The DOI matches its Crossref record; 42 of the 42 references it cites were found in a registry or an index.
A novel mechanism of generating extracellular vesicles during apoptosis via a beads-on-a-string membrane structure
Open accessAbstract
Disassembly of apoptotic cells into smaller fragments (a form of extracellular vesicle called apoptotic bodies) can facilitate removal of apoptotic debris and intercellular communication. However, the mechanism underpinning this process is unclear. While observing monocytes undergoing apoptosis by time-lapse microscopy, we discovered a new type of membrane protrusion that resembles a ‘beads-on-a-string’ structure. Strikingly, the ‘beads’ are frequently sheared off the ‘string’ to form apoptotic bodies. Generation of apoptotic bodies via this mechanism can facilitate a sorting process and results in the exclusion of nuclear contents from apoptotic bodies. Mechanistically, generation of ‘beads-on-a-string’ protrusion is controlled by the level of actomyosin contraction and apoptopodia formation. Furthermore, in an unbiased drug screen, we identified the ability of sertraline (an antidepressant) to block the formation of ‘beads-on-a-string’ protrusions and apoptotic bodies. These data uncover a new mechanism of apoptotic body formation in monocytes and also compounds that can modulate this process.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Apoptosis: A Basic Biological Phenomenon with Wideranging Implications in Tissue Kinetics
Kerr, J. F. R., Wyllie, A. H., & Currie, A. R. (1972) · British Journal of Cancer · doi:10.1038/bjc.1972.33 · Cited by 15,725
Apoptosis: controlled demolition at the cellular level
Taylor, R. C., Cullen, S. P., & Martin, S. J. (2008) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2312 · Cited by 2,624
Syndecan–syntenin–ALIX regulates the biogenesis of exosomes
Baietti, M. F., Zhang, Z., Mortier, E., Melchior, A., Degeest, G., Geeraerts, A., Ivarsson, Y., Depoortere, F., Coomans, C., Vermeiren, E., et al. (2012) · Nature Cell Biology · doi:10.1038/ncb2502 · Cited by 1,899
Harding, C., Heuser, J., & Stahl, P. (1983) · The Journal of Cell Biology · doi:10.1083/jcb.97.2.329 · Cited by 1,775
Casciola-Rosen, L. A., Anhalt, G., & Rosen, A. (1994) · The Journal of experimental medicine · doi:10.1084/jem.179.4.1317 · Cited by 1,717
Heijnen, H. F. G., Schiel, A. E., Fijnheer, R., Geuze, H. J., & Sixma, J. J. (1999) · Blood · doi:10.1182/blood.v94.11.3791 · Cited by 1,487
Vesiclepedia: A Compendium for Extracellular Vesicles with Continuous Community Annotation
Kalra, H., Simpson, R. J., Ji, H., Aikawa, E., Altevogt, P., Askenase, P., Bond, V. C., Borràs, F. E., Breakefield, X., Budnik, V., et al. (2012) · PLoS Biology · doi:10.1371/journal.pbio.1001450 · Cited by 1,367
Self-citationDelivery of MicroRNA-126 by Apoptotic Bodies Induces CXCL12-Dependent Vascular Protection
Zernecke, A., Bidzhekov, K., Noels, H., Shagdarsuren, E., Gan, L., Denecke, B., Hristov, M., Köppel, T., Jahantigh, M. N., Lutgens, E., et al. (2009) · Science Signaling · doi:10.1126/scisignal.2000610 · Cited by 1,334
FunRich: An open access standalone functional enrichment and interaction network analysis tool
Pathan, M., Keerthikumar, S., Ang, C., Gangoda, L., Quek, C. Y. J., Williamson, N. A., Mouradov, D., Sieber, O. M., Simpson, R. J., Salim, A., et al. (2015) · PROTEOMICS · doi:10.1002/pmic.201400515 · Cited by 1,316
