The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Fifty thousand years of Arctic vegetation and megafaunal diet
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
eDNA has provided insights into spatial and temporal distribution of animal species, including extinct hominins, and impact of global climatic change.
“Environmental DNA has also provided insights into the spatial and temporal distribution of animal species, including extinct hominins 49 , and the impact of global climatic change 22,48,90,91,328 .”
From Ancient DNA analysis (2021) · cites this paper as [22]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
IntCal13 and Marine13 radiocarbon age calibration curves 0–50,000 years cal BP
Reimer, P. J., Bard, E., Bayliss, A., Beck, J. W., Blackwell, P. G., Ramsey, C. B., Buck, C. E., Cheng, H., Edwards, R. L., Friedrich, M., et al. (2013) · Radiocarbon · doi:10.2458/azu_js_rc.55.16947 · Cited by 14,591
Jackson, S. T. (2012) · Quaternary Science Reviews · doi:10.1016/j.quascirev.2012.05.020 · Cited by 84
Flagged first, then by citations
Research works printed but not linked: 98
- Anderson, P. M., Edwards, M. E. & Brubaker, L. B. in The Quaternary Period in the United States. Developments in Quaternary Science (eds Gillespie, A. E., Porter, S. C. & Atwater, B. F. ) 427–440 (Elsevier, 2003) · DOI
- Murray, D. F. in Arctic and Alpine Biodiversity: Patterns, Causes and Ecosystem Consequences (eds Chapin, F. S. & Körner, C. ) 21–32 (Springer, 1995) · DOI
- Lamb, H. F. & Edwards, M. E. in Vegetation History. Handbook of Vegetation Science 7 (eds Huntley, B. & Webb, T. III ) 519–555 (Kluwer Academic, 1988) · DOI
- Kienast, F., Schirrmeister, L., Siegert, C. & Tarasov, P. E. Palaeobotanical evidence for warm summers in the East Siberian Arctic during the last cold stage. Quat. Res. 63, 283–300 (2005) · DOI
- Willerslev, E. et al. Diverse plant and animal genetic records from Holocene and Pleistocene sediments. Science 300, 791–795 (2003) · DOI · Paper page
- Haile, J. et al. Ancient DNA reveals late survival of mammoth and horse in interior Alaska. Proc. Natl Acad. Sci. USA 106, 22352–22357 (2009) · DOI · Paper page
- Jørgensen, T. et al. A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability. Mol. Ecol. 21, 1989–2003 (2012) · DOI
- Lydolph, M. C. et al. Beringian paleoecology inferred from permafrost-preserved fungal DNA. Appl. Environ. Microbiol. 71, 1012–1017 (2005) · DOI
- Andersen, K. et al. Meta-barcoding of ‘dirt’ DNA from soil reflects vertebrate biodiversity. Mol. Ecol. 21, 1966–1979 (2012) · DOI
- Parducci, L. et al. Glacial survival of boreal trees in northern Scandinavia. Science 335, 1083–1086 (2012) · DOI · Paper page
- Haile, J. et al. Ancient DNA chronology within sediment deposits: are paleobiological reconstructions possible and is DNA leaching a factor? Mol. Biol. Evol. 24, 982–989 (2007) · DOI
- Yoccoz, N. G. et al. DNA from soil mirrors plant taxonomic and growth form diversity. Mol. Ecol. 21, 3647–3655 (2012) · DOI
- Willerslev, E. & Cooper, A. Ancient DNA. Proc. R. Soc. Lond. B 272, 3–16 (2005) · DOI · Paper page
- Sønstebø, J. H. et al. Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate. Mol. Ecol. Resour. 10, 1009–1018 (2010) · DOI
- Hebsgaard, M. B. et al. The farm beneath the sand—an archaeological case study on ancient ‘dirt’ DNA. Antiquity 83, 430–444 (2009) · DOI
- Arnold, L. J. et al. Paper II - Dirt, dates and DNA: OSL and radiocarbon chronologies of perennially frozen sediments in Siberia, and their implications for sedimentary ancient DNA studies. Boreas 40, 417–445 (2011) · DOI
- Hopkins, D. M. in Paleoecology of Beringia (eds Hopkins, D. M., Matthews, J. V. Jr, Schweger, C. E. & Young, S. B. ) 3–28 (Academic, 1982) · DOI
