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Fifty thousand years of Arctic vegetation and megafaunal diet

Willerslev, Eske, Davison, John, Moora, Mari, Zobel, Martin, Coissac, Eric, Edwards, Mary E., Lorenzen, Eline D., Vestergård, Mette, Gussarova, Galina, Haile, James, Craine, Joseph, Gielly, Ludovic, Boessenkool, Sanne, Epp, Laura S., Pearman, Peter B., Cheddadi, Rachid, Murray, David, Bråthen, Kari Anne, Yoccoz, Nigel, Binney, Heather, Cruaud, Corinne, Wincker, Patrick, Goslar, Tomasz, Alsos, Inger Greve, Bellemain, Eva, Brysting, Anne Krag, Elven, Reidar, Sønstebø, Jørn Henrik, Murton, Julian, Sher, Andrei, Rasmussen, Morten, Rønn, Regin, Mourier, Tobias, Cooper, Alan, Austin, Jeremy, Möller, Per, Froese, Duane, Zazula, Grant, Pompanon, François, Rioux, Delphine, Niderkorn, Vincent, Tikhonov, Alexei, Savvinov, Grigoriy, Roberts, Richard G., MacPhee, Ross D. E., Gilbert, M. Thomas P., Kjær, Kurt H., Orlando, Ludovic, Brochmann, Christian, Taberlet, Pierre·2014·Nature

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  • eDNA has provided insights into spatial and temporal distribution of animal species, including extinct hominins, and impact of global climatic change.

    “Environmental DNA has also provided insights into the spatial and temporal distribution of animal species, including extinct hominins 49 , and the impact of global climatic change 22,48,90,91,328 .”

    From Ancient DNA analysis (2021) · cites this paper as [22]

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  1. Anderson, P. M., Edwards, M. E. & Brubaker, L. B. in The Quaternary Period in the United States. Developments in Quaternary Science (eds Gillespie, A. E., Porter, S. C. & Atwater, B. F. ) 427–440 (Elsevier, 2003) · DOI
  2. Murray, D. F. in Arctic and Alpine Biodiversity: Patterns, Causes and Ecosystem Consequences (eds Chapin, F. S. & Körner, C. ) 21–32 (Springer, 1995) · DOI
  3. Lamb, H. F. & Edwards, M. E. in Vegetation History. Handbook of Vegetation Science 7 (eds Huntley, B. & Webb, T. III ) 519–555 (Kluwer Academic, 1988) · DOI
  4. Kienast, F., Schirrmeister, L., Siegert, C. & Tarasov, P. E. Palaeobotanical evidence for warm summers in the East Siberian Arctic during the last cold stage. Quat. Res. 63, 283–300 (2005) · DOI
  5. Willerslev, E. et al. Diverse plant and animal genetic records from Holocene and Pleistocene sediments. Science 300, 791–795 (2003) · DOI · Paper page
  6. Haile, J. et al. Ancient DNA reveals late survival of mammoth and horse in interior Alaska. Proc. Natl Acad. Sci. USA 106, 22352–22357 (2009) · DOI · Paper page
  7. Jørgensen, T. et al. A comparative study of ancient sedimentary DNA, pollen and macrofossils from permafrost sediments of northern Siberia reveals long-term vegetational stability. Mol. Ecol. 21, 1989–2003 (2012) · DOI
  8. Lydolph, M. C. et al. Beringian paleoecology inferred from permafrost-preserved fungal DNA. Appl. Environ. Microbiol. 71, 1012–1017 (2005) · DOI
  9. Andersen, K. et al. Meta-barcoding of ‘dirt’ DNA from soil reflects vertebrate biodiversity. Mol. Ecol. 21, 1966–1979 (2012) · DOI
  10. Parducci, L. et al. Glacial survival of boreal trees in northern Scandinavia. Science 335, 1083–1086 (2012) · DOI · Paper page
  11. Haile, J. et al. Ancient DNA chronology within sediment deposits: are paleobiological reconstructions possible and is DNA leaching a factor? Mol. Biol. Evol. 24, 982–989 (2007) · DOI
  12. Yoccoz, N. G. et al. DNA from soil mirrors plant taxonomic and growth form diversity. Mol. Ecol. 21, 3647–3655 (2012) · DOI
  13. Willerslev, E. & Cooper, A. Ancient DNA. Proc. R. Soc. Lond. B 272, 3–16 (2005) · DOI · Paper page
  14. Sønstebø, J. H. et al. Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate. Mol. Ecol. Resour. 10, 1009–1018 (2010) · DOI