Self-citationMembrane blebbing during apoptosis results from caspase-mediated activation of ROCK I
Coleman, M. L., Sahai, E. A., Yeo, M., Bosch, M., Dewar, A., & Olson, M. F. (2001) · Nature Cell Biology · doi:10.1038/35070009 · Cited by 1,311
Pan, B. T., Teng, K., Wu, C., Adam, M., & Johnstone, R. M. (1985) · The Journal of cell biology · doi:10.1083/jcb.101.3.942 · Cited by 1,241
Apoptotic cell clearance: basic biology and therapeutic potential
Poon, I. K. H., Lucas, C. D., Rossi, A. G., & Ravichandran, K. S. (2014) · Nature Reviews Immunology · doi:10.1038/nri3607 · Cited by 1,223
Self-citationPannexin 1 channels mediate ‘find-me’ signal release and membrane permeability during apoptosis
Chekeni, F. B., Elliott, M. R., Sandilos, J. K., Walk, S. F., Kinchen, J. M., Lazarowski, E. R., Armstrong, A. J., Penuela, S., Laird, D. W., Salvesen, G. S., et al. (2010) · Nature · doi:10.1038/nature09413 · Cited by 1,120
Self-citationCaspase-3-mediated cleavage of ROCK I induces MLC phosphorylation and apoptotic membrane blebbing
Sebbagh, M., Renvoizé, C., Hamelin, J., Riché, N., Bertoglio, J., & Bréard, J. (2001) · Nature Cell Biology · doi:10.1038/35070019 · Cited by 915
Rudel, T., & Bokoch, G. M. (1997) · Science · doi:10.1126/science.276.5318.1571 · Cited by 747
Quah, B. J. C., Warren, H. S., & Parish, C. R. (2007) · Nature Protocols · doi:10.1038/nprot.2007.296 · Cited by 624
Kalra, H., Adda, C. G., Liem, M., Ang, C., Mechler, A., Simpson, R. J., Hulett, M. D., & Mathivanan, S. (2013) · PROTEOMICS · doi:10.1002/pmic.201300282 · Cited by 622
Self-citationRole of selective serotonin reuptake inhibitors in psychiatric disorders: a comprehensive review
Vaswani, M., Linda, F. K., & Ramesh, S. (2003) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/s0278-5846(02)00338-x · Cited by 612
Horizontal transfer of oncogenes by uptake of apoptotic bodies
Bergsmedh, A., Szeles, A., Henriksson, M., Bratt, A., Folkman, M. J., Spetz, A.-L., & Holmgren, L. (2001) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.101129998 · Cited by 550
Apoptotic Membrane Blebbing Is Regulated by Myosin Light Chain Phosphorylation
Mills, J. C., Stone, N. L., Erhardt, J., & Pittman, R. N. (1998) · The Journal of Cell Biology · doi:10.1083/jcb.140.3.627 · Cited by 497
Molecular mechanisms of late apoptotic/necrotic cell clearance
Poon, I. K. H., Hulett, M. D., & Parish, C. R. (2010) · Cell Death & Differentiation · doi:10.1038/cdd.2009.195 · Cited by 354
Self-citationSertraline versus other antidepressive agents for depression
Cipriani, A., La Ferla, T., Furukawa, T. A., Signoretti, A., Nakagawa, A., Churchill, R., McGuire, H., & Barbui, C. (2010) · Cochrane Database of Systematic Reviews · doi:10.1002/14651858.cd006117.pub4 · Cited by 299
Unexpected link between an antibiotic, pannexin channels and apoptosis
Poon, I. K. H., Chiu, Y.-H., Armstrong, A. J., Kinchen, J. M., Juncadella, I. J., Bayliss, D. A., & Ravichandran, K. S. (2014) · Nature · doi:10.1038/nature13147 · Cited by 276
Self-citationRubartelli, A., Poggi, A., & Zocchi, M. R. (1997) · European Journal of Immunology · doi:10.1002/eji.1830270812 · Cited by 254
Novel packages of viral and self-antigens are generated during apoptosis.
