Functional asymmetry in Caenorhabditis elegans taste neurons and its computational role in chemotaxis
Open accessAbstract
Chemotaxis in Caenorhabditis elegans, like chemotaxis in bacteria, involves a random walk biased by the time derivative of attractant concentration, but how the derivative is computed is unknown. Laser ablations have shown that the strongest deficits in chemotaxis to salts are obtained when the ASE chemosensory neurons (ASEL and ASER) are ablated, indicating that this pair has a dominant role. Although these neurons are left–right homologues anatomically, they exhibit marked asymmetries in gene expression and ion preference. Here, using optical recordings of calcium concentration in ASE neurons in intact animals, we demonstrate an additional asymmetry: ASEL is an ON-cell, stimulated by increases in NaCl concentration, whereas ASER is an OFF-cell, stimulated by decreases in NaCl concentration. Both responses are reliable yet transient, indicating that ASE neurons report changes in concentration rather than absolute levels. Recordings from synaptic and sensory transduction mutants show that the ON–OFF asymmetry is the result of intrinsic differences between ASE neurons. Unilateral activation experiments indicate that the asymmetry extends to the level of behavioural output: ASEL lengthens bouts of forward locomotion (runs) whereas ASER promotes direction changes (turns). Notably, the input and output asymmetries of ASE neurons are precisely those of a simple yet novel neuronal motif for computing the time derivative of chemosensory information, which is the fundamental computation of C. elegans chemotaxis. Evidence for ON and OFF cells in other chemosensory networks suggests that this motif may be common in animals that navigate by taste and smell.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
This is similar to what has been observed in ASE.
“This is similar to what has been observed in ASE [69].”
From Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis (2013) · cites this paper as [69]
The supplied passages (labeled Abstract; page not provided) report opposing responses in ASE neurons: ASEL responds to increases in salt concentration, while ASER responds to decreases. The citing sentence does not identify what “This” refers to, so the claimed similarity cannot be assessed. (LLM, conf=0.72)
Experimental — accuracy not yet measuredChanges in salt concentration were encoded by ON and OFF chemosensory cells using an instantaneous function of a derivative operator applied to the recent history of attractant concentration.
“Changes in salt concentration were encoded by ON and OFF chemosensory cells [69] using an instantaneous function of a derivative operator applied to the recent history of attractant concentration [94]:”
From Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis (2013) · cites this paper as [69]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Fluorescent indicators for Ca2+based on green fluorescent proteins and calmodulin
Miyawaki, A., Llopis, J. L., Heim, R., McCaffery, J. M., Adams, J. A., Ikura, M., & Tsien, R. Y. (1997) · Nature · doi:10.1038/42264 · Cited by 3,250 · see citing works
A circuit for navigation in <i>Caenorhabditis elegans</i>
Gray, J. M., Hill, J. J., & Bargmann, C. I. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0409009101 · Cited by 811 · see citing works
Bargmann, C. I., & Horvitz, H. R. (1991) · Neuron · doi:10.1016/0896-6273(91)90276-6 · Cited by 740 · see citing works
Odor Coding in the Drosophila Antenna
de Bruyne, M., Foster, K., & Carlson, J. R. (2001) · Neuron · doi:10.1016/s0896-6273(01)00289-6 · Cited by 732 · see citing works
Dissecting a circuit for olfactory behaviour in Caenorhabditis elegans
Chalasani, S. H., Chronis, N., Tsunozaki, M., Gray, J. M., Ramot, D., Goodman, M. B., & Bargmann, C. I. (2007) · Nature · doi:10.1038/nature06292 · Cited by 630 · see citing works
UNC-13 is required for synaptic vesicle fusion in C. elegans
Richmond, J. E., Davis, W. S., & Jørgensen, E. M. (1999) · Nature Neuroscience · doi:10.1038/14755 · Cited by 617 · see citing works
The Fundamental Role of Pirouettes in Caenorhabditis elegans Chemotaxis
Pierce-Shimomura, J. T., Morse, T. M., & Lockery, S. R. (1999) · Journal of Neuroscience · doi:10.1523/jneurosci.19-21-09557.1999 · Cited by 536 · see citing works
Self-citationTemporal comparisons in bacterial chemotaxis.