- Ritchie, J. C. & Cwynar, L. C. in Paleoecology of Beringia (eds Hopkins, D. M., Matthews, J. V. Jr, Schweger, C. E., Young, S. B. & Stanley, V. ) 113–126 (Academic, 1982) · DOI
- Guthrie, R. D. Frozen Fauna of the Mammoth Steppe (Univ. Chicago Press, 1990) · DOI
- Yeates, G. W. Diversity of nematode faunae under three vegetation types on a pallic soil in Otago, New Zealand. NZ J. Zool. 23, 401–407 (1996) · DOI
- Sohlenius, B. Influence of climatic conditions on nematode coexistence — a laboratory experiment with a coniferous forest soil. Oikos 44, 430–438 (1985) · DOI
- Yeates, G. W. Nematodes as soil indicators: functional and biodiversity aspects. Biol. Fertil. Soils 37, 199–210 (2003) · DOI
- Dufrêne, M. & Legendre, P. Species assemblages and indicator species: the need for a flexible asymmetrical approach. Ecol. Monogr. 67, 345–366 (1997)
- Ruess, L., Michelsen, A. & Jonasson, S. Simulated climate change in subarctic soils: responses in nematode species composition and dominance structure. Nematology 1, 513–526 (1999) · DOI
- Sørensen, L. I., Mikola, J., Kytoviita, M.-M. & Olofsson, J. Trampling and spatial heterogeneity explain decomposer abundances in a sub-Arctic grassland subjected to simulated reindeer grazing. Ecosystems 12, 830–842 (2009) · DOI
- Popovici, I. & Ciobanu, M. Diversity and distribution of nematode communities in grasslands from Romania in relation to vegetation and soil characteristics. Appl. Soil Ecol. 14, 27–36 (2000) · DOI
- Hoschitz, M. & Kaufmann, R. Nematode community composition in five alpine habitats. Nematology 6, 737–747 (2004) · DOI
- Poinar, H. N. et al. Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis . Science 281, 402–406 (1998) · DOI
- Hofreiter, M. et al. A molecular analysis of ground sloth diet through the last glaciation. Mol. Ecol. 9, 1975–1984 (2000) · DOI
- Soininen, E. M. E. et al. Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures. Front. Zool. 6, 16 (2009) · DOI
- Zimov, S. A., Zimov, N. S., Tikhonov, A. N. & Chapin, F. S. I. Mammoth steppe: a high-productivity phenomenon. Quat. Sci. Rev. 57, 26–45 (2012) · DOI
- Owen-Smith, N. Pleistocene extinctions: the pivotal role of megaherbivores. Paleobiology 13, 351–362 (1987) · DOI
- Austrheim, G. & Eriksson, O. Recruitment and life-history traits of sparse plant species in subalpine grasslands. Can. J. Bot. 81, 171–182 (2003) · DOI
- Wardle, D. A. & Bardgett, R. D. Human-induced changes in large herbivorous mammal density: the consequences for decomposers. Front. Ecol. Environ. 2, 145–153 (2004) · DOI
- Güsewell, S. N. P ratios in terrestrial plants: variation and functional significance. New Phytol. 164, 243–266 (2004) · DOI
- Cornelissen, J. et al. Leaf digestibility and litter decomposability are related in a wide range of subarctic plant species and types. Funct. Ecol. 18, 779–786 (2004) · DOI
- McLauchlan, K. K., Williams, J. J., Craine, J. M. & Jeffers, E. S. Changes in global nitrogen cycling during the Holocene epoch. Nature 495, 352–355 (2013) · DOI
- van der Wal, R. Do herbivores cause habitat degradation or vegetation state transition? Evidence from the tundra. Oikos 114, 177–186 (2006) · DOI
- Bråthen, K. A. et al. Induced shift in ecosystem productivity? Extensive scale effects of abundant large herbivores. Ecosystems 10, 773–789 (2007) · DOI
- Taberlet, P. et al. Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Res. 35, e14 (2007) · DOI · Paper page
- Sayers, E. W. et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 37, D5–D15 (2009) · DOI
- Bray, J. R. & Curtis, J. T. An ordination of the upland forest communities of southern Wisconsin. Ecol. Monogr. 27, 325–349 (1957) · DOI
- Anderson, M. J. A new method for non-parametric multivariate analysis of variance. Austral. Ecol. 26, 32–46 (2001)
- Shepard, R. N. The analysis of proximities: multidimensional scaling with an unknown distance function. I. Psychometrika 27, 125–140 (1962) · DOI
