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Reciprocal interactions of the intestinal microbiota and immune system
Open accessAbstract
The emergence of the adaptive immune system in vertebrates set the stage for evolution of an advanced symbiotic relationship with the intestinal microbiota. The defining features of specificity and memory that characterize adaptive immunity have afforded vertebrates the mechanisms for efficiently tailoring immune responses to diverse types of microbes, whether to promote mutualism or host defence. These same attributes can put the host at risk of immune-mediated diseases that are increasingly linked to the intestinal microbiota. Understanding how the adaptive immune system copes with the remarkable number and diversity of microbes that colonize the digestive tract, and how the system integrates with more primitive innate immune mechanisms to maintain immune homeostasis, holds considerable promise for new approaches to modulate immune networks to treat and prevent disease.
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“This is of particular importance in intestinal tissues, which are enriched in both Th17 and Treg cells and are subject to ongoing antigenic stimulation from the intestinal microbiome (70).”
From T H 17 cells require ongoing classic IL-6 receptor signaling to retain transcriptional and functional identity (2020) · cites this paper as [70]
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“Ecological conditions vary immensely along both the length of the GI tract as well as in cross-section from lumen to the mucosal brush-border[173,267,308,309].”
From Enterosalivary nitrate metabolism and the microbiome: Intersection of microbial metabolism, nitric oxide and diet in cardiac and pulmonary vascular health (2017) · cites this paper as [308]
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Cites
A human gut microbial gene catalogue established by metagenomic sequencing
MetaHIT Consortium, Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K. S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., et al. (2010) · Nature · doi:10.1038/nature08821 · Cited by 11,624
Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn's disease
Hugot, J.-P., Chamaillard, M., Zouali, H., Lesage, S., Cézard, J.-P., Belaiche, J., Almer, S., Tysk, C., O'Morain, C. A., Gassull, M., et al. (2001) · Nature · doi:10.1038/35079107 · Cited by 5,591
A frameshift mutation in NOD2 associated with susceptibility to Crohn's disease
Ogura, Y., Bonen, D. K., Inohara, N., Nicolae, D. L., Chen, F. F., Ramos, R., Britton, H., Moran, T., Karaliuskas, R., Duerr, R. H., et al. (2001) · Nature · doi:10.1038/35079114 · Cited by 5,030
Dominguez-Bello, M. G., Costello, E. K., Contreras, M., Magris, M., Hidalgo, G., Fierer, N., & Knight, R. (2010) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1002601107 · Cited by 4,774
Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria
Ivanov, I. I., Atarashi, K., Manel, N., Brodie, E. L., Shima, T., Karaoz, U., Wei, D., Goldfarb, K. C., Santee, C. A., Lynch, S. V., et al. (2009) · Cell · doi:10.1016/j.cell.2009.09.033 · Cited by 4,554
Recognition of Commensal Microflora by Toll-Like Receptors Is Required for Intestinal Homeostasis
Rakoff-Nahoum, S., Paglino, J., Eslami-Varzaneh, F., Edberg, S., & Medzhitov, R. (2004) · Cell · doi:10.1016/j.cell.2004.07.002 · Cited by 4,251
Interleukin-10-deficient mice develop chronic enterocolitis
Kühn, R., Löhler, J., Rennick, D. M., Rajewsky, K., & Müller, W. (1993) · Cell · doi:10.1016/0092-8674(93)80068-p · Cited by 4,248
Induction of Colonic Regulatory T Cells by Indigenous Clostridium Species
Atarashi, K., Tanoue, T., Shima, T., Imaoka, A., Kuwahara, T., Momose, Y., Cheng, G., Yamasaki, S., Saito, T., Ohba, Y., et al. (2011) · Science · doi:10.1126/science.1198469 · Cited by 3,752
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
Ley, R. E., Peterson, D. A., & Gordon, J. I. (2006) · Cell · doi:10.1016/j.cell.2006.02.017 · Cited by 3,358
Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43
Maslowski, K. M., Vieira, A. T., Ng, A., Kranich, J., Sierro, F., Yu, D., Schilter, H. C., Rolph, M. S., Mackay, F., Artis, D., et al. (2009) · Nature · doi:10.1038/nature08530 · Cited by 3,241
Cited by
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Items 801–900 of 1,000
Liu, L., Liang, L., Luo, Y., Han, J., Lu, D., Cai, R., Sethi, G., & Mai, S. (2024) · Research · doi:10.34133/research.0529 · Cited by 22
Propionic Acid Impact on Multiple Sclerosis: Evidence and Challenges
Lorefice, L., & Żołędziewska, M. (2024) · Nutrients · doi:10.3390/nu16223887 · Cited by 23
The symbiotic rumen microbiome and cattle performance: a brief review
Bath, C. R., Morrison, M., Ross, E. M., Hayes, B. J., & Cocks, B. (2013) · Animal Production Science · doi:10.1071/an12369 · Cited by 22
Human Microbiome Engineering: The Future and Beyond
Kali, A. (2015) · JOURNAL OF CLINICAL AND DIAGNOSTIC RESEARCH · doi:10.7860/jcdr/2015/14946.6570 · Cited by 20
“flora in infant, at least in the initial months of life [2,23].”