Segall, J. E., Block, S. M., & Berg, H. C. (1986) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.83.23.8987 · Cited by 497 · see citing works
Tobin, D. M., Madsen, D. M., Kahn-Kirby, A. H., Peckol, E. L., Moulder, G. L., Barstead, R. J., Maricq, A. V., & Bargmann, C. I. (2002) · Neuron · doi:10.1016/s0896-6273(02)00757-2 · Cited by 455 · see citing works
Komatsu, H., Mori, I., Rhee, J.-S., Akaike, N., & Ohshima, Y. (1996) · Neuron · doi:10.1016/s0896-6273(00)80202-0 · Cited by 446 · see citing works
Coburn, C. M., & Bargmann, C. I. (1996) · Neuron · doi:10.1016/s0896-6273(00)80201-9 · Cited by 441 · see citing works
Guanylyl cyclase expression in specific sensory neurons: A new family of chemosensory receptors
Yu, S. S. B., Avery, L., Baude, E. J., & Garbers, D. L. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.7.3384 · Cited by 430 · see citing works
Optical Imaging of Calcium Transients in Neurons and Pharyngeal Muscle of C. elegans
Kerr, R. A., Lev‐Ram, V., Baird, G., Vincent, P., Tsien, R. Y., & Schafer, W. R. (2000) · Neuron · doi:10.1016/s0896-6273(00)81196-4 · Cited by 407 · see citing works
Self-citationThe ON and OFF channels of the visual system
Schiller, P. H. (1992) · Trends in Neurosciences · doi:10.1016/0166-2236(92)90017-3 · Cited by 365 · see citing works
Dopamine and Glutamate Control Area-Restricted Search Behavior in Caenorhabditis elegans
Hills, T. T., Brockie, P. J., & Maricq, A. V. (2004) · Journal of Neuroscience · doi:10.1523/jneurosci.1569-03.2004 · Cited by 356 · see citing works
Speese, S., Petrie, M., Schuske, K., Ailion, M., Ann, K., Iwasaki, K., Jorgensen, E. M., & Martin, T. F. J. (2007) · Journal of Neuroscience · doi:10.1523/jneurosci.1466-07.2007 · Cited by 333 · see citing works
Chapter 10 Laser Killing of Cells in Caenorhabditis elegans
Bargmann, C. I., & Avery, L. (1995) · Methods in cell biology · doi:10.1016/s0091-679x(08)61390-4 · Cited by 306 · see citing works
Synaptic Transmission Deficits inCaenorhabditis elegansSynaptobrevin Mutants
Nonet, M. L., Saifee, O., Zhao, H., Rand, J. B., & Wei, L. (1998) · Journal of Neuroscience · doi:10.1523/jneurosci.18-01-00070.1998 · Cited by 283 · see citing works
MicroRNAs acting in a double-negative feedback loop to control a neuronal cell fate decision
Johnston, R. J., Chang, S., Etchberger, J. F., Ortiz, C. O., & Hobert, O. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0505530102 · Cited by 276 · see citing works
The Cyclic GMP-Dependent Protein Kinase EGL-4 Regulates Olfactory Adaptation in C. elegans
L’Étoile, N. D., Coburn, C. M., Eastham, J., Kistler, A. L., Gallegos, G., & Bargmann, C. I. (2002) · Neuron · doi:10.1016/s0896-6273(02)01066-8 · Cited by 202 · see citing works
Drosophila hygrosensation requires the TRP channels water witch and nanchung
Liu, L., Li, Y., Wang, R., Yin, C., Dong, Q., Hing, H. K., Kim, C., & Welsh, M. J. (2007) · Nature · doi:10.1038/nature06223 · Cited by 200 · see citing works
The homeobox gene lim-6 is required for distinct chemosensory representations in C. elegans
Pierce-Shimomura, J. T., Faumont, S., Gaston, M. R., Pearson, B. J., & Lockery, S. R. (2001) · Nature · doi:10.1038/35070575 · Cited by 193 · see citing works
Self-citationStep-Response Analysis of Chemotaxis inCaenorhabditis elegans
Miller, A. C., Thiele, T. R., Faumont, S., Moravec, M. L., & Lockery, S. R. (2005) · Journal of Neuroscience · doi:10.1523/jneurosci.5133-04.2005 · Cited by 105 · see citing works
Self-citationDaniels, S. A., Ailion, M., Thomas, J. H., & Sengupta, P. (2000) · Genetics · doi:10.1093/genetics/156.1.123 · Cited by 105 · see citing works
Cyclic GMP-dependent protein kinase EGL-4 controls body size and lifespan inC. elegans
Hirose, T., Nakano, Y., Nagamatsu, Y., Misumi, T., Ohta, H., & Ohshima, Y. (2003) · Development · doi:10.1242/dev.00330 · Cited by 101 · see citing works
Inhibition of lobster olfactory receptor cells by an odor-activated potassium conductance
Michel, W. C., McClintock, T. S., & Ache, B. W. (1991) · Journal of Neurophysiology · doi:10.1152/jn.1991.65.3.446 · Cited by 88 · see citing works
Responses of the nematodeCaenorhabditis elegans to controlled chemical stimulation
Dusenbery, D. B. (1980) · Journal of Comparative Physiology A · doi:10.1007/bf00657352 · Cited by 81 · see citing works
Response properties of rat olfactory bulb neurones
Mair, R. G. (1982) · The Journal of Physiology · doi:10.1113/jphysiol.1982.sp014197 · Cited by 57 · see citing works
‘On’- and ‘Off’- Responses of the Olfactory Epithelium
Takagi, S., & SHIBUYA, T. (1959) · Nature · doi:10.1038/184060a0 · Cited by 39 · see citing works
Chemosensory behavior of semi-restrainedCaenorhabditis elegans
Faumont, S., Miller, A. C., & Lockery, S. R. (2005) · Journal of Neurobiology · doi:10.1002/neu.20196 · Cited by 30 · see citing works
Self-citationHinterwirth, A. J., Zeiner, R., & Tichy, H. (2004) · European Journal of Neuroscience · doi:10.1111/j.0953-816x.2004.03386.x · Cited by 23 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Brain Lateralization: A Comparative Perspective.
