthermore, p97-mediated retrotranslocation of Mcl1 can be recapitulated in vitro, confirming a direct mitochondrial role for p97. Our results establish p97 as a novel and essential component of the OMM-associated protein degradation pathway.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
p97 provides the driving force to extract Mfn1, Mfn2, and MCL1 from the OMM and chaperone them to the proteasome.
“p97 provides the driving force to extract Mfn1, Mfn2, and the anti-apoptotic protein MCL1 from the OMM and chaperone them to the proteasome [49, 50].”
From The connection between the dynamic remodeling of the mitochondrial network and the regulation of muscle mass (2021) · cites this paper as [50]
p97/VCP is critical in the retrotranslocation and degradation of endoplasmic reticulum-associated proteins (ERAD) and mitochondrial proteins (MAD).
“p97/VCP is critical in the retrotranslocation and degradation of endoplasmic reticulum-associated proteins (ERAD) [47] and mitochondrial proteins ( MAD) [49, 50].”
From The connection between the dynamic remodeling of the mitochondrial network and the regulation of muscle mass (2021) · cites this paper as [50]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Parkin is recruited selectively to impaired mitochondria and promotes their autophagy
Narendra, D., Tanaka, A., Suen, D.-F., & Youle, R. J. (2008) · The Journal of Cell Biology · doi:10.1083/jcb.200809125 · Cited by 4,026 · see citing works
A Photoactivatable GFP for Selective Photolabeling of Proteins and Cells
Patterson, G. H., & Lippincott‐Schwartz, J. (2002) · Science · doi:10.1126/science.1074952 · Cited by 1,612 · see citing works
The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol
Ye, Y., Meyer, H. H., & Rapoport, T. A. (2001) · Nature · doi:10.1038/414652a · Cited by 1,099 · see citing works
A membrane protein complex mediates retro-translocation from the ER lumen into the cytosol
Ye, Y., Shibata, Y., Yun, C., Ron, D., & Rapoport, T. A. (2004) · Nature · doi:10.1038/nature02656 · Cited by 963 · see citing works
Regulation of mitochondrial morphology through proteolytic cleavage of OPA1
Ishihara, N., Fujita, Y., Oka, T., & Mihara, K. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601184 · Cited by 899 · see citing works
Zhong, Q., Gao, W., Du, F., & Wang, X. (2005) · Cell · doi:10.1016/j.cell.2005.06.009 · Cited by 844 · see citing works
<i>Drosophila</i> Parkin requires PINK1 for mitochondrial translocation and ubiquitinates Mitofusin
Ziviani, E., Tao, R. N., & Whitworth, A. J. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0913485107 · Cited by 735 · see citing works
Characterization of the human heart mitochondrial proteome
Taylor, S. W., Fahy, E., Zhang, B., Glenn, G. M., Warnock, D. E., Wiley, S. E., Murphy, A. N., Gaucher, S. P., Capaldi, R., Gibson, B. W., et al. (2003) · Nature Biotechnology · doi:10.1038/nbt793 · Cited by 702 · see citing works
Deubiquitinase USP9X stabilizes MCL1 and promotes tumour cell survival
Schwickart, M., Huang, X., Lill, J. R., Liu, J., Ferrando, R., French, D. M., Maecker, H., O’Rourke, K., Bazan, F., Eastham-Anderson, J., et al. (2010) · Nature · doi:10.1038/nature08646 · Cited by 628 · see citing works
Cargo-Selected Transport from the Mitochondria to Peroxisomes Is Mediated by Vesicular Carriers
Neuspiel, M., Schauss, A. C., Braschi, E., Zunino, R., Rippstein, P. U., Rachubinski, R. A., Andrade-Navarro, M. A., & McBride, H. M. (2008) · Current Biology · doi:10.1016/j.cub.2007.12.038 · Cited by 592 · see citing works
Elimination of Mcl-1 is required for the initiation of apoptosis following ultraviolet irradiationPreprint
Nijhawan, D., Fang, M., Traer, E. A., Zhong, Q., Gao, W., Du, F., & Wang, X. (2003) · Genes & Development · doi:10.1101/gad.1093903 · Cited by 590 · see citing works
The mitochondrial E3 ubiquitin ligase MARCH5 is required for Drp1 dependent mitochondrial division