BackgroundInfluentialWang, Q., Fu, W., Guo, Y., Tang, Y., Du, H., Wang, M., Liu, Z., Li, Q., An, L., Tian, J., et al. (2019) · Animals · doi:10.3390/ani9060346 · Cited by 20
“The mammalian gut microbiota plays vital roles in maintaining intestinal homeostasis, resisting the invasion of pathogenic microorganisms, and stimulating the development of the immune system [17,18].”
BackgroundChildhood appendectomy and adult mental disorders: A population‐based cohort study
Ekström, L. D., Ekström, H., Dal, H., Kosidou, K., & Gustafsson, U. O. (2020) · Depression and Anxiety · doi:10.1002/da.23045 · Cited by 20
Finnegan, D., Tocmo, R., & Loscher, C. E. (2023) · Nutrients · doi:10.3390/nu15153371 · Cited by 24
“It is the breach of the intestinal barrier that induces microbe-associated molecular patterns to stimulate intestinal epithelial cells (IECs) and macrophage, and dendritic cells to produce proinflammatory cytokines, such as IL-1, IL-6, IL-12, IL-18, and IL-23, which result in the intestinal cytokine profile associated…”
BackgroundCan we change our microbiome to prevent colorectal cancer development?
Manzat-Saplacan, R. M., Mircea, P. A., Bălăcescu, L., Chira, R. I., Berindan‐Neagoe, I., & Bălăcescu, O. (2015) · Acta Oncologica · doi:10.3109/0284186x.2015.1054949 · Cited by 20
Centanni, M., Turroni, S., Consolandi, C., Rampelli, S., Peano, C., Severgnini, M., Biagi, E., Caredda, G., Bellis, G. D., Brigidi, P., et al. (2013) · PLoS ONE · doi:10.1371/journal.pone.0081762 · Cited by 20
“longum [13,54] - has been shown to exert synergic immune modulatory and protective properties [55,56], allowing the promotion and maintenance of a mutualistic cross-talk between the infant immune system and the mucosa-associated GM fraction [11].”
BackgroundInfluentialEffects of phytochemicals on in vitro anti-inflammatory activity of Bifidobacterium adolescentis
Kawabata, K., Kato, Y., Sakano, T., Baba, N., Hagiwara, K., Tamura, A., Baba, S., Natsume, M., & Ohigashi, H. (2015) · Bioscience Biotechnology and Biochemistry · doi:10.1080/09168451.2015.1006566 · Cited by 20
Celiac Disease—A Complex Disorder
Koehler, P., Wieser, H., & Konitzer, K. (2014) · Elsevier eBooks · doi:10.1016/b978-0-12-420220-7.00001-8 · Cited by 20
Microbiote intestinal et réponses aux thérapies anti-tumorales
Vétizou, M., Daillère, R., & Zitvogel, L. (2016) · médecine/sciences · doi:10.1051/medsci/20163211013 · Cited by 21
Zhao, Q. S., Harbour, S. N., Kolde, R., Latorre, I. J., Tun, H. M., Schoeb, T. R., Turner, H., Moon, J. J., Khafipour, E., Xavier, R. J., et al. (2017) · The Journal of Immunology · doi:10.4049/jimmunol.1700171 · Cited by 19
“increasingly recognized in recent years (2, 3).”
Muñoz, K., Flores-Herrera, P., Gonçalves, A. T., Rojas, C., Yáñez, C., Mercado, L. A., Brokordt, K., & Schmitt, P. (2019) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2019.05.028 · Cited by 24
Han, Y., Zhan, T., Zhao, Q., Tang, C., Zhang, K., Han, Y., & Zhang, J. (2020) · Animal Feed Science and Technology · doi:10.1016/j.anifeedsci.2020.114617 · Cited by 20
Tauschmann, M., Prietl, B., Treiber, G. M., Gorkiewicz, G., Kump, P. K., Högenauer, C., & Pieber, T. R. (2013) · PLoS ONE · doi:10.1371/journal.pone.0080362 · Cited by 20
“These signals from the environment are key to inducing immunological regulatory mechanisms and cooperation with the immune system to maintain intestinal homeostasis [2].”