Güntürkün, O., Ströckens, F., & Ocklenburg, S. (2020) · Physiological Reviews · doi:10.1152/physrev.00006.2019 · Cited by 412 · see citing works
A hub-and-spoke circuit drives pheromone attraction and social behaviour in C. elegans
Macosko, E. Z., Pokala, N., Feinberg, E. H., Chalasani, S. H., Butcher, R. A., Clardy, J., & Bargmann, C. I. (2009) · Nature · doi:10.1038/nature07886 · Cited by 475 · see citing works
Left–right asymmetries of behaviour and nervous system in invertebrates
Frasnelli, E., Vallortígara, G., & Rogers, L. J. (2012) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2012.02.006 · Cited by 340 · see citing works
NeuroPAL: A Multicolor Atlas for Whole-Brain Neuronal Identification in C. elegans
Yemini, E., Lin, A., Nejatbakhsh, A., Varol, E., Sun, R., Mena, G. E., Samuel, A. D. T., Paninski, L., Venkatachalam, V., & Hobert, O. (2020) · Cell · doi:10.1016/j.cell.2020.12.012 · Cited by 311 · see citing works
Neurons Detect Increases and Decreases in Oxygen Levels Using Distinct Guanylate Cyclases
Zimmer, M., Gray, J. M., Pokala, N., Chang, A. J., Karow, D. S., Marletta, M. A., Hudson, M. L., Morton, D. B., Chronis, N., & Bargmann, C. I. (2009) · Neuron · doi:10.1016/j.neuron.2009.02.013 · Cited by 285 · see citing works
Parallel Use of Two Behavioral Mechanisms for Chemotaxis in <i>Caenorhabditis elegans</i>
Iino, Y., & Yoshida, K. (2009) · The Journal of Neuroscience · doi:10.1523/jneurosci.3633-08.2009 · Cited by 264 · see citing works
Regulation of Terminal Differentiation Programs in the Nervous System
Hobert, O. (2011) · Annual Review of Cell and Developmental Biology · doi:10.1146/annurev-cellbio-092910-154226 · Cited by 198 · see citing works
Dynamic Encoding of Perception, Memory, and Movement in a C. elegans Chemotaxis Circuit
Luo, L., Wen, Q., Ren, J., Hendricks, M., Gershow, M. H., Qin, Y., Greenwood, J. S. F., Soucy, E. R., Klein, M., Smith, H. K., et al. (2014) · Neuron · doi:10.1016/j.neuron.2014.05.010 · Cited by 164 · see citing works
Kunitomo, H., Sato, H., Iwata, R. L., Satoh, Y., Ohno, H., Yamada, K., & Iino, Y. (2013) · Nature Communications · doi:10.1038/ncomms3210 · Cited by 152 · see citing works
Encoding asymmetry within neural circuits
Concha, M. L., Bianco, I. H., & Wilson, S. W. (2012) · Nature reviews. Neuroscience · doi:10.1038/nrn3371 · Cited by 150 · see citing works
tmc-1 encodes a sodium-sensitive channel required for salt chemosensation in C. elegans
Chatzigeorgiou, M., Bang, S., Hwang, S. W., & Schafer, W. R. (2013) · Nature · doi:10.1038/nature11845 · Cited by 144 · see citing works
Self-citationA Circuit for Gradient Climbing in C. elegans Chemotaxis
Larsch, J., Flavell, S. W., Liu, Q., Gordus, A. G., Albrecht, D. R., & Bargmann, C. I. (2015) · Cell Reports · doi:10.1016/j.celrep.2015.08.032 · Cited by 135 · see citing works
Olsen, S. R., & Wilson, R. I. (2008) · Trends in Neurosciences · doi:10.1016/j.tins.2008.07.006 · Cited by 138 · see citing works
Chemosensory signal transduction in Caenorhabditis elegans
Ferkey, D. M., Sengupta, P., & L’Étoile, N. D. (2021) · Genetics · doi:10.1093/genetics/iyab004 · Cited by 133 · see citing works
Bretscher, A. J., Kodama, E., Busch, K. E., Murphy, R. J., Soltész, Z., Laurent, P., & de Bono, M. (2011) · Neuron · doi:10.1016/j.neuron.2011.02.023 · Cited by 135 · see citing works
Tsunozaki, M., Chalasani, S. H., & Bargmann, C. I. (2008) · Neuron · doi:10.1016/j.neuron.2008.07.038 · Cited by 134 · see citing works
Temporal Responses of C. elegans Chemosensory Neurons Are Preserved in Behavioral Dynamics
Kato, S., Xu, Y., Cho, C. E., Abbott, L. F., & Bargmann, C. I. (2014) · Neuron · doi:10.1016/j.neuron.2013.11.020 · Cited by 127 · see citing works
Tonic signaling from O2 sensors sets neural circuit activity and behavioral state
Busch, K. E., Laurent, P., Soltész, Z., Murphy, R. J., Faivre, O., Hedwig, B., Thomas, M. V., Smith, H., & de Bono, M. (2012) · Nature Neuroscience · doi:10.1038/nn.3061 · Cited by 118 · see citing works
Evolution of central neural circuits: state of the art and perspectives