Karbowski, M., Neutzner, A., & Youle, R. J. (2007) · The Journal of Cell Biology · doi:10.1083/jcb.200611064 · Cited by 474 · see citing works
Self-citationRegulation of the mitochondrial dynamin-like protein Opa1 by proteolytic cleavage
Griparić, L., Kanazawa, T., & van der Bliek, A. M. (2007) · The Journal of Cell Biology · doi:10.1083/jcb.200704112 · Cited by 467 · see citing works
Rapé, M., Hoppe, T., Gorr, I. H., Kalocay, M., Richly, H., & Jentsch, S. (2001) · Cell · doi:10.1016/s0092-8674(01)00595-5 · Cited by 438 · see citing works
Karbowski, M., Arnoult, D., Chen, H., Chan, D. C., Smith, C. L., & Youle, R. J. (2004) · The Journal of Cell Biology · doi:10.1083/jcb.200309082 · Cited by 433 · see citing works
Self-citationMARCH‐V is a novel mitofusin 2‐ and Drp1‐binding protein able to change mitochondrial morphology
Nakamura, N., Kimura, Y. N., Tokuda, M., Honda, S., & Hirose, S. (2006) · EMBO Reports · doi:10.1038/sj.embor.7400790 · Cited by 419 · see citing works
A novel mitochondrial ubiquitin ligase plays a critical role in mitochondrial dynamics
Yonashiro, R., Ishido, S., Kyo, S., Fukuda, T., Gotō, E., Matsuki, Y., Ohmura‐Hoshino, M., Sada, K., Hotta, H., Yamamura, H., et al. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601249 · Cited by 378 · see citing works
Braun, S. J., Matuschewski, K., Rapé, M., Thoms, S., & Jentsch, S. (2002) · The EMBO Journal · doi:10.1093/emboj/21.4.615 · Cited by 330 · see citing works
DNA damage response and MCL-1 destruction initiate apoptosis in adenovirus-infected cellsPreprint
Cuconati, A., Mukherjee, C., Perez, D., & White, E. (2003) · Genes & Development · doi:10.1101/gad.1156903 · Cited by 314 · see citing works
HRD4/NPL4 Is Required for the Proteasomal Processing of Ubiquitinated ER Proteins
Bays, N. W., Wilhovsky, S., Goradia, A., Hodgkiss-Harlow, K. D., & Hampton, R. Y. (2001) · Molecular Biology of the Cell · doi:10.1091/mbc.12.12.4114 · Cited by 309 · see citing works
Yang, T., Kozopas, K. M., & Craig, R. W. (1995) · The Journal of Cell Biology · doi:10.1083/jcb.128.6.1173 · Cited by 299 · see citing works
Cdc48 (p97): a ‘molecular gearbox’ in the ubiquitin pathway?
Jentsch, S., & Rumpf, S. (2006) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2006.11.005 · Cited by 280 · see citing works
Sequence and characterization of cytoplasmic nuclear protein import factor p97.
Chi, N. C., Adam, E. J., & Adam, S. A. (1995) · The Journal of Cell Biology · doi:10.1083/jcb.130.2.265 · Cited by 270 · see citing works
The formation of golgi stacks from vesiculated golgi membranes requires two distinct fusion events
Acharya, U. R., Jacobs, R., Peters, J., Watson, N., Farquhar, M. G., & Malhotra, V. (1995) · Cell · doi:10.1016/0092-8674(95)90269-4 · Cited by 208 · see citing works
S-Nitrosylation of Bcl-2 Inhibits Its Ubiquitin-Proteasomal Degradation
Azad, N., Vallyathan, V., Wang, L., Tantishaiyakul, V., Stehlik, C., Leonard, S. S., & Rojanasakul, Y. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m602551200 · Cited by 194 · see citing works
Nakamura, N., & Hirose, S. (2008) · Molecular Biology of the Cell · doi:10.1091/mbc.e07-11-1103 · Cited by 178 · see citing works
Mitochondrial protein oxidation and degradation in response to oxidative stress and aging
Bulteau, A., Szweda, L. I., & Friguet, B. (2006) · Experimental Gerontology · doi:10.1016/j.exger.2006.03.013 · Cited by 159 · see citing works
Kobayashi, T., Tanaka, K., Inoue, K., & Kakizuka, A. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m207783200 · Cited by 148 · see citing works
Hsp90 Inhibition Decreases Mitochondrial Protein Turnover
Margineantu, D. H., Emerson, C. B., Diaz, D., & Hockenbery, D. M. (2007) · PLoS ONE · doi:10.1371/journal.pone.0001066 · Cited by 147 · see citing works
Tang, W. K., Li, D., Li, C.-C., Esser, L., Dai, R., Guo, L., & Xia, D. (2010) · The EMBO Journal · doi:10.1038/emboj.2010.104 · Cited by 143 · see citing works
p97: The Cell's Molecular Purgatory?