BackgroundCangiano, L. R., Villot, C., Guan, L. L., Ipharraguerre, I. R., & Steele, M. A. (2023) · Journal of Dairy Science · doi:10.3168/jds.2023-24195 · Cited by 20
Xie, P., Ma, Z., Yang, X., Pan, H., Shen, P., Du, H., Cao, Y., Xiao, J., Xiao, H., & Song, M. (2025) · Critical Reviews in Food Science and Nutrition · doi:10.1080/10408398.2025.2481983 · Cited by 20
“IECs not only possess a physical barrier function but also provide immune surveillance and communicate with the mucosal immune system through cytokine production.”
InfluentialKwa, M. J., Hussey, G. A., Novik, Y., Franke, A. A., Volkova, A., Flores, K., Blaser, M. J., Speyer, J. L., Oratz, R., Meyers, M. I., et al. (2025) · Journal of Cancer Research and Clinical Oncology · doi:10.1007/s00432-025-06338-z · Cited by 21
Li, C., Wang, G., Zhang, Q. Y., Huang, Y., Li, F., & Wang, W. (2022) · Animal Biotechnology · doi:10.1080/10495398.2022.2025817 · Cited by 19
Gut dysbiosis induced by antibiotics is improved by tangerine pith extract in mice
Bian, X., Shi, T., Wang, Y., Ma, Y., Yu, Y., Gao, W., & Guo, C. (2022) · Nutrition Research · doi:10.1016/j.nutres.2022.01.005 · Cited by 19
Álvarez‐Herms, J., González, A., Corbi, F., Odriozola, I., & Odriozola, A. (2023) · AIMS Public Health · doi:10.3934/publichealth.2023049 · Cited by 22
“The normal function of intestinal permeability refers to the ability of the intestinal barrier to selectively allow for the passage of luminal pathogens, toxins, antigens, nutrients, and waterelectrolytes, while maintaining a barrier function against the entry of harmful substances [9].”
BackgroundPal, P., & Shastry, R. P. (2023) · Folia Microbiologica · doi:10.1007/s12223-023-01085-5 · Cited by 18
“…supplying molecular signals, nutrients and various metabolic functions (Rowland et al. 2018), preventing harmful pathogens from colonizing within the body, and thus shaping the event of innate and adaptive immunity of the host (Dethlefsen et al. 2007; Maynard et al. 2012; Lazar et al. 2018).”
BackgroundCao, X., Xu, Y., Zhou, C., Huo, J., Su, S., Liu, L., Zhu, Z., Li, L., Jia, W., Wang, C., et al. (2023) · Advanced Science · doi:10.1002/advs.202302910 · Cited by 18
The second genome: Effects of the mitochondrial genome on cancer progression
Scheid, A. D., Beadnell, T. C., & Welch, D. R. (2019) · Advances in cancer research · doi:10.1016/bs.acr.2019.01.001 · Cited by 21
Marnis, H., Kania, P. W., Syahputra, K., Zuo, S., Dirks, R. P., & Buchmann, K. (2019) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2019.08.034 · Cited by 19
Schmid‐Hempel, P. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.003.0005 · Cited by 19
Inflammasomes in inflammatory bowel disease pathogenesis
Hao, L.-Y., Liu, X., & Franchi, L. (2013) · Current Opinion in Gastroenterology · doi:10.1097/mog.0b013e32836157a4 · Cited by 18
“On one hand, the microbiota plays an essential role in the maturation of the immune system [4] and affects the intensity and type of immune responses elicited by infectious agents [5,6].”
BackgroundSelenomethionine ameliorates LPS-induced intestinal immune dysfunction in chicken jejunum
Cui, Y., Qu, Y., Yin, K., Zhang, X., & Lin, H. (2021) · Metallomics · doi:10.1093/mtomcs/mfab003 · Cited by 18
Enterocyte-Associated Microbiome of the Hadza Hunter-Gatherers
Turroni, S., Rampelli, S., Centanni, M., Schnorr, S. L., Consolandi, C., Severgnini, M., Peano, C., Soverini, M., Falconi, M., Crittenden, A. N., et al. (2016) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.00865 · Cited by 18
The Gut Microbiota and Pediatric Multiple Sclerosis: Recent Findings
Tremlett, H. L., & Waubant, E. L. (2017) · Neurotherapeutics · doi:10.1007/s13311-017-0574-3 · Cited by 18
Stakišaitis, D., Juknevičienė, M., Ulys, A., Žaliūnienė, D., Stanislovaitienė, D., Šepetienė, R., Slavinska, A., Sužiedėlis, K., & Lesauskaitė, V. (2018) · Oncology Letters · doi:10.3892/ol.2018.8749 · Cited by 18
“1) genes control the expression of part of the carbohydrates by the epithelial cells in the respiratory, genitourinary and gastrointestinal systems; the carbohydrate variability acts as a potential receptor for non‑pathogenic and pathogenic microorganisms influencing immune responses (8,9).”