- Shepard, R. N. The analysis of proximities: multidimensional scaling with an unknown distance function. II. Psychometrika 27, 219–246 (1962) · DOI
- Nekola, J. C. & White, P. S. The distance decay of similarity in biogeography and ecology. J. Biogeogr. 26, 867–878 (1999) · DOI
- Klotz, S., Kühn, I. & Durka, W. BIOLFLOR (Bundesamt für Naturschutz, 2002)
- Willerslev, E. et al. Ancient biomolecules from deep ice cores reveal a forested southern Greenland. Science 317, 111–114 (2007) · DOI · Paper page
- Epp, L. S. et al. New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems. Mol. Ecol. 21, 1821–1833 (2012) · DOI
- Vestergård, M. Nematode assemblages in the rhizosphere of spring barley (Hordeum vulgare L.) depended on fertilisation and plant growth phase. Pedobiologia 48, 257–265 (2004) · DOI
- Brock, F., Higham, T., Ditchfield, P. & Ramsey, C. B. Current pretreatment methods for AMS radiocarbon dating at the Oxford Radiocarbon Accelerator Unit (ORAU). Radiocarbon 52, 103–112 (2010) · DOI
- Hua, Q. & Barbetti, M. Review of tropospheric bomb 14C data for carbon cycle modeling and age calibration purposes. Radiocarbon 46, 1273–1298 (2007) · DOI
- Goslar, T., Van der Knaap, W. O., Kamenik, C. & van Leeuwen, J. Free-shape 14C age–depth modelling of an intensively dated modern peat profile. J. Quaternary Sci. 24, 481–499 (2009) · DOI
- Boessenkool, S. et al. Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA. Mol. Ecol. 21, 1806–1815 (2012) · DOI
- Haile, J. in Methods in Molecular Biology – Ancient DNA (eds Shaprio, B. & Hofreiter, M. ) 57–63 (Humana Press Series, 2012) · DOI
- Coissac, E. OligoTag: a program for designing sets of tags for next-generation sequencing of multiplexed samples. Methods Mol. Biol. 888, 13–31 (2012) · DOI
- Ait Baamrane, M. A. et al. Assessment of the food habits of the Moroccan dorcas gazelle in M’Sabih Talaa, west central Morocco, using the trnL approach. PLoS ONE 7, e35643 (2012) · DOI
- Taylor, P. G. Reproducibility of ancient DNA sequences from extinct Pleistocene fauna. Mol. Biol. Evol. 13, 283–285 (1996) · DOI
- Binladen, J. et al. The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS ONE 2, e197 (2007) · DOI
- Birks, H. J. B. & Birks, H. H. Quaternary Palaeoecology (London Edward Arnold, 2004)
- Höfle, C. & Ping, C.-L. Properties and soil development of late-Pleistocene paleosols from Seward Peninsula, northwest Alaska. Geoderma 71, 219–243 (1996) · DOI
- Tomašových, A. & Kidwell, S. M. Predicting the effects of increasing temporal scale on species composition, diversity, and rank-abundance distributions. Paleobiology 36, 672–695 (2010) · DOI
- Cornelissen, J. H. C. et al. Global negative vegetation feedback to climate warming responses of leaf litter decomposition rates in cold biomes. Ecol. Lett. 10, 619–627 (2007) · DOI
- Aerts, R. & Chapin, F. S. I. The mineral nutrition of wild plants revisited: a re-evaluation of processes and patterns. Adv. Ecol. Res. 30, 1–67 (1999) · DOI
- Crooks, G. E., Hon, G., Chandonia, J.-M. & Brenner, S. E. WebLogo: a sequence logo generator. Genome Res. 14, 1188–1190 (2004) · DOI
- Dansgaard, W. et al. Evidence for general instability of past climate from a 250-kyr ice-core record. Nature 364, 218–220 (1993) · DOI
- Caliński, T. & Harabasz, J. A dendrite method for cluster analysis. Commun. Stat. 3, 1–27 (1974)
- Kühn, I., Durka, W. & Klotz, S. BiolFlor — a new plant-trait database as a tool for plant invasion ecology. Divers. Distrib. 10, 363–365 (2004) · DOI
- Clarke, K. R., Somerfield, P. J. & Chapman, M. G. On resemblance measures for ecological studies, including taxonomic dissimilarities and a zero-adjusted Bray–Curtis coefficient for denuded assemblages. J. Exp. Mar. Biol. Ecol. 330, 55–80 (2006) · DOI