Halawani, D., & Latterich, M. (2006) · Molecular Cell · doi:10.1016/j.molcel.2006.06.003 · Cited by 143 · see citing works
Real-Time Fluorescence Detection of ERAD Substrate Retrotranslocation in a Mammalian In Vitro System
Wahlman, J., Demartino, G., Skach, W. R., Bulleid, N. J., Brodsky, J. L., & Johnson, A. E. (2007) · Cell · doi:10.1016/j.cell.2007.03.046 · Cited by 136 · see citing works
Reifschneider, N. H., Goto, S., Nakamoto, H., Takahashi, R., Sugawa, M. D., Dencher, N. A., & Krause, F. (2006) · Journal of Proteome Research · doi:10.1021/pr0504440 · Cited by 126 · see citing works
The Turnover of the Protein Components of Mitochondria from Rat Liver, Kidney, and Brain
Beattie, D. S., BASFORD, R. E., & Koritz, S. B. (1967) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)99496-2 · Cited by 104 · see citing works
Ngo, J. K., & Davies, K. J. A. (2007) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1404.015 · Cited by 104 · see citing works
Zhang, J., Li, X., Mueller, M., Wang, Y., Zong, C., Deng, N., Vondriska, T. M., Liem, D. A., Yang, J., Kôrge, P., et al. (2008) · PROTEOMICS · doi:10.1002/pmic.200700851 · Cited by 100 · see citing works
Self-citationIdentification of SVIP as an endogenous inhibitor of endoplasmic reticulum-associated degradation
Ballar, P., Zhong, Y., Nagahama, M., Tagaya, M., Shen, Y., & Fang, S. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m704446200 · Cited by 93 · see citing works
Self-citationGarza, R. M., Sato, B. K., & Hampton, R. Y. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m809607200 · Cited by 87 · see citing works
IBRDC2, an IBR‐type E3 ubiquitin ligase, is a regulatory factor for Bax and apoptosis activation
Bénard, G., Neutzner, A., Peng, G., Wang, C., Livák, F., Youle, R. J., & Karbowski, M. (2010) · The EMBO Journal · doi:10.1038/emboj.2010.39 · Cited by 86 · see citing works
Self-citationHuntingtin Interacts with the Cue Domain of gp78 and Inhibits gp78 Binding to Ubiquitin and p97/VCP
Yang, H., Liu, C., Zhong, Y., Luo, S., Monteiro, M. J., & Fang, S. (2010) · PLoS ONE · doi:10.1371/journal.pone.0008905 · Cited by 85 · see citing works
Self-citationCrucial Mitochondrial Impairment upon CDC48 Mutation in Apoptotic Yeast
Braun, R. J., Zischka, H., Madeo, F., Eisenberg, T., Wissing, S., Büttner, S., Engelhardt, S. M., Büringer, D., & Ueffing, M. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.m513699200 · Cited by 82 · see citing works
Analysis of Nucleotide Binding to P97 Reveals the Properties of a Tandem AAA Hexameric ATPase
Briggs, L. C., Baldwin, G. S., Miyata, N., Kondo, H., Zhang, X., & Freemont, P. S. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m709632200 · Cited by 79 · see citing works
Role of the Ubiquitin Conjugation System in the Maintenance of Mitochondrial Homeostasis
Neutzner, A., Bénard, G., Youle, R. J., & Karbowski, M. (2008) · Annals of the New York Academy of Sciences · doi:10.1196/annals.1427.012 · Cited by 75 · see citing works
Self-citationOuter Mitochondrial Membrane Protein Degradation by the Proteasome
Neutzner, A., Youle, R. J., & Karbowski, M. (2007) · Novartis Foundation symposium · doi:10.1002/9780470725207.ch2 · Cited by 72 · see citing works
Self-citationBar‐Nun, S. (2006) · Springer eBooks · doi:10.1007/3-540-28007-3_5 · Cited by 68 · see citing works
Soetandyo, N., & Ye, Y. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.131649 · Cited by 34 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Mitochondria: In Sickness and in Health
Nunnari, J., & Suomalainen, A. (2012) · Cell · doi:10.1016/j.cell.2012.02.035 · Cited by 3,479 · see citing works
Mitophagy and Quality Control Mechanisms in Mitochondrial Maintenance
Pickles, S., Vigié, P., & Youle, R. J. (2018) · Current Biology · doi:10.1016/j.cub.2018.01.004 · Cited by 2,081 · see citing works
Mitochondrial form and function
Friedman, J. R., & Nunnari, J. (2014) · Nature · doi:10.1038/nature12985 · Cited by 1,803 · see citing works
Mitochondrial Dynamics — Mitochondrial Fission and Fusion in Human Diseases
Archer, S. L. (2013) · New England Journal of Medicine · doi:10.1056/nejmra1215233 · Cited by 1,103 · see citing works
Mitochondrial dynamics and inheritance during cell division, development and disease
Mishra, P., & Chan, D. C. (2014) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3877 · Cited by 1,038 · see citing works
A new pathway for mitochondrial quality control: Mitochondrial-derived vesicles
Sugiura, A., McLelland, G., Fon, E. A., & McBride, H. M. (2014) · The EMBO Journal · doi:10.15252/embj.201488104 · Cited by 862 · see citing works
Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin system
Meyer, H. H., Bug, M., & Bremer, S. (2012) · Nature Cell Biology · doi:10.1038/ncb2407 · Cited by 803 · see citing works
Yoshii, S. R., Kishi, C., Ishihara, N., & Mizushima, N. (2011) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.209338 · Cited by 612 · see citing works
Mitochondria: The Next (Neurode)Generation
Schon, E. A., & Przedborski, S. (2011) · Neuron · doi:10.1016/j.neuron.2011.06.003 · Cited by 568 · see citing works
Aggrephagy: Selective Disposal of Protein Aggregates by Macroautophagy
Lamark, T., & Johansen, T. (2012) · International Journal of Cell Biology · doi:10.1155/2012/736905 · Cited by 490 · see citing works
Quality control of the mitochondrial proteome
Song, J., Herrmann, J. M., & Becker, T. (2020) · Nature Reviews Molecular Cell Biology · doi:10.1038/s41580-020-00300-2 · Cited by 492 · see citing works
Quality control of the mitochondrion
Ng, M. Y. W., Wai, T., & Simonsen, A. (2021) · Developmental Cell · doi:10.1016/j.devcel.2021.02.009 · Cited by 453 · see citing works
Mitochondrial quality control and muscle mass maintenance.