Secretory IgM regulates gut microbiota homeostasis and metabolism
Ding, Y., Fernández-Montero, Á., Mani, A., Casadei, E., Miyazawa, R., Zhou, C., Chaumont, L., Posavi, M., Cole, S. D., Shibasaki, Y., et al. (2025) · Nature Microbiology · doi:10.1038/s41564-025-02013-8 · Cited by 17
“The co-evolution between microbiota and the host adaptive immune system has shaped a conserved and mutualistic relationship in all jawed vertebrates 1 .”
B cells in inflammatory bowel disease
Castillo, F. A., Kern, B. C., & Villablanca, E. J. (2025) · Immunology Letters · doi:10.1016/j.imlet.2025.107071 · Cited by 19
Gut Microbiota in Multiple Sclerosis
Wekerle, H., & Hohlfeld, R. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-801914-6.00009-x · Cited by 17
New Technologies for Monitoring Marine Mammal Health
Mancia, A. (2018) · Elsevier eBooks · doi:10.1016/b978-0-12-812144-3.00011-5 · Cited by 21
“Members of the microbial community can directly influence the progression of a disease and modulate the host’s immune system regulation and response, making the host’s microbial partners essential to immune system function (Maynard et al., 2012).”
BackgroundImmunometabolism in type 2 diabetes mellitus: tissue-specific interactions
Pinheiro-Machado, E., Gurgul-Convey, E., & Marzec, M. (2020) · Archives of Medical Science · doi:10.5114/aoms.2020.92674 · Cited by 19
“On the other hand, during obesity (diet-induced), where the intestinal barrier is known to be more permeable [161], MAMPS stimulate intestinal epithelial cells, macrophages, and dendritic cells to produce pro-inflammatory cytokines [162].”
BackgroundRungue, M., Melo, V., Martins, D., Campos, P. C., Leles, G., Galvão, I., de Almeida, V. M., Aganetti, M. A., Pedersen, A. S. B., Assis, N. R. G., et al. (2021) · PLoS neglected tropical diseases · doi:10.1371/journal.pntd.0009171 · Cited by 17
“Several studies have proposed that the gut microbiota dysregulation is involved in the rupture of the gut epithelium barrier [10,12,34].”
BackgroundNenciarini, S., Amoriello, R., Bacci, G., Cerasuolo, B., Paola, M. D., Nardini, P., Papini, A., Ballerini, C., & Cavalieri, D. (2024) · Scientific Reports · doi:10.1038/s41598-024-51370-7 · Cited by 17
“The activation of DCs after antigen processing leads to differentiation and activation of T-helper (Th) cells by specific CD4 + effectors 15 .”
BackgroundThe Role of Early Life Gut Mycobiome on Child Health
Rodriguez, K. A., Gurung, M., Talatala, R., Rearick, J. R., Ruebel, M. L., Stephens, K., & Yeruva, L. (2024) · Advances in Nutrition · doi:10.1016/j.advnut.2024.100185 · Cited by 17
“[8 – 12].”
Microbial Exposure and Onset of Allergic Diseases - Potential Prevention Strategies?
Pfefferle, P. I., & Renz, H. (2014) · Allergology International · doi:10.2332/allergolint.13-rai-0671 · Cited by 17
Assessing Early Life Factors for Eosinophilic Esophagitis: Lessons From Other Allergic Diseases
Jensen, E. T., & Bertelsen, R. J. (2016) · Current Treatment Options in Gastroenterology · doi:10.1007/s11938-016-0083-1 · Cited by 17
Gut microbiota and its implications in small bowel transplantation
Wang, C., Li, Q., & Li, J. (2018) · Frontiers of Medicine · doi:10.1007/s11684-018-0617-0 · Cited by 17
Undibacterium piscinae sp. nov., isolated from Korean shiner intestine
Lee, S.-Y., Kang, W., Kim, P. S., Kim, H. S., Sung, H., Shin, N., Whon, T. W., Yun, J., Lee, J., Lee, J., et al. (2019) · INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY · doi:10.1099/ijsem.0.003604 · Cited by 17
Chen, T., Li, Y., Liang, J., Li, Y., & Huang, Z. (2020) · Global Ecology and Conservation · doi:10.1016/j.gecco.2020.e00929 · Cited by 18
Xu, H., Cao, J., Li, X., Lu, X., Xia, Y., Fan, D., Zhao, H., Ju, D., & Xiao, C. (2020) · Frontiers in Pharmacology · doi:10.3389/fphar.2020.587534 · Cited by 17
“The gut microbiota plays a pivotal role in the maintenance of immune system homeostasis, particularly the barrier function of the intestinal mucosa, and an imbalanced interaction between the gut microbiota and the host intestinal mucosal immune system can increase the risk of immunemediated inflammatory disease (Mayna…”
BackgroundNutrition-Based Management of Inflammaging in CKD and Renal Replacement Therapies
Losappio, V., Infante, B., Leo, S., Troise, D. E., Calvaruso, M., Vitale, P., Renzi, S., Stallone, G., & Castellano, G. (2021) · Nutrients · doi:10.3390/nu13010267 · Cited by 19
Follicular helper T cell-mediated mucosal barrier maintenance
Winstead, C. J. (2014) · Immunology Letters · doi:10.1016/j.imlet.2014.07.015 · Cited by 17
Mostafavi, A. Z., & Troutman, J. M. (2013) · Biochemistry · doi:10.1021/bi400126w · Cited by 17
“The host of these populations benefit through extraction of nutrients from the end products of bacterial fermentation (2, 4).”