  15. Hebsgaard, M. B. et al. The farm beneath the sand—an archaeological case study on ancient ‘dirt’ DNA. Antiquity 83, 430–444 (2009) · DOI
  16. Arnold, L. J. et al. Paper II - Dirt, dates and DNA: OSL and radiocarbon chronologies of perennially frozen sediments in Siberia, and their implications for sedimentary ancient DNA studies. Boreas 40, 417–445 (2011) · DOI
  17. Hopkins, D. M. in Paleoecology of Beringia (eds Hopkins, D. M., Matthews, J. V. Jr, Schweger, C. E. & Young, S. B. ) 3–28 (Academic, 1982) · DOI
  18. Ritchie, J. C. & Cwynar, L. C. in Paleoecology of Beringia (eds Hopkins, D. M., Matthews, J. V. Jr, Schweger, C. E., Young, S. B. & Stanley, V. ) 113–126 (Academic, 1982) · DOI
  19. Guthrie, R. D. Frozen Fauna of the Mammoth Steppe (Univ. Chicago Press, 1990) · DOI
  20. Yeates, G. W. Diversity of nematode faunae under three vegetation types on a pallic soil in Otago, New Zealand. NZ J. Zool. 23, 401–407 (1996) · DOI
  21. Sohlenius, B. Influence of climatic conditions on nematode coexistence — a laboratory experiment with a coniferous forest soil. Oikos 44, 430–438 (1985) · DOI
  22. Yeates, G. W. Nematodes as soil indicators: functional and biodiversity aspects. Biol. Fertil. Soils 37, 199–210 (2003) · DOI
  23. Dufrêne, M. & Legendre, P. Species assemblages and indicator species: the need for a flexible asymmetrical approach. Ecol. Monogr. 67, 345–366 (1997)
  24. Ruess, L., Michelsen, A. & Jonasson, S. Simulated climate change in subarctic soils: responses in nematode species composition and dominance structure. Nematology 1, 513–526 (1999) · DOI
  25. Sørensen, L. I., Mikola, J., Kytoviita, M.-M. & Olofsson, J. Trampling and spatial heterogeneity explain decomposer abundances in a sub-Arctic grassland subjected to simulated reindeer grazing. Ecosystems 12, 830–842 (2009) · DOI
  26. Popovici, I. & Ciobanu, M. Diversity and distribution of nematode communities in grasslands from Romania in relation to vegetation and soil characteristics. Appl. Soil Ecol. 14, 27–36 (2000) · DOI
  27. Hoschitz, M. & Kaufmann, R. Nematode community composition in five alpine habitats. Nematology 6, 737–747 (2004) · DOI
  28. Poinar, H. N. et al. Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis . Science 281, 402–406 (1998) · DOI
  29. Hofreiter, M. et al. A molecular analysis of ground sloth diet through the last glaciation. Mol. Ecol. 9, 1975–1984 (2000) · DOI
  30. Soininen, E. M. E. et al. Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures. Front. Zool. 6, 16 (2009) · DOI
  31. Zimov, S. A., Zimov, N. S., Tikhonov, A. N. & Chapin, F. S. I. Mammoth steppe: a high-productivity phenomenon. Quat. Sci. Rev. 57, 26–45 (2012) · DOI
  32. Owen-Smith, N. Pleistocene extinctions: the pivotal role of megaherbivores. Paleobiology 13, 351–362 (1987) · DOI
  33. Austrheim, G. & Eriksson, O. Recruitment and life-history traits of sparse plant species in subalpine grasslands. Can. J. Bot. 81, 171–182 (2003) · DOI
  34. Wardle, D. A. & Bardgett, R. D. Human-induced changes in large herbivorous mammal density: the consequences for decomposers. Front. Ecol. Environ. 2, 145–153 (2004) · DOI
  35. Güsewell, S. N. P ratios in terrestrial plants: variation and functional significance. New Phytol. 164, 243–266 (2004) · DOI
  36. Cornelissen, J. et al. Leaf digestibility and litter decomposability are related in a wide range of subarctic plant species and types. Funct. Ecol. 18, 779–786 (2004) · DOI
  37. McLauchlan, K. K., Williams, J. J., Craine, J. M. & Jeffers, E. S. Changes in global nitrogen cycling during the Holocene epoch. Nature 495, 352–355 (2013) · DOI