Roberts, R. J. V., Pop, S., & Prieto-Godino, L. L. (2022) · Nature reviews. Neuroscience · doi:10.1038/s41583-022-00644-y · Cited by 108 · see citing works
Shinkai, Y., Yamamoto, Y., Fujiwara, M., Tabata, T., Murayama, T., Hirotsu, T., Ikeda, D. D., Tsunozaki, M., Iino, Y., Bargmann, C. I., et al. (2011) · Journal of Neuroscience · doi:10.1523/jneurosci.4691-10.2011 · Cited by 114 · see citing works
Ortiz, C. O., Faumont, S., Takayama, J., Ahmed, H. K., Goldsmith, A. D., Pocock, R., McCormick, K. E., Kunimoto, H., Iino, Y., Lockery, S. R., et al. (2009) · Current Biology · doi:10.1016/j.cub.2009.05.043 · Cited by 113 · see citing works
Self-citationRoberts, W. M., Augustine, S. B., Lawton, K. J., Lindsay, T. H., Thiele, T. R., Izquierdo, E. J., Faumont, S., Lindsay, R. A., Britton, M. C., Pokala, N., et al. (2016) · eLife · doi:10.7554/elife.12572 · Cited by 110 · see citing works
Self-citationCaenorhabditis elegans: a model system for systems neuroscience
Sengupta, P., & Samuel, A. D. T. (2009) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2009.09.009 · Cited by 109 · see citing works
Behavioral plasticity, learning, and memory in C. elegans
Sasakura, H., & Mori, I. (2012) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2012.09.005 · Cited by 108 · see citing works
Dynamical feature extraction at the sensory periphery guides chemotaxis
Schulze, A., Gómez-Marín, À., Rajendran, V. G., Lott, G. K., Musy, M., Ahammad, P., Deogade, A., Sharpe, J. A., Riedl, J., Jarriault, D., et al. (2015) · eLife · doi:10.7554/elife.06694 · Cited by 98 · see citing works
Hierarchical sparse coding in the sensory system of Caenorhabditis elegans
Zaslaver, A., Liani, I., Shtangel, O., Ginzburg, S., Yee, L., & Sternberg, P. W. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1423656112 · Cited by 104 · see citing works
A Self-Regulating Feed-Forward Circuit Controlling C. elegans Egg-Laying Behavior
Zhang, M., Chung, S., Fang-Yen, C. M., Craig, C., Kerr, R. A., Suzuki, H., Samuel, A. D. T., Mazur, E., & Schafer, W. R. (2008) · Current Biology · doi:10.1016/j.cub.2008.08.047 · Cited by 103 · see citing works
Self-citationOranth, A., Schultheis, C., Tolstenkov, O. O., Erbguth, K., Nagpal, J. K., Hain, D., Brauner, M., Wabnig, S., Costa, W. S., McWhirter, R. D., et al. (2018) · Neuron · doi:10.1016/j.neuron.2018.10.024 · Cited by 102 · see citing works
Computations underlying Drosophila photo-taxis, odor-taxis, and multi-sensory integration
Gepner, R., Skanata, M. M., Bernat, N. M., Kaplow, M., & Gershow, M. H. (2015) · eLife · doi:10.7554/elife.06229 · Cited by 94 · see citing works
Neuropeptide signaling remodels chemosensory circuit composition in Caenorhabditis elegans
Leinwand, S. G., & Chalasani, S. H. (2013) · Nature Neuroscience · doi:10.1038/nn.3511 · Cited by 99 · see citing works
A Cold-Sensing Receptor Encoded by a Glutamate Receptor Gene
Gong, J., Liu, J., Ronan, E. A., He, F., Cai, W., Fatima, M., Zhang, W., Lee, H. K., Li, Z., Kim, G.-H., et al. (2019) · Cell · doi:10.1016/j.cell.2019.07.034 · Cited by 92 · see citing works
Evolution and Analysis of Minimal Neural Circuits for Klinotaxis in <i>Caenorhabditis elegans</i>
Izquierdo, E. J., & Lockery, S. R. (2010) · The Journal of Neuroscience · doi:10.1523/jneurosci.2606-10.2010 · Cited by 95 · see citing works
Self-citationRole of synaptic phosphatidylinositol 3-kinase in a behavioral learning response in C. elegans
Ohno, H., Kato, S., Naito, Y., Kunitomo, H., Tomioka, M., & Iino, Y. (2014) · Science · doi:10.1126/science.1250709 · Cited by 95 · see citing works
Oda, S., Tomioka, M., & Iino, Y. (2011) · Journal of Neurophysiology · doi:10.1152/jn.01029.2010 · Cited by 92 · see citing works
Connecting a Connectome to Behavior: An Ensemble of Neuroanatomical Models of C. elegans Klinotaxis
Izquierdo, E. J., & Beer, R. D. (2013) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1002890 · Cited by 84 · see citing works
“Studies have shown that chemotaxis to sodium and chloride ions are mediated mainly by the ASE sensory neurons [68].”
