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Resolving complex tandem repeats with long reads

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Going Forward with Genetics

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Genetic loci and metabolic states associated with murine epigenetic aging

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Next-generation sequencing of experimental mouse strains

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Deconstructing Mus gemischus: advances in understanding ancestry, structure, and variation in the genome of the laboratory mouse

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Conversion of random X-inactivation to imprinted X-inactivation by maternal PRC2

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High-Resolution Genetic Mapping in the Diversity Outbred Mouse Population Identifies <i>Apobec1</i> as a Candidate Gene for Atherosclerosis

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Deleted copy number variation of Hanwoo and Holstein using next generation sequencing at the population level

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The fine-scale architecture of structural variants in 17 mouse genomes

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Epigenetic control of alternative mRNA processing at the imprinted Herc3/Nap1l5 locus

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Mouse endogenous retroviruses can trigger premature transcriptional termination at a distancePreprint

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Comparative Analysis of CNV Calling Algorithms: Literature Survey and a Case Study Using Bovine High-Density SNP Data

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Associations of MYH3 gene copy number variations with transcriptional expression and growth traits in Chinese cattle

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Hnrnph1 Is A Quantitative Trait Gene for Methamphetamine Sensitivity

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Cytosolic Iron-Sulfur Assembly Is Evolutionarily Tuned by a Cancer-Amplified Ubiquitin Ligase

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Epistatic Networks Jointly Influence Phenotypes Related to Metabolic Disease and Gene Expression in Diversity Outbred Mice

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Improving detection of copy-number variation by simultaneous bias correction and read-depth segmentation

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Genome-Wide Association for Fear Conditioning in an Advanced Intercross Mouse Line

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Copy number variation in potato – an asexually propagated autotetraploid species

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Genetic Architecture of Skewed X Inactivation in the Laboratory Mouse

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The optimal mating distance resulting from heterosis and genetic incompatibility

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Immunity-related GTPase induces lipophagy to prevent excess hepatic lipid accumulation

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Copy number variations of MICAL-L2 shaping gene expression contribute to different phenotypes of cattle

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Structural variation during dog domestication: insights from gray wolf and dhole genomes

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Genomic variability in Mexican chicken population using copy number variants

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Defining Genetic Variation in Widely Used Congenic and Backcrossed Mouse Models Reveals Varied Regulation of Genes Important for Immune Responses

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fourSig: a method for determining chromosomal interactions in 4C-Seq data

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Genomic variation in the vomeronasal receptor gene repertoires of inbred mice

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Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing

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Genetic basis of transcriptome differences between the founder strains of the rat HXB/BXH recombinant inbred panel

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Genetic Regulation ofZfp30, CXCL1, and Neutrophilic Inflammation in Murine Lung

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Rapid Identification of Major-Effect Genes Using the Collaborative Cross

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Genetic variation regulates opioid-induced respiratory depression in mice

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The Genetic Architecture of the Genome-Wide Transcriptional Response to ER Stress in the Mouse

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Integrative Genetic Analysis of Allergic Inflammation in the Murine Lung

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SM a SH: a benchmarking toolkit for human genome variant calling

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Meta-analysis of transcriptomic datasets identifies genes enriched in the mammalian circadian pacemaker

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Impact of Genetic Variation on CRISPR-Cas Targeting

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Facilitating Complex Trait Analysis via Reduced Complexity Crosses

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Endogenous retroviruses in mammals: An emerging picture of how ERVs modify expression of adjacent genes

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Development of SNP markers for C57BL/6N-derived mouse inbred strains

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Structural Variation-Associated Expression Changes Are Paralleled by Chromatin Architecture Modifications

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Genome‐wide association for methamphetamine sensitivity in an advanced intercross mouse line

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Genetic background influences susceptibility to chemotherapy-induced hematotoxicity

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Mouse genomic variation and its effect on phenotypes and gene regulation.

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Genetic and haplotype diversity among wild derived mouse inbred strains. Genome Res

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A Murine Database of Structural Variants Enables the Genetic Architecture of a Spontaneous Murine Lymphoma to be CharacterizedPreprint

Ren, W., Fang, Z., Dolzhenko, E., Saunders, C. T., Cheng, Z., Popic, V., & Peltz, G. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.01.09.632219 · Cited by 1 · see citing works

Resolution of structural variation in diverse mouse genomes reveals chromatin remodeling due to transposable elements

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The Mouse Genomes Project: a repository of inbred laboratory mouse strain genomes

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