  38. van der Wal, R. Do herbivores cause habitat degradation or vegetation state transition? Evidence from the tundra. Oikos 114, 177–186 (2006) · DOI
  39. Bråthen, K. A. et al. Induced shift in ecosystem productivity? Extensive scale effects of abundant large herbivores. Ecosystems 10, 773–789 (2007) · DOI
  40. Taberlet, P. et al. Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding. Nucleic Acids Res. 35, e14 (2007) · DOI · Paper page
  41. Sayers, E. W. et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 37, D5–D15 (2009) · DOI
  42. Bray, J. R. & Curtis, J. T. An ordination of the upland forest communities of southern Wisconsin. Ecol. Monogr. 27, 325–349 (1957) · DOI
  43. Anderson, M. J. A new method for non-parametric multivariate analysis of variance. Austral. Ecol. 26, 32–46 (2001)
  44. Shepard, R. N. The analysis of proximities: multidimensional scaling with an unknown distance function. I. Psychometrika 27, 125–140 (1962) · DOI
  45. Shepard, R. N. The analysis of proximities: multidimensional scaling with an unknown distance function. II. Psychometrika 27, 219–246 (1962) · DOI
  46. Nekola, J. C. & White, P. S. The distance decay of similarity in biogeography and ecology. J. Biogeogr. 26, 867–878 (1999) · DOI
  47. Klotz, S., Kühn, I. & Durka, W. BIOLFLOR (Bundesamt für Naturschutz, 2002)
  48. Willerslev, E. et al. Ancient biomolecules from deep ice cores reveal a forested southern Greenland. Science 317, 111–114 (2007) · DOI · Paper page
  49. Epp, L. S. et al. New environmental metabarcodes for analysing soil DNA: potential for studying past and present ecosystems. Mol. Ecol. 21, 1821–1833 (2012) · DOI
  50. Vestergård, M. Nematode assemblages in the rhizosphere of spring barley (Hordeum vulgare L.) depended on fertilisation and plant growth phase. Pedobiologia 48, 257–265 (2004) · DOI
  51. Brock, F., Higham, T., Ditchfield, P. & Ramsey, C. B. Current pretreatment methods for AMS radiocarbon dating at the Oxford Radiocarbon Accelerator Unit (ORAU). Radiocarbon 52, 103–112 (2010) · DOI
  52. Hua, Q. & Barbetti, M. Review of tropospheric bomb 14C data for carbon cycle modeling and age calibration purposes. Radiocarbon 46, 1273–1298 (2007) · DOI
  53. Goslar, T., Van der Knaap, W. O., Kamenik, C. & van Leeuwen, J. Free-shape 14C age–depth modelling of an intensively dated modern peat profile. J. Quaternary Sci. 24, 481–499 (2009) · DOI
  54. Boessenkool, S. et al. Blocking human contaminant DNA during PCR allows amplification of rare mammal species from sedimentary ancient DNA. Mol. Ecol. 21, 1806–1815 (2012) · DOI
  55. Haile, J. in Methods in Molecular Biology – Ancient DNA (eds Shaprio, B. & Hofreiter, M. ) 57–63 (Humana Press Series, 2012) · DOI
  56. Coissac, E. OligoTag: a program for designing sets of tags for next-generation sequencing of multiplexed samples. Methods Mol. Biol. 888, 13–31 (2012) · DOI
  57. Ait Baamrane, M. A. et al. Assessment of the food habits of the Moroccan dorcas gazelle in M’Sabih Talaa, west central Morocco, using the trnL approach. PLoS ONE 7, e35643 (2012) · DOI
  58. Taylor, P. G. Reproducibility of ancient DNA sequences from extinct Pleistocene fauna. Mol. Biol. Evol. 13, 283–285 (1996) · DOI
  59. Binladen, J. et al. The use of coded PCR primers enables high-throughput sequencing of multiple homolog amplification products by 454 parallel sequencing. PLoS ONE 2, e197 (2007) · DOI
  60. Birks, H. J. B. & Birks, H. H. Quaternary Palaeoecology (London Edward Arnold, 2004)
  61. Höfle, C. & Ping, C.-L. Properties and soil development of late-Pleistocene paleosols from Seward Peninsula, northwest Alaska. Geoderma 71, 219–243 (1996) · DOI
  62. Tomašových, A. & Kidwell, S. M. Predicting the effects of increasing temporal scale on species composition, diversity, and rank-abundance distributions. Paleobiology 36, 672–695 (2010) · DOI