MethodResultInfluentialMultisensory integration in C. elegans
Ghosh, D. D., Nitabach, M. N., Zhang, Y., & Harris, G. P. (2017) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2017.01.005 · Cited by 90 · see citing works
Adachi, T., Kunitomo, H., Tomioka, M., Ohno, H., Okochi, Y., Mori, I., & Iino, Y. (2010) · Genetics · doi:10.1534/genetics.110.119768 · Cited by 87 · see citing works
Hobert, O. (2014) · genesis · doi:10.1002/dvg.22747 · Cited by 85 · see citing works
Neuronal microcircuits for decision making in C. elegans
Faumont, S., Lindsay, T. H., & Lockery, S. (2012) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2012.05.005 · Cited by 85 · see citing works
Self-citationThe computational worm: spatial orientation and its neuronal basis in C. elegans
Lockery, S. R. (2011) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2011.06.009 · Cited by 78 · see citing works
Self-citationMonoamines and neuropeptides interact to inhibit aversive behaviour in Caenorhabditis elegans
Mills, H., Wragg, R. T., Hapiak, V., Castelletto, M. L., Zahratka, J. A., Harris, G. P., Summers, P., Korchnak, A. C., Law, W., Bamber, B. A., et al. (2011) · The EMBO Journal · doi:10.1038/emboj.2011.422 · Cited by 81 · see citing works
The quest for action potentials in C. elegans neurons hits a plateau
Lockery, S. R., & Goodman, M. B. (2009) · Nature Neuroscience · doi:10.1038/nn0409-377 · Cited by 81 · see citing works
Self-citationAccurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space
Toyoshima, Y., Tokunaga, T., Hirose, O., Kanamori, M., Teramoto, T., Jang, M., Kuge, S., Ishihara, T., Yoshida, R., & Iino, Y. (2016) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1004970 · Cited by 79 · see citing works
Evolution of neuronal anatomy and circuitry in two highly divergent nematode species
Hong, R. L., Riebesell, M., Bumbarger, D. J., Cook, S. J., Carstensen, H. R., Sarpolaki, T., Cochella, L., Castrejon, J., Moreno, E., Sieriebriennikov, B., et al. (2019) · eLife · doi:10.7554/elife.47155 · Cited by 78 · see citing works
A neural circuit for flexible control of persistent behavioral states
Ji, N., Madan, G. K., Fabre, G. I., Dayan, A., Baker, C. M., Kramer, T. S., Nwabudike, I., & Flavell, S. W. (2021) · eLife · doi:10.7554/elife.62889 · Cited by 71 · see citing works
Cis-regulatory mechanisms of left/right asymmetric neuron-subtype specification in C. elegans
Etchberger, J. F., Flowers, E. B., Poole, R. J., Bashllari, E., & Hobert, O. (2008) · Development · doi:10.1242/dev.030064 · Cited by 76 · see citing works
Oxidation of a potassium channel causes progressive sensory function loss during aging
Cai, S., & Sesti, F. (2009) · Nature Neuroscience · doi:10.1038/nn.2291 · Cited by 72 · see citing works
Rewiring neural circuits by the insertion of ectopic electrical synapses in transgenic C. elegans
Rabinowitch, I., Chatzigeorgiou, M., Zhao, B., Treinin, M., & Schafer, W. R. (2014) · Nature Communications · doi:10.1038/ncomms5442 · Cited by 63 · see citing works
Self-citationNematode locomotion: dissecting the neuronal–environmental loop
Cohen, N., & Sanders, T. (2014) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2013.12.003 · Cited by 63 · see citing works
Takeuchi, Y., Hori, M., Myint, O., & Kohda, M. (2009) · Behavioural Brain Research · doi:10.1016/j.bbr.2009.11.021 · Cited by 61 · see citing works
Functional imaging and quantification of multineuronal olfactory responses in C. elegans
Lin, A., Qin, S., Casademunt, H., Wu, M., Hung, W., Cain, G., Tan, N. Z., Valenzuela, R., Lesanpezeshki, L., Venkatachalam, V., et al. (2023) · Science Advances · doi:10.1126/sciadv.ade1249 · Cited by 60 · see citing works
Disruption of Epithalamic Left–Right Asymmetry Increases Anxiety in Zebrafish