Romanello, V., & Sandri, M. (2016) · Frontiers in Physiology · doi:10.3389/fphys.2015.00422 · Cited by 434 · see citing works
Mechanisms of Selective Autophagy
Lamark, T., & Johansen, T. (2021) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev-cellbio-120219-035530 · Cited by 429 · see citing works
Guerriero, C. J., & Brodsky, J. L. (2012) · Physiological Reviews · doi:10.1152/physrev.00027.2011 · Cited by 416 · see citing works
VCP/p97-Mediated Unfolding as a Principle in Protein Homeostasis and Signaling
van den Boom, J., & Meyer, H. H. (2017) · Molecular Cell · doi:10.1016/j.molcel.2017.10.028 · Cited by 408 · see citing works
Cleaning up in the endoplasmic reticulum: ubiquitin in charge
Christianson, J. C., & Ye, Y. (2014) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2793 · Cited by 387 · see citing works
Covalent and allosteric inhibitors of the ATPase VCP/p97 induce cancer cell death
Magnaghi, P., D’Alessio, R., Valsasina, B., Avanzi, N. R., Rizzi, S., Asa, D., Gasparri, F., Cozzi, L., Cucchi, U., Orrenius, C., et al. (2013) · Nature Chemical Biology · doi:10.1038/nchembio.1313 · Cited by 369 · see citing works
Mitochondrial Quality Control Mediated by PINK1 and Parkin: Links to ParkinsonismPreprint
Narendra, D. P., Walker, J. E., & Youle, R. J. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a011338 · Cited by 341 · see citing works
Regulation of Mitochondrial ATP Production: Ca2+ Signaling and Quality Control
Boyman, L., Karbowski, M., & Lederer, W. J. (2019) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2019.10.007 · Cited by 309 · see citing works
Self-citationMitochondrial degradation: Mitophagy and beyond
Uoselis, L., Nguyen, T. N., & Lazarou, M. (2023) · Molecular Cell · doi:10.1016/j.molcel.2023.08.021 · Cited by 270 · see citing works
Chloroplast Biogenesis Is Regulated by Direct Action of the Ubiquitin-Proteasome System
Ling, Q., Huang, W., Baldwin, A. J., & Jarvis, P. (2012) · Science · doi:10.1126/science.1225053 · Cited by 259 · see citing works
Regulating mitochondrial outer membrane proteins by ubiquitination and proteasomal degradation
Karbowski, M., & Youle, R. J. (2011) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2011.05.007 · Cited by 256 · see citing works
Self-citationSchellenberg, B., Wang, P., Keeble, J. A., Rodriguez-Enriquez, R., Walker, S., Owens, T. W., Foster, F., Tanianis-Hughes, J., Brennan, K., Streuli, C. H., et al. (2013) · Molecular Cell · doi:10.1016/j.molcel.2012.12.022 · Cited by 237 · see citing works
Brodsky, J. L., & Skach, W. R. (2011) · Current Opinion in Cell Biology · doi:10.1016/j.ceb.2011.05.004 · Cited by 242 · see citing works
Mitochondrial Dysfunction as a Driver of Cognitive Impairment in Alzheimer’s Disease
Sharma, C., Kim, S., Nam, Y., Jung, U. J., & Kim, S. R. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22094850 · Cited by 242 · see citing works
Detection and Clearance of Damaged Lysosomes by the Endo-Lysosomal Damage Response and Lysophagy
Papadopoulos, C., & Meyer, H. (2017) · Current Biology · doi:10.1016/j.cub.2017.11.012 · Cited by 230 · see citing works
Dysfunctional Mitochondria and Mitophagy as Drivers of Alzheimer’s Disease Pathogenesis
Chakravorty, A., Jetto, C. T., & Manjithaya, R. R. (2019) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2019.00311 · Cited by 219 · see citing works
Chen, Y., Umanah, G. K. E., Dephoure, N., Andrabi, S. A., Gygi, S. P., Dawson, T. M., Dawson, V. L., & Rutter, J. P. (2014) · The EMBO Journal · doi:10.15252/embj.201487943 · Cited by 217 · see citing works
Maharjan, S., Oku, M., Tsuda, M., Hoseki, J., & Sakai, Y. (2014) · Scientific Reports · doi:10.1038/srep05896 · Cited by 212 · see citing works
Li, S., Xu, S., Roelofs, B. A., Boyman, L., Lederer, W. J., Sesaki, H., & Karbowski, M. (2014) · The Journal of Cell Biology · doi:10.1083/jcb.201404050 · Cited by 210 · see citing works
Self-citationGuo, X., Sun, X., Hu, D., Wang, Y.-J., Fujioka, H., Vyas, R., Chakrapani, S., Joshi, A. U., Luo, Y., Mochly-Rosen, D., et al. (2016) · Nature Communications · doi:10.1038/ncomms12646 · Cited by 200 · see citing works
