Cited by 48Endometriosis Research and TreatmentGenetic Associations and EpidemiologyEctopic Pregnancy Diagnosis and Management

Common variants upstream of KDR encoding VEGFR2 and in TTC39B associate with endometriosis

Open access
Steinthorsdottir, Valgerdur, Thorleifsson, Gudmar, Aradottir, Kristrun, Feenstra, Bjarke, Sigurdsson, Asgeir, Stefansdottir, Lilja, Kristinsdottir, Anna M., Zink, Florian +8 more·2016·Nature Communications

Abstract

We conducted a genome-wide association scan (GWAS) of endometriosis using 25.5 million sequence variants detected through whole-genome sequencing (WGS) of 8,453 Icelanders and imputed into 1,840 cases and 129,016 control women, followed by testing of associated variants in Danish samples. Here we report the discovery of a new endometriosis susceptibility locus on 4q12 (rs17773813[G], OR=1.28; P=3.8 × 10−11), upstream of KDR encoding vascular endothelial growth factor receptor 2 (VEGFR2). The variant correlates with disease severity (P=0.0046) when moderate/severe endometriosis cases are tested against minimal/mild cases. We further report association of rs519664[T] in TTC39B on 9p22 with endometriosis (P=4.8 × 10−10; OR=1.29). The involvement of KDR in endometriosis risk highlights the importance of the VEGF pathway in the pathogenesis of the disease.

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/ncomms12350

Cites

42 of 42 references verified0 citation errors · 0 not checkable

Statistics

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Cites

Flagged first, then by citations

Cited by

Sorted by citations

Authors
Steinthorsdottir, V., Thorleifsson, G., Aradottir, K., Feenstra, B., Sigurdsson, A., Stefansdottir, L., Kristinsdottir, A. M., Zink, F., Halldorsson, G. H., Munk Nielsen, N., Geller, F., Melbye, M., Gudbjartsson, D. F., Geirsson, R. T., Thorsteinsdottir, U., & Stefansson, K.
Affiliations
  • National University Hospital of Iceland (IS)
  • Statens Serum Institut (DK)
  • deCODE Genetics (Iceland) (IS)
Venue
Nature Communications
Published
2016-07-25
Volume
7
Issue
1
Pages
12350-12350
ISSN
2041-1723 (ISSN-L)
OpenAlex
W2489788488
Cited by
48
References
42
Citations by year
2026: 4 · 2025: 5 · 2024: 5 · 2023: 3 · 2022: 6 · 2021: 2 · 2020: 5 · 2019: 5 · 2018: 6 · 2017: 6 · 2016: 1
FWCI
7.97
Type
journal article
Language
en
Open access
Locations
  • Nature Communications (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • Research at the University of Copenhagen (University of Copenhagen) (publishedVersion, cc-by)
  • RePEc: Research Papers in Economics (submittedVersion)
  • DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
  • Hirsla (Landspítali University Hospital) (submittedVersion)
Funders
  • March of Dimes Foundation
  • Oak Foundation
  • National Research Foundation
  • Danmarks Grundforskningsfond
  • Augustinus Fonden
  • Egmont Fonden
Topics
  • Health Sciences › Medicine › Reproductive Medicine › Endometriosis Research and Treatment
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic Associations and Epidemiology
  • Health Sciences › Medicine › Public Health, Environmental and Occupational Health › Ectopic Pregnancy Diagnosis and Management
Keywords
endometriosis, genetic susceptibility, KDR, VEGFR2, VEGF pathway, disease severity, genome-wide association study, Icelandic population
MeSH terms
Chromosomes, Human, Pair 17, Endometriosis, Female, Humans, Lipoproteins, HDL, Neoplasm Proteins, Genetic Predisposition to Disease, Polymorphism, Single Nucleotide, Vascular Endothelial Growth Factor Receptor-2, Genome-Wide Association Study, Genetic Loci

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review