Analysis of cultivable microbiota and diet intake pattern of the long-lived naked mole-rat
Debebe, T., Holtze, S., Morhart, M., Hildebrandt, T. B., Rodewald, S., Huse, K., Platzer, M., Wyohannes, D., Yirga, S., Lemma, A., et al. (2016) · Gut Pathogens · doi:10.1186/s13099-016-0107-3 · Cited by 16
“Early in life, exposure to microbes is known to shape the immune system [45].”
BackgroundChange in gut microbiota for eczema: Implications for novel therapeutic strategies
Kang, Y., Cai, Y., & Pan, W. D. (2017) · Allergologia et Immunopathologia · doi:10.1016/j.aller.2017.05.010 · Cited by 18
Preclinical models for colonic absorption, application to controlled release formulation development
Lozoya-Agulló, I., González‐Álvarez, I., Merino‐Sanjuán, M., Bermejo, M., & González‐Álvarez, M. (2018) · European Journal of Pharmaceutics and Biopharmaceutics · doi:10.1016/j.ejpb.2018.07.008 · Cited by 17
Reshma, K. J., Sumithra, T. G., Nair, A. V., Raju, V. S., Kishor, T. G., Sreenath, K. R., & Sanil, N. K. (2018) · Aquaculture · doi:10.1016/j.aquaculture.2018.08.008 · Cited by 17
“bial community having significant nutritional and physiological interactions among them and with the host (Maynard et al., 2012; Xing et al., 2013).”
BackgroundThe Role of Gut Microbiota in the High-Risk Construct of Severe Mental Disorders: A Mini Review
Sani, G., Manchia, M., Simonetti, A., Janiri, D., Paribello, P., Pinna, F., & Carpiniello, B. (2021) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2020.585769 · Cited by 18
Maiuolo, J., Musolino, V., Gliozzi, M., Carresi, C., Scarano, F., Nucera, S., Scicchitano, M., Oppedisano, F., Bosco, F., Macrì, R., et al. (2022) · Nutrients · doi:10.3390/nu14132711 · Cited by 16
Wan, Y., Huang, M., Xu, X., Cao, X., Chen, H., & Duan, R. (2022) · Environmental Toxicology and Pharmacology · doi:10.1016/j.etap.2022.103926 · Cited by 16
Raj, K., Singh, S., Chib, S., & Mallan, S. (2022) · Current Pharmaceutical Design · doi:10.2174/1381612828666221003112300 · Cited by 16
Structural Characteristics and Immunomodulatory Effects of Melanoidins from Black Garlic
Song, X., Xue, L., Geng, X., Wu, J., Wu, T., & Zhang, M. (2023) · Foods · doi:10.3390/foods12102004 · Cited by 16
“Once affected by external factors, the dynamic balance between the intestinal flora and the host will be destroyed, resulting in flora disorder [40], mainly in its structure and quantity.”
BackgroundSpirulina in fish immunity development: find the black box
Rana, M., Mandal, S., & Kabita, S. (2024) · Reviews in Fish Biology and Fisheries · doi:10.1007/s11160-023-09832-0 · Cited by 19
Fu, Y., Li, E., Casey, T., Johnson, T. A., Adeola, O., & Ajuwon, K. M. (2024) · Journal of Animal Science · doi:10.1093/jas/skae008 · Cited by 16
Xiong, S., Jiang, J., Wan, F., Tan, D., Zheng, H., Xue, H., Hang, Y., Yang, L., & Su, Y. (2024) · Antioxidants · doi:10.3390/antiox13040441 · Cited by 16
“Previous studies have proved that intestinal microbes and metabolites establish strong metabolic/nutritional networks with the host that could inhibit the growth of potential pathogens [5].”