Self-citationTruban, D., Hou, X., Caulfield, T. R., Fiesel, F. C., & Springer, W. (2016) · Journal of Parkinson’s Disease · doi:10.3233/jpd-160989 · Cited by 237 · see citing works
Romanello, V., & Sandri, M. (2021) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-020-03662-0 · Cited by 197 · see citing works
Mitochondrial protein quality control during biogenesis and aging
Baker, B. M., & Haynes, C. M. (2011) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2011.01.004 · Cited by 192 · see citing works
Sulkshane, P., Ram, J., Thakur, A., Reis, N., Kleifeld, O., & Glickman, M. H. (2021) · Redox Biology · doi:10.1016/j.redox.2021.102047 · Cited by 195 · see citing works
Recent advances in p97/VCP/Cdc48 cellular functions
Yamanaka, K., Sasagawa, Y., & Ogura, T. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2011.07.001 · Cited by 191 · see citing works
Control of mitochondrial biogenesis and function by the ubiquitin–proteasome system
Brągoszewski, P., Turek, M., & Chacińska, A. (2017) · Open Biology · doi:10.1098/rsob.170007 · Cited by 186 · see citing works
A Mighty “Protein Extractor” of the Cell: Structure and Function of the p97/CDC48 ATPase
Ye, Y., Tang, W. K., Zhang, T., & Xia, D. (2017) · Frontiers in Molecular Biosciences · doi:10.3389/fmolb.2017.00039 · Cited by 181 · see citing works
Neurodegeneration as a consequence of failed mitochondrial maintenance
Karbowski, M., & Neutzner, A. (2011) · Acta Neuropathologica · doi:10.1007/s00401-011-0921-0 · Cited by 182 · see citing works
Self-citationMitochondrial quality control by the ubiquitin–proteasome system
Taylor, E. B., & Rutter, J. P. (2011) · Biochemical Society Transactions · doi:10.1042/bst0391509 · Cited by 181 · see citing works
Song, W., Yi, Y., Sutovsky, M., Meyers, S. A., & Šutovský, P. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1605844113 · Cited by 178 · see citing works
Blythe, E. E., Olson, K. C., Chau, V., & Deshaies, R. J. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1706205114 · Cited by 176 · see citing works
USP30 deubiquitylates mitochondrial Parkin substrates and restricts apoptotic cell death
Liang, J. R., Martinez, A., Lane, J. D., Mayor, U., Clague, M. J., & Urbé, S. (2015) · EMBO Reports · doi:10.15252/embr.201439820 · Cited by 169 · see citing works
Structure and function of the AAA+ ATPase p97/Cdc48p
Xia, D., Tang, W. K., & Ye, Y. (2016) · Gene · doi:10.1016/j.gene.2016.02.042 · Cited by 159 · see citing works
Ubiquitin-dependent chloroplast-associated protein degradation in plants
Ling, Q., Broad, W. J., Trösch, R., Töpel, M., Demiral, T., Lymperopoulos, P., Baldwin, A. J., & Jarvis, P. (2019) · Science · doi:10.1126/science.aav4467 · Cited by 162 · see citing works
Hänzelmann, P., & Schindelin, H. (2017) · Frontiers in Molecular Biosciences · doi:10.3389/fmolb.2017.00021 · Cited by 152 · see citing works
A Futile Battle? Protein Quality Control and the Stress of Aging
Higuchi‐Sanabria, R., Frankino, P. A., Paul, J. W., Tronnes, S. U., & Dillin, A. G. (2018) · Developmental Cell · doi:10.1016/j.devcel.2017.12.020 · Cited by 149 · see citing works
Xu, S., Cherok, E., Das, S., Li, S., Roelofs, B. A., Ge, S. X., Polster, B. M., Boyman, L., Lederer, W. J., Wang, C., et al. (2015) · Molecular Biology of the Cell · doi:10.1091/mbc.e15-09-0678 · Cited by 146 · see citing works
Self-citationUbiquitin-Dependent Degradation of Mitochondrial Proteins Regulates Energy Metabolism
Lavie, J., Belvalet, H. D., Sonon, S., Ion, A. M., Dumon, E., Melser, S., Lacombe, D., Dupuy, J., Lalou, C., & Bénard, G. (2018) · Cell Reports · doi:10.1016/j.celrep.2018.05.013 · Cited by 136 · see citing works
Mitochondrial quality control pathways as determinants of metabolic health
Held, N. M., & Houtkooper, R. H. (2015) · BioEssays · doi:10.1002/bies.201500013 · Cited by 128 · see citing works
Golgi organization is regulated by proteasomal degradation