  63. Cornelissen, J. H. C. et al. Global negative vegetation feedback to climate warming responses of leaf litter decomposition rates in cold biomes. Ecol. Lett. 10, 619–627 (2007) · DOI
  64. Aerts, R. & Chapin, F. S. I. The mineral nutrition of wild plants revisited: a re-evaluation of processes and patterns. Adv. Ecol. Res. 30, 1–67 (1999) · DOI
  65. Crooks, G. E., Hon, G., Chandonia, J.-M. & Brenner, S. E. WebLogo: a sequence logo generator. Genome Res. 14, 1188–1190 (2004) · DOI
  66. Dansgaard, W. et al. Evidence for general instability of past climate from a 250-kyr ice-core record. Nature 364, 218–220 (1993) · DOI
  67. Caliński, T. & Harabasz, J. A dendrite method for cluster analysis. Commun. Stat. 3, 1–27 (1974)
  68. Kühn, I., Durka, W. & Klotz, S. BiolFlor — a new plant-trait database as a tool for plant invasion ecology. Divers. Distrib. 10, 363–365 (2004) · DOI
  69. Clarke, K. R., Somerfield, P. J. & Chapman, M. G. On resemblance measures for ecological studies, including taxonomic dissimilarities and a zero-adjusted Bray–Curtis coefficient for denuded assemblages. J. Exp. Mar. Biol. Ecol. 330, 55–80 (2006) · DOI
  70. Austin, M. P. Inconsistencies between theory and methodology: a recurrent problem in ordination studies. J. Veg. Sci. 24, 251–268 (2013) · DOI
  71. Faith, D. P., Minchin, P. R. & Belbin, L. Compositional dissimilarity as a robust measure of ecological distance. Vegetatio 69, 57–68 (1987) · DOI
  72. Legendre, P. & Legendre, L. Numerical Ecology (Elsevier, 1998)
  73. Anderson, M. J., Connell, S. D. & Gillanders, B. M. Relationships between taxonomic resolution and spatial scales of multivariate variation. J. Anim. Ecol. 74, 636–646 (2005) · DOI
  74. Gotelli, N. J. & Colwell, R. K. in Biological Diversity: Frontiers in Measurement and Assessment ( Magurran, A. E. & McGill, B. J. ) 39–54 (Oxford Univ. Press, 2011)
  75. Walther, B. A. & Moore, J. L. The concepts of bias, precision and accuracy, and their use in testing the performance of species richness estimators, with a literature review of estimator performance. Ecography 28, 815–829 (2005) · DOI
  76. Hortal, J., Borges, P. A. V. & Gaspar, C. Evaluating the performance of species richness estimators: sensitivity to sample grain size. J. Anim. Ecol. 75, 274–287 (2006) · DOI
  77. Vavrek, M. J. Fossil: palaeoecological and palaeogeographical analysis tools. Palaeontol. Electronica 14 (1T). 16p (2011)
  78. Davison, J., Öpik, M. & Daniell, T. J. Arbuscular mycorrhizal fungal communities in plant roots are not random assemblages. FEMS Microbiol. Ecol. 78, 103–115 (2011) · DOI
  79. Munch, K., Boomsma, W., Huelsenbeck, J. P., Willerslev, E. & Nielsen, R. Statistical assignment of DNA sequences using Bayesian phylogenetics. Syst. Biol. 57, 750–757 (2008) · DOI
  80. Underwood, A. J. Experiments in Ecology: Their Logical Design and Interpretation Using Analysis of Variance (Cambridge Univ. Press, 1997)
  81. Shehzad, W. et al. Prey preference of snow leopard (Panthera uncia) in South Gobi, Mongolia. PLoS ONE 7, e32104 (2012) · DOI
  82. Möller, P., Bolshiyanov, D. Y. & Bergsten, H. Weichselian geology and palaeoenvironmental history of the central Taymyr Peninsula, Siberia, indicating no glaciation during the last global glacial maximum. Boreas 28, 92–114 (1999) · DOI
  83. Kuzmina, S. A. et al. The late Pleistocene environment of the Eastern West Beringia based on the principal section at the Main River, Chukotka. Quat. Sci. Rev. 30, 2091–2106 (2011) · DOI
  84. Wetterich, S., Schirrmeister, L. & Kholodov, A. L. The joint Russian-German expedition Beringia/Kolyma 2008 during the International Polar Year (IPY) 2007/2008. Reports on Polar and Marine Research 636, 43 (2011)