BackgroundExploring the Therapeutic Potential of Flavonoids in the Management of Cancer
Singh, S. K., & Verma, R. (2024) · Current Pharmaceutical Biotechnology · doi:10.2174/0113892010297456240327062614 · Cited by 18
Yi, W., Shi, J., Zhou, W., Wei, J., Sun, Y., Zeng, X., & Wang, W. (2025) · Food Chemistry · doi:10.1016/j.foodchem.2025.143109 · Cited by 16
Intrinsic association between diet and the gut microbiome: current evidence
Fodor, A. A., & Winglee, K. (2015) · Nutrition and Dietary Supplements · doi:10.2147/nds.s62362 · Cited by 16
Li, Y., Guo, S., Hua, T., Wang, Y., Wei, D., Zhao, M., Su, S., & Duan, J. (2018) · Journal of Chromatography B · doi:10.1016/j.jchromb.2018.01.026 · Cited by 16
Current Status and Prospects of Spontaneous Peritonitis in Patients with Cirrhosis
Li, Y., Huang, J., & Peng, M. (2020) · BioMed Research International · doi:10.1155/2020/3743962 · Cited by 17
“The interaction between intestinal flora and mucosal immune system is dynamic and complex [98].”
BackgroundSkillington, O., Mills, S., Gupta, A., Mayer, E. A., Gill, C. I. R., Rio, D. D., O’Riordan, K. J., Cryan, J. F., Ross, R. P., & Stanton, C. (2021) · Nutrition and Healthy Aging · doi:10.3233/nha-210129 · Cited by 18
“[61] Maynard CL, Elson CO, Hatton RD, Weaver CT.”
BackgroundHost-microbiome interaction in Crohn’s disease: A familiar or familial issue?
Michielan, A. (2015) · World Journal of Gastrointestinal Pathophysiology · doi:10.4291/wjgp.v6.i4.159 · Cited by 16
Basic, M., Büettner, M., Keubler, L. M., Smoczek, A., Brüsch, I., Buchheister, S., & Bleich, A. (2018) · Scientific Reports · doi:10.1038/s41598-017-19062-7 · Cited by 16
Development and Function of B Cell Subsets
Vale, A. M., Kearney, J. F., Nóbrega, A., & Schroeder, H. W. (2014) · Elsevier eBooks · doi:10.1016/b978-0-12-397933-9.00007-2 · Cited by 21
Qiu, S., Zhang, W., Yu, Y., Shi, S., Gao, Y., Zhang, T., Zhan, P.-C., Zhang, X., & Liu, J. (2025) · Animal Advances · doi:10.48130/animadv-0025-0026 · Cited by 15
Parois, S. P., Eicher, S. D., Lindemann, S. R., & Marchant, J. N. (2021) · Scientific Reports · doi:10.1038/s41598-021-03565-5 · Cited by 17
Wang, P., Xu, Y., Liu, M., Li, H., Wang, H., Liu, Y., Wang, B., Xia, S., Su, H., Wei, M., et al. (2023) · Frontiers in Pediatrics · doi:10.3389/fped.2023.1063558 · Cited by 15
“It has been shown that the cellular sources of IFN-α may vary during different viral infections and epithelial cells in the gut produce IFN-I in response to mucosal infections caused by different viruses (33, 34).”
BackgroundZhang, Z., Wu, Y., Zhou, S., Fu, P., & Yan, H. G. (2023) · Microorganisms · doi:10.3390/microorganisms11092272 · Cited by 16
“The intricate interaction between the environment, host, and gut microbiota as a reciprocal relationship through co-evolution remains to be explored [57].”
BackgroundCaremoli, F., Huynh, J., Lagishetty, V., Markovic, D., Braun, J. G., Dong, T. S., Jacobs, J. P., & Sternini, C. (2023) · Nutrients · doi:10.3390/nu15194145 · Cited by 15
“The microbiome is important in maintaining energy homeostasis, and alteration of gut microbiome composition or dysbiosis is a major environmental factor in obesity [41,59], which precedes the chronic low grade inflammation and has been regarded as the initial stage of metabolic disorders [47,48,60].”
BackgroundZhang, H., Liu, M., Song, F., Zhu, X., Lu, Q., & Liu, R. (2024) · Food Research International · doi:10.1016/j.foodres.2024.113938 · Cited by 16
New Insights for Febrile Urinary Tract Infection (Acute Pyelonephritis) in Children
Lee, K. (2016) · Journal of the Korean Society of Pediatric Nephrology · doi:10.3339/jkspn.2016.20.2.37 · Cited by 15
Liu, W., Pang, G., Wang, S., & Sun, A. (2017) · Experimental and Therapeutic Medicine · doi:10.3892/etm.2017.4993 · Cited by 15
“Studies have confirmed that the fatality rate associated with bacterial, viral, or fungal infection of the lungs and other organs caused by immunosuppression is as high as 45-90%, and the cause of death is related to excessive systemic inflammation caused by infection (2).”