Eisenberg‐Lerner, A., Benyair, R., Hizkiahou, N., Nudel, N., Maor, R., Kramer, M. P., Shmueli, M. D., Zigdon, I., Lev, M. C., Ulman, A., et al. (2020) · Nature Communications · doi:10.1038/s41467-019-14038-9 · Cited by 125 · see citing works
Self-citationControl of membrane fluidity: the OLE pathway in focus
Ballweg, S., & Ernst, R. (2016) · Biological Chemistry · doi:10.1515/hsz-2016-0277 · Cited by 118 · see citing works
ULK1 promotes mitophagy via phosphorylation and stabilization of BNIP3
Poole, L. P., Bock-Hughes, A., Berardi, D. E., & Macleod, K. F. (2021) · Scientific Reports · doi:10.1038/s41598-021-00170-4 · Cited by 112 · see citing works
Ross, J. M., Olson, L., & Coppotelli, G. (2015) · International Journal of Molecular Sciences · doi:10.3390/ijms160819458 · Cited by 109 · see citing works
Tollip coordinates Parkin‐dependent trafficking of mitochondrial‐derived vesicles
Ryan, T. A., Phillips, E. O., Collier, C. L., Robinson, A., Routledge, D., Wood, R. E., Assar, E. A., & Tumbarello, D. A. (2020) · The EMBO Journal · doi:10.15252/embj.2019102539 · Cited by 109 · see citing works
Segref, A., Kevei, É., Pokrzywa, W., Schmeißer, K., Mansfeld, J., Livnat‐Levanon, N., Ensenauer, R. E., Glickman, M. H., Ristow, M., & Hoppe, T. (2014) · Cell Metabolism · doi:10.1016/j.cmet.2014.01.016 · Cited by 103 · see citing works
Structure, Dynamics and Function of the 26S Proteasome
Mao, Y. (2020) · Sub-cellular biochemistry/Subcellular biochemistry · doi:10.1007/978-3-030-58971-4_1 · Cited by 105 · see citing works
Proteolytic control of mitochondrial function and morphogenesis
Anand, R., Langer, T., & Baker, M. J. (2012) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2012.06.025 · Cited by 104 · see citing works
The small GTPase Arf1 modulates mitochondrial morphology and function
Ackema, K. B., Hench, J., Böckler, S., Wang, S. C., Sauder, U., Mergentaler, H., Westermann, B., Bard, F., Frank, S., & Spang, A. (2014) · The EMBO Journal · doi:10.15252/embj.201489039 · Cited by 103 · see citing works
Cdc48: A Swiss Army Knife of Cell Biology
Baek, G. H., Cheng, H., Choe, V., Bao, X. R., Shao, J., Luo, S., & Rao, H. (2013) · Journal of Amino Acids · doi:10.1155/2013/183421 · Cited by 99 · see citing works
Mutations in the Human AAA+ Chaperone p97 and Related Diseases
Tang, W. K., & Xia, D. (2016) · Frontiers in Molecular Biosciences · doi:10.3389/fmolb.2016.00079 · Cited by 97 · see citing works
PINK1/Parkin-Dependent Mitochondrial Surveillance: From Pleiotropy to Parkinson's Disease
Mouton‐Liger, F., Jacoupy, M., Corvol, J., & Corti, O. (2017) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2017.00120 · Cited by 97 · see citing works
Mitochondria-Associated Proteostasis
Ruan, L., Wang, Y., Zhang, X., Tomaszewski, A., McNamara, J. T., & Li, R. (2020) · Annual Review of Biophysics · doi:10.1146/annurev-biophys-121219-081604 · Cited by 95 · see citing works
Self-citationTurn-ON fluorescent affinity labeling using a small bifunctional O-nitrobenzoxadiazole unit
Yamaguchi, T., Asanuma, M., Nakanishi, S., Saito, Y., Okazaki, M., Dodo, K., & Sodeoka, M. (2013) · Chemical Science · doi:10.1039/c3sc52704b · Cited by 96 · see citing works
Mitochondrial Protein Quality Control: The Mechanisms Guarding Mitochondrial Health
Bohovych, I., Chan, S. S. L., & Khalimonchuk, O. (2014) · Antioxidants and Redox Signaling · doi:10.1089/ars.2014.6199 · Cited by 96 · see citing works
Cherok, E., Xu, S., Li, S., Das, S., Meltzer, W. A., Zalzman, M., Wang, C., & Karbowski, M. (2016) · Molecular Biology of the Cell · doi:10.1091/mbc.e16-04-0208 · Cited by 94 · see citing works
Self-citationDuncan, O., Taylor, N. L., Carrie, C., Eubel, H., Kubiszewski-Jakubiak, S., Zhang, B., Narsai, R., Millar, A. H., & Whelan, J. (2011) · PLANT PHYSIOLOGY · doi:10.1104/pp.111.183160 · Cited by 94 · see citing works
The Role of the Transmembrane RING Finger Proteins in Cellular and Organelle Function
Nakamura, N. (2011) · Membranes · doi:10.3390/membranes1040354 · Cited by 92 · see citing works