- Austin, M. P. Inconsistencies between theory and methodology: a recurrent problem in ordination studies. J. Veg. Sci. 24, 251–268 (2013) · DOI
- Faith, D. P., Minchin, P. R. & Belbin, L. Compositional dissimilarity as a robust measure of ecological distance. Vegetatio 69, 57–68 (1987) · DOI
- Legendre, P. & Legendre, L. Numerical Ecology (Elsevier, 1998)
- Anderson, M. J., Connell, S. D. & Gillanders, B. M. Relationships between taxonomic resolution and spatial scales of multivariate variation. J. Anim. Ecol. 74, 636–646 (2005) · DOI
- Gotelli, N. J. & Colwell, R. K. in Biological Diversity: Frontiers in Measurement and Assessment ( Magurran, A. E. & McGill, B. J. ) 39–54 (Oxford Univ. Press, 2011)
- Walther, B. A. & Moore, J. L. The concepts of bias, precision and accuracy, and their use in testing the performance of species richness estimators, with a literature review of estimator performance. Ecography 28, 815–829 (2005) · DOI
- Hortal, J., Borges, P. A. V. & Gaspar, C. Evaluating the performance of species richness estimators: sensitivity to sample grain size. J. Anim. Ecol. 75, 274–287 (2006) · DOI
- Vavrek, M. J. Fossil: palaeoecological and palaeogeographical analysis tools. Palaeontol. Electronica 14 (1T). 16p (2011)
- Davison, J., Öpik, M. & Daniell, T. J. Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages. FEMS Microbiol. Ecol. 78, 103–115 (2011) · DOI
- Munch, K., Boomsma, W., Huelsenbeck, J. P., Willerslev, E. & Nielsen, R. Statistical assignment of DNA sequences using Bayesian phylogenetics. Syst. Biol. 57, 750–757 (2008) · DOI
- Underwood, A. J. Experiments in Ecology: Their Logical Design and Interpretation Using Analysis of Variance (Cambridge Univ. Press, 1997)
- Shehzad, W. et al. Prey preference of snow leopard (Panthera uncia) in South Gobi, Mongolia. PLoS ONE 7, e32104 (2012) · DOI
- Möller, P., Bolshiyanov, D. Y. & Bergsten, H. Weichselian geology and palaeoenvironmental history of the central Taymyr Peninsula, Siberia, indicating no glaciation during the last global glacial maximum. Boreas 28, 92–114 (1999) · DOI
- Kuzmina, S. A. et al. The late Pleistocene environment of the Eastern West Beringia based on the principal section at the Main River, Chukotka. Quat. Sci. Rev. 30, 2091–2106 (2011) · DOI
- Wetterich, S., Schirrmeister, L. & Kholodov, A. L. The joint Russian-German expedition Beringia/Kolyma 2008 during the International Polar Year (IPY) 2007/2008. Reports on Polar and Marine Research 636, 43 (2011)
- Zanina, O. G., Gubin, S. V. & Kuzmina, S. A. Late-Pleistocene (MIS 3-2) palaeoenvironments as recorded by sediments, palaeosols, and ground-squirrel nests at Duvanny Yar, Kolyma lowland, northeast Siberia. Quat. Sci. Rev. 30, 2107–2123 (2011) · DOI
- Ager, T. A. Late Quaternary vegetation and climate history of the central Bering land bridge from St. Michael Island, western Alaska. Quat. Res. 60, 19–32 (2003) · DOI
- Muhs, D. R., Ager, T. A., Been, J., Bradbury, J. P. & Dean, W. E. A late Quaternary record of eolian silt deposition in a maar lake, St. Michael Island, western Alaska. Quat. Res. 60, 110–122 (2003) · DOI
- Sanborn, P. T., Smith, C. A., Froese, D. G. & Zazula, G. D. Full-glacial paleosols in perennially frozen loess sequences, Klondike goldfields, Yukon Territory, Canada. Quat. Res. 66, 147–157 (2006) · DOI
- Zazula, G. D., Froese, D. G., Elias, S. A. & Kuzmina, S. Arctic ground squirrels of the mammoth-steppe: paleoecology of Late Pleistocene middens (∼24000–29450 14C yr BP), Yukon Territory, Canada. Quat. Sci. Rev. 26, 979–1003 (2007) · DOI
- Froese, D. G., Zazula, G. D. & Reyes, A. V. Seasonality of the late Pleistocene Dawson tephra and exceptional preservation of a buried riparian surface in central Yukon Territory, Canada. Quat. Sci. Rev. 25, 1542–1551 (2006) · DOI