  85. Zanina, O. G., Gubin, S. V. & Kuzmina, S. A. Late-Pleistocene (MIS 3-2) palaeoenvironments as recorded by sediments, palaeosols, and ground-squirrel nests at Duvanny Yar, Kolyma lowland, northeast Siberia. Quat. Sci. Rev. 30, 2107–2123 (2011) · DOI
  86. Ager, T. A. Late Quaternary vegetation and climate history of the central Bering land bridge from St. Michael Island, western Alaska. Quat. Res. 60, 19–32 (2003) · DOI
  87. Muhs, D. R., Ager, T. A., Been, J., Bradbury, J. P. & Dean, W. E. A late Quaternary record of eolian silt deposition in a maar lake, St. Michael Island, western Alaska. Quat. Res. 60, 110–122 (2003) · DOI
  88. Sanborn, P. T., Smith, C. A., Froese, D. G. & Zazula, G. D. Full-glacial paleosols in perennially frozen loess sequences, Klondike goldfields, Yukon Territory, Canada. Quat. Res. 66, 147–157 (2006) · DOI
  89. Zazula, G. D., Froese, D. G., Elias, S. A. & Kuzmina, S. Arctic ground squirrels of the mammoth-steppe: paleoecology of Late Pleistocene middens (∼24000–29450 14C yr BP), Yukon Territory, Canada. Quat. Sci. Rev. 26, 979–1003 (2007) · DOI
  90. Froese, D. G., Zazula, G. D. & Reyes, A. V. Seasonality of the late Pleistocene Dawson tephra and exceptional preservation of a buried riparian surface in central Yukon Territory, Canada. Quat. Sci. Rev. 25, 1542–1551 (2006) · DOI
  91. Demuro, M. et al. Optically stimulated luminescence dating of single and multiple grains of quartz from perennially frozen loess in western Yukon Territory, Canada: comparison with radiocarbon chronologies for the late Pleistocene Dawson tephra. Quat. Geochronol. 3, 346–364 (2008) · DOI
  92. Beilman, D. W. Holocene and recent carbon accumulation in Svalbard mires. Svalbard Geology Workshop, Tromso Norway 27–29 April. (2011)
  93. Kosintsev, P. A. et al. Environmental reconstruction inferred from the intestinal contents of the Yamal baby mammoth Lyuba (Mammuthus primigenius Blumenbach, 1799). Quat. Int. 255, 231–238 (2012) · DOI
  94. Boeskorov, G. G. et al. Woolly rhino discovery in the lower Kolyma River. Quat. Sci. Rev. 30, 2262–2272 (2011) · DOI
  95. Harington, C. R. & Eggleston-Stott, M. Partial carcass of a small Pleistocene horse from Last Chance Creek near Dawson City, Yukon. Curr. Res. Pleistocene 13, 105–107 (1996)
  96. Sulerzhitsky, L. D. & Romanenko, F. A. Age and dispersal of ‘mammoth’ fauna in Asian Polar region (according to radiocarbon data). Kriosfera Zemli 1, 12–19 (1997)
  97. Lazarev, P. A. in: Mammals of the Yakutian Anthropogene (ed, Labutin, Y. ) 55–97 [in Russian] (Russian Acad. Sci., 1998)
  98. Kosintsev, P. A., Lapteva, E. G., Korona, O. M. & Zanina, O. G. Living environments and diet of the Mongochen mammoth, Gydan Peninsula, Russia. Quat. Int. 276–277, 253–268 (2012) · DOI

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Authors
Willerslev, E., Davison, J., Moora, M., Zobel, M., Coissac, E., Edwards, M. E., Lorenzen, E. D., Vestergård, M., Gussarova, G., Haile, J., Craine, J., Gielly, L., Boessenkool, S., Epp, L. S., Pearman, P. B., Cheddadi, R., Murray, D., Bråthen, K. A., Yoccoz, N., Binney, H., Cruaud, C., Wincker, P., Goslar, T., Alsos, I. G., Bellemain, E., Brysting, A. K., Elven, R., Sønstebø, J. H., Murton, J., Sher, A., Rasmussen, M., Rønn, R., Mourier, T., Cooper, A., Austin, J., Möller, P., Froese, D., Zazula, G., Pompanon, F., Rioux, D., Niderkorn, V., Tikhonov, A., Savvinov, G., Roberts, R. G., MacPhee, R. D. E., Gilbert, M. T. P., Kjær, K. H., Orlando, L., Brochmann, C., & Taberlet, P.
Venue
Nature
Published
2014-02
Volume
506
Issue
7486
Pages
47-51
ISSN
  • 0028-0836
  • 1476-4687
Cited by
569
References
2
Language
en

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