Cheng, M., Liu, L., Lao, Y., Liao, W., Liao, M., Luo, X., Wu, J., Xie, W., Zhang, Y., & Xu, N. (2016) · Oncotarget · doi:10.18632/oncotarget.9786 · Cited by 91 · see citing works
The p97/VCP ATPase is critical in muscle atrophy and the accelerated degradation of muscle proteins
Piccirillo, R., & Goldberg, A. L. (2012) · The EMBO Journal · doi:10.1038/emboj.2012.178 · Cited by 85 · see citing works
Deruyffelaere, C., Purkrtová, Z. H., Bouchez, I., Collet, B., Cacas, J., Chardot, T., Gallois, J., & d’Andrea, S. (2018) · The Plant Cell · doi:10.1105/tpc.18.00275 · Cited by 91 · see citing works
Parkin is a disease modifier in the mutant SOD1 mouse model of ALS
Palomo, G. M., Granatiero, V., Kawamata, H., Konràd, C., Kim, M. J., Arreguin, A. J., Zhao, D., Milner, T. A., & Manfredi, G. (2018) · EMBO Molecular Medicine · doi:10.15252/emmm.201808888 · Cited by 86 · see citing works
Doa1 targets ubiquitinated substrates for mitochondria-associated degradation
Wu, X., Li, L., & Jiang, H. (2016) · The Journal of Cell Biology · doi:10.1083/jcb.201510098 · Cited by 87 · see citing works
Zhang, T., Mishra, P., Hay, B. A., Chan, D. C., & Guo, M. (2017) · eLife · doi:10.7554/elife.17834 · Cited by 84 · see citing works
Mitochondrial dismissal in mammals, from protein degradation to mitophagy
Campello, S., Strappazzon, F., & Cecconi, F. (2013) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/j.bbabio.2013.11.010 · Cited by 83 · see citing works
Mitochondrial Quality Control and Cellular Proteostasis: Two Sides of the Same Coin
Quiles, J. M., & Gustafsson, Å. B. (2020) · Frontiers in Physiology · doi:10.3389/fphys.2020.00515 · Cited by 84 · see citing works
Proteomics of muscle chronological ageing in post-menopausal women
Gueugneau, M., Coudy‐Gandilhon, C., Gourbeyre, O., Chambon, C., Combaret, L., Polge, C., Taillandier, D., Attaix, D., Friguet, B., Maier, A. B., et al. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-1165 · Cited by 82 · see citing works
Aishwarya, R., Alam, S., Abdullah, C. S., Morshed, M., Nitu, S. S., Panchatcharam, M., Miriyala, S., Kevil, C. G., & Bhuiyan, M. S. (2020) · Redox Biology · doi:10.1016/j.redox.2020.101660 · Cited by 81 · see citing works
Ullah, H., Minno, A. D., Santarcangelo, C., Khan, H. Z., & Daglia, M. (2021) · Antioxidants · doi:10.3390/antiox10040546 · Cited by 81 · see citing works
Dargemont, C., & Ossareh‐Nazari, B. (2011) · Biochimica et Biophysica Acta (BBA) - Molecular Cell Research · doi:10.1016/j.bbamcr.2011.07.011 · Cited by 76 · see citing works
Ubiquitin-dependent mitochondrial protein degradation
Heo, J.-M., & Rutter, J. P. (2011) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2011.06.002 · Cited by 76 · see citing works
Chatty Mitochondria: Keeping Balance in Cellular Protein Homeostasis
Topf, U., Wróbel, L., & Chacińska, A. (2016) · Trends in Cell Biology · doi:10.1016/j.tcb.2016.03.002 · Cited by 75 · see citing works
The Amazing Ubiquitin-Proteasome System: Structural Components and Implication in Aging
Tsakiri, E. N., & Trougakos, I. P. (2014) · International review of cytology · doi:10.1016/bs.ircmb.2014.09.002 · Cited by 78 · see citing works
Emerging roles of mitochondria in the evolution, biogenesis, and function of peroxisomes
Mohanty, A., & McBride, H. M. (2013) · Frontiers in Physiology · doi:10.3389/fphys.2013.00268 · Cited by 76 · see citing works
Exploring new pathways of neurodegeneration in ALS: The role of mitochondria quality control
Palomo, G. M., & Manfredi, G. (2014) · Brain Research · doi:10.1016/j.brainres.2014.09.065 · Cited by 76 · see citing works
Erjavec, N., Bayot, A., Gareil, M., Camougrand, N. M., Nyström, T., Friguet, B., & Bulteau, A. (2012) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2012.11.019 · Cited by 67 · see citing works
Swerdlow, N., & Wilkins, H. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21249661 · Cited by 65 · see citing works
VDAC3 As a Potential Marker of Mitochondrial Status Is Involved in Cancer and Pathology
Reina, S., Guarino, F., Magrì, A., & Pinto, V. D. (2016) · Frontiers in Oncology · doi:10.3389/fonc.2016.00264 · Cited by 64 · see citing works