- Demuro, M. et al. Optically stimulated luminescence dating of single and multiple grains of quartz from perennially frozen loess in western Yukon Territory, Canada: comparison with radiocarbon chronologies for the late Pleistocene Dawson tephra. Quat. Geochronol. 3, 346–364 (2008) · DOI
- Beilman, D. W. Holocene and recent carbon accumulation in Svalbard mires. Svalbard Geology Workshop, Tromso Norway 27–29 April. (2011)
- Kosintsev, P. A. et al. Environmental reconstruction inferred from the intestinal contents of the Yamal baby mammoth Lyuba (Mammuthus primigenius Blumenbach, 1799). Quat. Int. 255, 231–238 (2012) · DOI
- Boeskorov, G. G. et al. Woolly rhino discovery in the lower Kolyma River. Quat. Sci. Rev. 30, 2262–2272 (2011) · DOI
- Harington, C. R. & Eggleston-Stott, M. Partial carcass of a small Pleistocene horse from Last Chance Creek near Dawson City, Yukon. Curr. Res. Pleistocene 13, 105–107 (1996)
- Sulerzhitsky, L. D. & Romanenko, F. A. Age and dispersal of ‘mammoth’ fauna in Asian Polar region (according to radiocarbon data). Kriosfera Zemli 1, 12–19 (1997)
- Lazarev, P. A. in: Mammals of the Yakutian Anthropogene (ed, Labutin, Y. ) 55–97 [in Russian] (Russian Acad. Sci., 1998)
- Kosintsev, P. A., Lapteva, E. G., Korona, O. M. & Zanina, O. G. Living environments and diet of the Mongochen mammoth, Gydan Peninsula, Russia. Quat. Int. 276–277, 253–268 (2012) · DOI
Cited by
Sorted by citations
Orlando, L., Allaby, R., Skoglund, P., Der Sarkissian, C., Stockhammer, P. W., Ávila-Arcos, M. C., Fu, Q., Krause, J., Willerslev, E., Stone, A. C., et al. (2021) · Nature Reviews Methods Primers · doi:10.1038/s43586-020-00011-0 · Cited by 411
Self-citationSoe, E., Davison, J., Süld, K., Valdmann, H., Laurimaa, L., & Saarma, U. (2017) · Mammal Review · doi:10.1111/mam.12092 · Cited by 121
Self-citationAncient Biomolecules and Evolutionary Inference
Cappellini, E., Prohaska, A., Racimo, F., Welker, F., Pedersen, M. W., Allentoft, M. E., de Barros Damgaard, P., Gutenbrunner, P., Dunne, J., Hammann, S., et al. (2018) · Annual Review of Biochemistry · doi:10.1146/annurev-biochem-062917-012002 · Cited by 118
Self-citationHuman evolution: a tale from ancient genomes
Llamas, B., Willerslev, E., & Orlando, L. (2017) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2015.0484 · Cited by 100
Self-citationMultiple dimensions of dietary diversity in large mammalian herbivores
Kartzinel, T. R., & Pringle, R. M. (2020) · Journal of Animal Ecology · doi:10.1111/1365-2656.13206 · Cited by 63
Seasonal patterns of bison diet across climate gradients in North America.
Craine, J. M. (2021) · Scientific Reports · doi:10.1038/s41598-021-86260-9 · Cited by 50
Self-citationConservation Genomics in a Changing Arctic
Colella, J. P., Talbot, S. L., Brochmann, C., Taylor, E. B., Hoberg, E. P., & Cook, J. A. (2020) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2019.09.008 · Cited by 38
Self-citation
Metadata
- Authors
- Willerslev, E., Davison, J., Moora, M., Zobel, M., Coissac, E., Edwards, M. E., Lorenzen, E. D., Vestergård, M., Gussarova, G., Haile, J., Craine, J., Gielly, L., Boessenkool, S., Epp, L. S., Pearman, P. B., Cheddadi, R., Murray, D., Bråthen, K. A., Yoccoz, N., Binney, H., Cruaud, C., Wincker, P., Goslar, T., Alsos, I. G., Bellemain, E., Brysting, A. K., Elven, R., Sønstebø, J. H., Murton, J., Sher, A., Rasmussen, M., Rønn, R., Mourier, T., Cooper, A., Austin, J., Möller, P., Froese, D., Zazula, G., Pompanon, F., Rioux, D., Niderkorn, V., Tikhonov, A., Savvinov, G., Roberts, R. G., MacPhee, R. D. E., Gilbert, M. T. P., Kjær, K. H., Orlando, L., Brochmann, C., & Taberlet, P.
- Venue
- Nature
- Published
- 2014-02
- Volume
- 506
- Issue
- 7486
- Pages
- 47-51
- ISSN
- 0028-0836
- 1476-4687
- Cited by
- 569
- References
- 2
- Language
- en
- Licence
- www.springer.com/tdm (tdm)
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review