Facchin, L., Duboué, E. R., & Halpern, M. E. (2015) · Journal of Neuroscience · doi:10.1523/jneurosci.2593-15.2015 · Cited by 58 · see citing works
Thiele, T. R., Faumont, S., & Lockery, S. R. (2009) · Journal of Neuroscience · doi:10.1523/jneurosci.0594-09.2009 · Cited by 57 · see citing works
Self-citationMultimodal sensory processing in Caenorhabditis elegans
Metaxakis, A., Petratou, D., & Tavernarakis, N. (2018) · Open Biology · doi:10.1098/rsob.180049 · Cited by 58 · see citing works
Fenk, L. A., & de Bono, M. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1423808112 · Cited by 55 · see citing works
Concerted pulsatile and graded neural dynamics enables efficient chemotaxis in C. elegans
Itskovits, E., Ruach, R., Kazakov, A., & Zaslaver, A. (2018) · Nature Communications · doi:10.1038/s41467-018-05151-2 · Cited by 55 · see citing works
Projection neurons in Drosophila antennal lobes signal the acceleration of odor concentrations
Kim, A. J., Lazar, A. A., & Slutskiy, Y. B. (2015) · eLife · doi:10.7554/elife.06651 · Cited by 54 · see citing works
Investigating the molecular mechanisms of learning and memory using Caenorhabditis elegans
Rahmani, A., & Chew, Y. L. (2021) · Journal of Neurochemistry · doi:10.1111/jnc.15510 · Cited by 52 · see citing works
Transcription factor autoregulation is required for acquisition and maintenance of neuronal identity
Leyva‐Díaz, E., & Hobert, O. (2019) · Development · doi:10.1242/dev.177378 · Cited by 52 · see citing works
Leinwand, S. G., Yang, C. J., Bazopoulou, D., Chronis, N., Srinivasan, J., & Chalasani, S. H. (2015) · eLife · doi:10.7554/elife.10181 · Cited by 52 · see citing works
Watteyne, J., Peymen, K., der Auwera, P. V., Borghgraef, C., Vandewyer, E., Damme, S. V., Rutten, I., Lammertyn, J., Jelier, R., Schoofs, L., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-15964-9 · Cited by 52 · see citing works
Notch-Dependent Induction of Left/Right Asymmetry in C. elegans Interneurons and Motoneurons
Bertrand, V., Bisso, P. W., Poole, R. J., & Hobert, O. (2011) · Current Biology · doi:10.1016/j.cub.2011.06.016 · Cited by 51 · see citing works
Narayan, A., Venkatachalam, V., Durak, O., Reilly, D. K., Bose, N., Schroeder, F. C., Samuel, A. D. T., Srinivasan, J., & Sternberg, P. W. (2016) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1600786113 · Cited by 51 · see citing works
GABAergic motor neurons bias locomotor decision-making in C. elegans
Liu, P., Chen, B., & Wang, Z. (2020) · Nature Communications · doi:10.1038/s41467-020-18893-9 · Cited by 47 · see citing works
Manns, M., & Güntürkün, O. (2009) · Experimental Brain Research · doi:10.1007/s00221-009-1702-z · Cited by 45 · see citing works
Illuminating neural circuits and behaviour in Caenorhabditis elegans with optogenetics
Fang-Yen, C. M., Alkema, M. J., & Samuel, A. D. T. (2015) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2014.0212 · Cited by 49 · see citing works
McLachlan, I. G., Kramer, T. S., Dua, M., DiLoreto, E. M., Gomes, M. A., Dag, U., Srinivasan, J., & Flavell, S. W. (2022) · eLife · doi:10.7554/elife.79557 · Cited by 47 · see citing works
Satoh, Y., Sato, H., Kunitomo, H., Fei, X., Hashimoto, K., & Iino, Y. (2014) · Journal of Neuroscience · doi:10.1523/jneurosci.1757-14.2014 · Cited by 45 · see citing works
Sarin, S., Antonio, C., Tursun, B., & Hobert, O. (2009) · Development · doi:10.1242/dev.040204 · Cited by 44 · see citing works
Taylor, R. W., Hsieh, Y., Gamse, J. T., & Chuang, C. (2010) · Development · doi:10.1242/dev.038695 · Cited by 43 · see citing works
Strategies for automated analysis of C. elegans locomotion
Buckingham, S. D., & Sattelle, D. B. (2008) · Invertebrate Neuroscience · doi:10.1007/s10158-008-0077-3 · Cited by 41 · see citing works