BackgroundDaillère, R., Routy, B., Goubet, A., Cogdill, A. P., Ferrere, G., Silva, C. A.-C., Fluckiger, A., Ly, P., Haddad, Y., Pizzato, E., et al. (2020) · OncoImmunology · doi:10.1080/2162402x.2020.1794423 · Cited by 16
Yeung, C., Chiau, J. C., Cheng, M.-L., Chan, W., Chang, S., Jiang, C., & Lee, H. (2021) · Gastroenterology Research and Practice · doi:10.1155/2021/3068393 · Cited by 15
Yang, Y. M., Sun, C., Li, F., Shan, A., & Shi, B. (2021) · Electronic Journal of Biotechnology · doi:10.1016/j.ejbt.2021.05.002 · Cited by 15
Intestine Immune Homeostasis After Alcohol and Burn Injury
Li, X., Hammer, A. M., Rendón, J. L., & Choudhry, M. A. (2015) · Shock · doi:10.1097/shk.0000000000000353 · Cited by 15
“IL-22 acts on the intestinal epithelial cells to enhance antimicrobial defense and epithelial barrier integrity, whereas IL-17A and IL-17 F are involved in the recruitment of neutrophils (132).”
BackgroundMühlbauer, M., Peréz-Chanona, E., & Jobin, C. (2013) · Inflammatory Bowel Diseases · doi:10.1097/01.mib.0000435445.96933.37 · Cited by 15
“through the induction of antimicrobial peptides, toning of the innate and adaptive immune responses, and the fortification of the barrier.(5) A compromised intestinal barrier could have deleterious consequences for the host as luminal contents may gain”
BackgroundAzm, A. R. A. E., Yousef, M., Kobtan, A. A., Awad, A., Elkassas, G., & Elfert, A. A. (2015) · Arab Journal of Gastroenterology · doi:10.1016/j.ajg.2015.02.005 · Cited by 15
“The expression of certain HSPs can be correlated with the carcinogenic process [11,12] as well as with the degree of cell proliferation and differentiation [13]; moreover, they have been implicated in the regulation of apoptosis [14].”
BackgroundMaternal Gut Microbes Control Offspring Sex and Survival
Erdman, S. E. (2014) · Journal of Probiotics & Health · doi:10.4172/2329-8901.1000120 · Cited by 16
“Mechanisms by which gut microbiota may impart effects that expand beyond the gastrointestinal tract remain largely unknown but involve neuroendocrine and immune pathways [19,27-33].”
BackgroundType 1 diabetes: Through the lens of human genome and metagenome interplay
Vahed, S. Z., Sani, H. M., Saadat, Y. R., Barzegari, A., & Omidi, Y. (2018) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2018.05.052 · Cited by 15
Amadei, F., Fröhlich, B., Stremmel, W., & Tanaka, M. (2018) · Langmuir · doi:10.1021/acs.langmuir.8b03035 · Cited by 15
Huo, Y., Liu, Z., Xuan, H., Lu, C., Yu, L., Bao, W., & Zhao, G. (2016) · Animal nutrition · doi:10.1016/j.aninu.2016.02.006 · Cited by 15
“Under invasion by pathogenic microbe, IL-22 will be up-regulated to protect the epithelial barrier (Craig et al., 2012).”
BackgroundSecretory IgM (sIgM) is an ancient master regulator of microbiota homeostasis and metabolismPreprint
Ding, Y., Fernández-Montero, Á., Mani, A., Casadei, E., Shibasaki, Y., Takizawa, F., Miyazawa, R., Salinas, I., & Sunyer, J. O. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.02.26.530119 · Cited by 15
Quijada, N. M., Bodas, R., Lorenzo, J. M., Schmitz‐Esser, S., Rodrı́guez-Làzaro, D., & Hernández, M. (2020) · Biomolecules · doi:10.3390/biom10081179 · Cited by 14
Exploring Molecular Interactions between Human Milk Hormone Insulin and Bifidobacteria
Rizzo, S. M., Alessandri, G., Lugli, G. A., Fontana, F., Tarracchini, C., Mancabelli, L., Viappiani, A., Bianchi, M. G., Bussolati, O., van Sinderen, D., et al. (2023) · Microbiology Spectrum · doi:10.1128/spectrum.00665-23 · Cited by 14
Hoang, D. H., Ky, P. X., & Thị, V. (2023) · Aquaculture Reports · doi:10.1016/j.aqrep.2023.101720 · Cited by 14
Xie, W., Sharma, A., Kaushik, H. K., Sharma, L., Nistha, Anwer, M. K., Sachdeva, M., Elossaily, G. M., Zhang, Y., Pillappan, R., et al. (2024) · Heliyon · doi:10.1016/j.heliyon.2024.e35336 · Cited by 14
“Gut microbiota, comprising a vast population of trillions of microorganisms inhabiting the GI tract, profoundly influences host metabolism [30].”