Zhao, N., Zhang, A., Worthen, C., Knutson, M. D., & Enns, C. A. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1405355111 · Cited by 64 · see citing works
Mitochondrial Quality Control Governed by Ubiquitin
Ravanelli, S., den Brave, F., & Hoppe, T. (2020) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.00270 · Cited by 54 · see citing works
A protein quality control pathway at the mitochondrial outer membrane
Metzger, M. B., Scales, J. L., Dunklebarger, M., Lončarek, J., & Weissman, A. M. (2020) · eLife · doi:10.7554/elife.51065 · Cited by 62 · see citing works
AAA+ ATPases in Protein Degradation: Structures, Functions and Mechanisms
Zhang, S., & Mao, Y. (2020) · Biomolecules · doi:10.3390/biom10040629 · Cited by 61 · see citing works
Munkácsy, E., Khan, M. H., Lane, R. K., Borror, M. B., Park, J. H., Bokov, A. F., Fisher, A. L., Link, C. D., & Rea, S. L. (2016) · PLoS Genetics · doi:10.1371/journal.pgen.1006133 · Cited by 61 · see citing works
Dynamic survey of mitochondria by ubiquitin
Escobar‐Henriques, M., & Langer, T. (2014) · EMBO Reports · doi:10.1002/embr.201338225 · Cited by 60 · see citing works
Role of autophagy in muscle disease
Franco‐Romero, A., & Sandri, M. (2021) · Molecular Aspects of Medicine · doi:10.1016/j.mam.2021.101041 · Cited by 61 · see citing works
Saladi, S., Boos, F., Poglitsch, M., Meyer, H., Sommer, F., Mühlhaus, T., Schroda, M., Schuldiner, M., Madeo, F., & Herrmann, J. M. (2019) · Molecular Cell · doi:10.1016/j.molcel.2019.09.027 · Cited by 54 · see citing works
Song, W., Ballard, J. W. O., Yi, Y., & Šutovský, P. (2014) · BioMed Research International · doi:10.1155/2014/981867 · Cited by 58 · see citing works
Chen, J., Bassot, A., Giuliani, F., & Simmen, T. (2021) · Cells · doi:10.3390/cells10071789 · Cited by 57 · see citing works
A non‐canonical role of the p97 complex in RIG‐I antiviral signaling
Qian, H., Jiao, S., Shi, Z., Li, C., Meng, X., Zhang, Z., Wang, Y., Song, X., Wang, W., Zhang, R., et al. (2015) · The EMBO Journal · doi:10.15252/embj.201591888 · Cited by 56 · see citing works
Self-citation
- Authors
- Xu, S., Peng, G., Wang, Y., Fang, S., & Karbowski, M.
- Affiliations
- University of Maryland, Baltimore (US)
- Corresponding author
- Karbowski, Mariusz
- Venue
- Molecular Biology of the Cell
- Published
- 2011-02
- Volume
- 22
- Issue
- 3
- Pages
- 291-300
- ISSN
- 1059-1524 (ISSN-L)
- 1939-4586
- PMC
- PMC3031461
- OpenAlex
- W2082069715
- Cited by
- 243
- References
- 46
- Citations by year
- 2026: 5 · 2025: 6 · 2024: 12 · 2023: 14 · 2022: 12 · 2021: 16 · 2020: 21 · 2019: 16 · 2018: 17 · 2017: 15 · 2016: 23 · 2015: 15 · 2014: 23 · 2013: 19 · 2012: 16
- FWCI
- 6.26
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- cc-by-nc-sa
- Locations
- Molecular Biology of the Cell (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion, cc-by-nc-sa)
- PubMed Central (publishedVersion, cc-by-nc-sa)
- PubMed (publishedVersion)
- Funders
- National Institute of General Medical Sciences (R01GM083131)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Ubiquitin and proteasome pathways
- Health Sciences › Medicine › Epidemiology › Autophagy in Disease and Therapy
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Heat shock proteins research
- Keywords
- VCP, AAA+ ATPase, mitochondrial outer membrane, protein turnover, proteasomal degradation, Mcl-1, Mfn1, retrotranslocation, ubiquitin-proteasome system, mitochondrial protein degradation, ATPase domain
- MeSH terms
- Adenosine Triphosphatases, Cytosol, HeLa Cells, Humans, Nuclear Proteins, Recombinant Fusion Proteins, Protein Structure, Tertiary, Proto-Oncogene Proteins c-bcl-2, GTP Phosphohydrolases, Protein Transport, Mitochondrial Proteins, Membrane Transport Proteins, Mitochondrial Membrane Transport Proteins, Proteasome Endopeptidase Complex, Green Fluorescent Proteins, Mitochondrial Membranes, Protein Stability, Myeloid Cell Leukemia Sequence 1 Protein
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review