Tsukada, Y., Yamao, M., Naoki, H., Shimowada, T., Ohnishi, N., Kuhara, A., Ishii, S., & Mori, I. (2016) · Journal of Neuroscience · doi:10.1523/jneurosci.2837-15.2016 · Cited by 40 · see citing works
Combinatorial Action of Temporally Segregated Transcription Factors
Charest, J., Daniele, T., Wang, J., Bykov, A., Mandlbauer, A., Asparuhova, M., Roehsner, J., Gutiérrez‐Pérez, P., & Cochella, L. (2020) · Developmental Cell · doi:10.1016/j.devcel.2020.09.002 · Cited by 37 · see citing works
Sato, H., Kunitomo, H., Fei, X., Hashimoto, K., & Iino, Y. (2021) · Cell Reports · doi:10.1016/j.celrep.2021.109177 · Cited by 39 · see citing works
Bhardwaj, A., Thapliyal, S., Dahiya, Y., & Babu, K. (2018) · Journal of Neuroscience · doi:10.1523/jneurosci.1955-17.2018 · Cited by 39 · see citing works
Wang, L., Sato, H., Satoh, Y., Tomioka, M., Kunitomo, H., & Iino, Y. (2017) · The Journal of Neuroscience · doi:10.1523/jneurosci.1774-16.2017 · Cited by 37 · see citing works
Loss of CaMKI Function Disrupts Salt Aversive Learning in C. elegans
Lim, J. P., Fehlauer, H., Das, A., Sarò, G., Glauser, D. A., Brunet, A., & Goodman, M. B. (2018) · Journal of Neuroscience · doi:10.1523/jneurosci.1611-17.2018 · Cited by 37 · see citing works
An Adaptive-Threshold Mechanism for Odor Sensation and Animal Navigation
Levy, S., & Bargmann, C. I. (2019) · Neuron · doi:10.1016/j.neuron.2019.10.034 · Cited by 37 · see citing works
A model of chemotaxis and associative learning in C. elegans
Appleby, P. A. (2012) · Biological Cybernetics · doi:10.1007/s00422-012-0504-8 · Cited by 36 · see citing works
Tomida, T., Oda, S., Takekawa, M., Iino, Y., & Saito, H. (2012) · Science Signaling · doi:10.1126/scisignal.2002983 · Cited by 36 · see citing works
Single-cell transcriptional analysis of taste sensory neuron pair in Caenorhabditis elegans
Takayama, J., Faumont, S., Kunitomo, H., Lockery, S. R., & Iino, Y. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp868 · Cited by 35 · see citing works
Self-citationInformation Flow through a Model of the C. elegans Klinotaxis Circuit
Izquierdo, E. J., Williams, P. L., & Beer, R. D. (2015) · PLoS ONE · doi:10.1371/journal.pone.0140397 · Cited by 35 · see citing works
Gated Molecular Transport in Highly Ordered Heterogeneous Nanochannel Array Electrode
Lin, X., Yang, Q., Yan, F., Zhang, B., & Su, B. (2016) · ACS Applied Materials & Interfaces · doi:10.1021/acsami.6b13772 · Cited by 35 · see citing works
Tanimoto, Y., Zheng, Y. G., Fei, X., Fujie, Y., Hashimoto, K., & Kimura, K. D. (2016) · Scientific Reports · doi:10.1038/srep26297 · Cited by 36 · see citing works
Lateralization of Sucrose Responsiveness and Non-associative Learning in Honeybees
Baracchi, D., Rigosi, E., Sanchez, M. G. D. B., & Giurfa, M. (2018) · Frontiers in Psychology · doi:10.3389/fpsyg.2018.00425 · Cited by 34 · see citing works
Davis, L., Radman, I., Goutou, A., Tynan, A. C., Baxter, K., Xi, Z., O’Shea, J. M., Chin, J. W., & Greiss, S. (2021) · eLife · doi:10.7554/elife.67075 · Cited by 34 · see citing works
Smith, H. K., Luo, L., O’Halloran, D. M., Guo, D., Huang, X., Samuel, A. D. T., & Hobert, O. (2013) · Genetics · doi:10.1534/genetics.113.152660 · Cited by 34 · see citing works
The Caenorhabditis elegans interneuron ALA is (also) a high-threshold mechanosensor
Sanders, J., Nagy, S., Fetterman, G. C., Wright, C. S., Treinin, M., & Biron, D. (2013) · BMC Neuroscience · doi:10.1186/1471-2202-14-156 · Cited by 34 · see citing works
Wang, Y., D’Urso, G., & Bianchi, L. K. (2011) · Journal of Neurophysiology · doi:10.1152/jn.00299.2011 · Cited by 34 · see citing works
Heuristics, Descriptions, and the Scope of Mechanistic Explanation
Zednik, C. (2015) · History, philosophy and theory of the life sciences · doi:10.1007/978-94-017-9822-8_13 · Cited by 33 · see citing works