BackgroundGut microbe–host interactions in post-COVID syndrome: a debilitating or restorative partnership?
Scheithauer, T. P. M., Montijn, R. C., & Mieremet, A. (2024) · Gut Microbes · doi:10.1080/19490976.2024.2402544 · Cited by 15
“…the gastrointestinal system, covering the epithelium, immune system, and mucosal barrier, is dynamic and adaptive via continuous feedback mechanisms 38–41 In healthy situations, these interactions occur bidirectionally forming a symbiosis and gut microbes are well tolerated by the host’s immune…”
BackgroundYe, W., Shi, H., Qian, W., Meng, L., Wang, M., Zhou, Y., Zhang, W., Han, M., Peng, Y., Li, H., et al. (2024) · Nutrients · doi:10.3390/nu16203552 · Cited by 14
“The gut microbiota, with bacterial gene richness that exceeds human genomic content by a factor of 100, plays an indispensable role in both enhancing and modulating the host’s immune response [2].”
BackgroundHeart Failure and Gut Microbiota: What Is Cause and Effect?
Shen, S., Tian, B., Haizhu, Z., Wang, Y., Li, T., & Cao, Y. (2025) · Research · doi:10.34133/research.0610 · Cited by 18
“Gut microbiota can stimulate a healthy intestinal tract to release antimicrobial compounds and competitively secure nutrients and attachment sites, thereby defending against pathogen invasion and maintaining host physiological balance [ 14 ].”
Innate lymphoid cells and natural killer T cells in the gastrointestinal tract immune system.
Montalvillo, E., Garrote, J. A., Bernardo, D., & Arranz, E. M. (2014) · PubMed · Cited by 14
Debug Your Bugs – How NLRs Shape Intestinal Host-Microbe Interactions
Lipinski, S., & Rosenstiel, P. C. (2013) · Frontiers in Immunology · doi:10.3389/fimmu.2013.00479 · Cited by 14
“On the other hand, an extensive crosstalk between host and microbiota contributes to the normal development and maturation of the intestinal epithelium and immune system (3, 4).”
BackgroundЧИЖАЕВА, А. В., Oleinikova, Y., Saubenova, M., САДАНОВ, А. К., Amangeldi, A., Aitzhanova, A., АЛЫБАЕВА, А. Ж., & Елубаевна, Е. М. (2020) · AIMS Agriculture and Food · doi:10.3934/agrfood.2020.3.521 · Cited by 14
Koo, H., Crossman, D. K., & Morrow, C. D. (2020) · Frontiers in Pediatrics · doi:10.3389/fped.2020.549844 · Cited by 13
Metadata
- Authors
- Maynard, C. L., Elson, C. O., Hatton, R. D., & Weaver, C. T.
- Affiliations
- University of Alabama at Birmingham (US)
- Corresponding author
- Weaver, Casey T.
- Venue
- Nature
- Published
- 2012-09
- Volume
- 489
- Issue
- 7415
- Pages
- 231-241
- ISSN
- 0028-0836 (ISSN-L)
- 1476-4687
- PMC
- PMC4492337
- OpenAlex
- W2083102356
- Cited by
- 1,598
- References
- 101
- Citations by year
- 2026: 50 · 2025: 81 · 2024: 122 · 2023: 136 · 2022: 126 · 2021: 143 · 2020: 148 · 2019: 122 · 2018: 120 · 2017: 100 · 2016: 118 · 2015: 120 · 2014: 110 · 2013: 96 · 2012: 4
- FWCI
- 9.63
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- RePEc: Research Papers in Economics (submittedVersion)
- Funders
- Crohn's and Colitis Foundation
- National Institute of Allergy and Infectious Diseases (R01AI057956, T32AI007051)
- National Institute of Diabetes and Digestive and Kidney Diseases (R24DK064400, P01DK071176, R01DK093015)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Life Sciences › Immunology and Microbiology › Immunology › Immune Response and Inflammation
- Keywords
- gut microbiota, adaptive immunity, innate immunity, host-microbe symbiosis, immune homeostasis, immune-mediated diseases, immunological memory, gut microbiota modulation, host defense
- MeSH terms
- Blood Group Antigens, Cesarean Section, Epithelium, Female, Homeostasis, Humans, Infant, Infant, Newborn, Intestines, Pregnancy, T-Lymphocytes, Vagina, Metagenome
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