Multiple Sensory Inputs Are Extensively Integrated to Modulate Nociception in C. elegans
Summers, P. J., Layne, R. M., Ortega, A., Harris, G. P., Bamber, B. A., & Komuniecki, R. W. (2015) · Journal of Neuroscience · doi:10.1523/jneurosci.0225-15.2015 · Cited by 33 · see citing works
Sperm as microswimmers – navigation and sensing at the physical limit
Kaupp, U. B., & Alvarez, L. (2016) · The European Physical Journal Special Topics · doi:10.1140/epjst/e2016-60097-1 · Cited by 34 · see citing works
Nakano, S., Ikeda, M., Tsukada, Y., Fei, X., Suzuki, T., Niino, Y., Ahluwalia, R., Sano, A., Kondo, R., Ihara, K., et al. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1909240117 · Cited by 31 · see citing works
Sensory systems: their impact on C. elegans survival
Allen, E., Ren, J. H., Zhang, Y., & Alcedo, J. (2014) · Neuroscience · doi:10.1016/j.neuroscience.2014.06.054 · Cited by 34 · see citing works
Komuniecki, R. W., Harris, G. P., Hapiak, V., Wragg, R. T., & Bamber, B. A. (2011) · Invertebrate Neuroscience · doi:10.1007/s10158-011-0127-0 · Cited by 31 · see citing works
Serotonin differentially modulates Ca2+ transients and depolarization in a C. elegans nociceptor
Zahratka, J. A., Williams, P., Summers, P. J., Komuniecki, R. W., & Bamber, B. A. (2014) · Journal of Neurophysiology · doi:10.1152/jn.00665.2014 · Cited by 31 · see citing works
Kuramochi, M., & Doi, M. (2017) · PLoS ONE · doi:10.1371/journal.pone.0168415 · Cited by 28 · see citing works
Principles for coding associative memories in a compact neural network
Pritz, C. O., Itskovits, E., Bokman, E., Ruach, R., Gritsenko, V., Nelken, T., Menasherof, M., Azulay, A., & Zaslaver, A. (2023) · eLife · doi:10.7554/elife.74434 · Cited by 27 · see citing works
Ohno, H., Sakai, N., Adachi, T., & Iino, Y. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.08.038 · Cited by 27 · see citing works
Woldemariam, S. R., Nagpal, J. K., Hill, T. J., Li, J., Schneider, M., Shankar, R., Futey, M., Varshney, A., Ali, N., Mitchell, J., et al. (2019) · Genetics · doi:10.1534/genetics.119.302392 · Cited by 27 · see citing works
- Authors
- Suzuki, H., Thiele, T. R., Faumont, S., Ezcurra, M., Lockery, S. R., & Schafer, W. R.
- Affiliations
- University of California San Diego (US)
- University of Oregon (US)
- MRC Laboratory of Molecular Biology (GB)
- Corresponding author
- Lockery, Shawn R.
- Venue
- Nature
- Published
- 2008-07
- Volume
- 454
- Issue
- 7200
- Pages
- 114-117
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC2984562
- OpenAlex
- W2003026101
- Semantic Scholar
- 3c75c57d74fd5e24be78ea6c1d61e14ec4c6194f
- Cited by
- 256
- References
- 31
- Citations by year
- 2026: 10 · 2025: 25 · 2024: 15 · 2023: 10 · 2022: 10 · 2021: 16 · 2020: 11 · 2019: 10 · 2018: 14 · 2017: 12 · 2016: 12 · 2015: 22 · 2014: 13 · 2013: 14 · 2012: 10
- FWCI
- 7.35
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- National Institute of Mental Health (R21MH112105, MH051383, R29MH051383, R01MH051383)
- National Institute on Drug Abuse (R01DA016445, DA016445)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neurobiology and Insect Physiology Research
- Life Sciences › Neuroscience › Sensory Systems › Ion Channels and Receptors
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
- Keywords
- Caenorhabditis elegans, chemotaxis, salty taste, ASER, forward locomotion, turning behavior, calcium imaging, chemotaxis mutants, bilateral asymmetry, retinal organization
- MeSH terms
- Animals, Bacterial Proteins, Chemoreceptor Cells, Chemotaxis, Mutation, Neurons, Afferent, Sodium Chloride, Synapses, Taste, Signal Transduction, Caenorhabditis elegans
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review