Rosen, A., Casciola-Rosen, L., & Ahearn, J. (1995) · The Journal of experimental medicine · doi:10.1084/jem.181.4.1557 · Cited by 246
How apoptotic cells aid in the removal of their own cold dead bodies
Wickman, G., Julian, L., & Olson, M. F. (2012) · Cell Death & Differentiation · doi:10.1038/cdd.2012.25 · Cited by 238
Sterile inflammation of endothelial cell-derived apoptotic bodies is mediated by interleukin-1α
Berda-Haddad, Y., Robert, S., Salers, P., Zekraoui, L., Farnarier, C., Dinarello, C. A., Dignat-George, F., & Kaplanski, G. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1116848108 · Cited by 232
Autoantigens are translocated into small apoptotic bodies during early stages of apoptosis
Schiller, M., Bekeredjian-Ding, I., Heyder, P., Blank, N., Ho, A. D., & Lorenz, H.-M. (2008) · Cell Death & Differentiation · doi:10.1038/sj.cdd.4402239 · Cited by 209
Zhai, B., Wu, C., Wang, L., Sachs, M. S., & Lin, X. (2012) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00212-12 · Cited by 205
Dying cell clearance and its impact on the outcome of tumor radiotherapy
Lauber, K., Ernst, A., Orth, M., Herrmann, M., & Belka, C. (2012) · Frontiers in Oncology · doi:10.3389/fonc.2012.00116 · Cited by 187
Phosphoinositide-mediated oligomerization of a defensin induces cell lysis
Poon, I. K., Baxter, A. A., Lay, F. T., Mills, G. D., Adda, C. G., Payne, J. A., Phan, T. K., Ryan, G. F., White, J. A., Veneer, P. K., et al. (2014) · eLife · doi:10.7554/elife.01808 · Cited by 185
Self-citationNovel Rho Kinase Inhibitors with Anti-inflammatory and Vasodilatory Activities
Doe, C. P., Bentley, R. G., Behm, D. J., Lafferty, R., Stavenger, R. A., Jung, D. K., Bamford, M. J., Panchal, T. A., Grygielko, E. T., Wright, L. L., et al. (2006) · Journal of Pharmacology and Experimental Therapeutics · doi:10.1124/jpet.106.110635 · Cited by 161
Vesicle trafficking plays a novel role in erythroblast enucleation
Keerthivasan, G., Small, S. H., Liu, H., Wickrema, A., & Crispino, J. D. (2010) · Blood · doi:10.1182/blood-2010-03-277426 · Cited by 114
Apoptosis paves the detour path for CD8 T cell activation against intracellular bacteria
Winau, F., Kaufmann, S. H. E., & Schaible, U. E. (2004) · Cellular Microbiology · doi:10.1111/j.1462-5822.2004.00408.x · Cited by 94
Chen, Y. S., Mathias, R. A., Mathivanan, S., Kapp, E. A., Moritz, R. L., Zhu, H., & Simpson, R. J. (2010) · Molecular & Cellular Proteomics · doi:10.1074/mcp.m110.001131 · Cited by 88
Self-citationInduced Apoptosis Supports Spread of Adenovirus Vectors in Tumors
Mi, J., Li, Z., Ni, S., Steinwaerder, D. S., & Lieber, A. (2001) · Human Gene Therapy · doi:10.1089/104303401750270995 · Cited by 83
Caspase‐mediated cleavage and activation of LIM‐kinase 1 and its role in apoptotic membrane blebbing
Tomiyoshi, G., Horita, Y., Nishita, M., Ohashi, K., & Mizuno, K. (2004) · Genes to Cells · doi:10.1111/j.1356-9597.2004.00745.x · Cited by 77
The Antidepressant Sertraline Targets Intracellular Vesiculogenic Membranes in Yeast
Rainey, M. M., Korostyshevsky, D., Lee, S. B., & Perlstein, E. O. (2010) · Genetics · doi:10.1534/genetics.110.117846 · Cited by 56
Poon, I. K. H., Hulett, M. D., & Parish, C. R. (2010) · Blood · doi:10.1182/blood-2009-07-234013 · Cited by 54
Self-citationWitasp, E., Uthaisang, W., Elenström‐Magnusson, C., Hanayama, R., Tanaka, M., Nagata, S., Orrenius, S., & Fadeel, B. (2007) · Cell Death and Differentiation · doi:10.1038/sj.cdd.4402096 · Cited by 28
Poon, I. K. H., Parish, C. R., & Hulett, M. D. (2010) · Journal of Leukocyte Biology · doi:10.1189/jlb.0210087 · Cited by 24
Self-citationSertraline versus other antidepressive agents for depression
Cipriani, A., Ferla, T. L., Furukawa, T. A., Signoretti, A., Nakagawa, A., Churchill, R. C., McGuire, H., & Barbui, C. (2010) · Cochrane Database of Systematic Reviews · doi:10.1002/14651858.cd006117.pub3 · Cited by 19
Cited by
Théry, C., Witwer, K. W., Aikawa, E., Alcaraz, M. J., Anderson, J. D., Andriantsitohaina, R., Antoniou, A., Arab, T., Archer, F., Atkin‐Smith, G. K., et al. (2018) · Journal of Extracellular Vesicles · doi:10.1080/20013078.2018.1535750 · Cited by 11,099
Self-citationGurunathan, S., Kang, M.-H., Jeyaraj, M., Qasim, M., & Kim, J.-H. (2019) · Cells · doi:10.3390/cells8040307 · Cited by 1,122
Apoptosis and apoptotic body: disease message and therapeutic target potentials
Xu, X., Lai, Y., & Hua, Z.-C. (2019) · Bioscience Reports · doi:10.1042/bsr20180992 · Cited by 909
Therapeutically harnessing extracellular vesicles
Cheng, L., & Hill, A. F. (2022) · Nature Reviews Drug Discovery · doi:10.1038/s41573-022-00410-w · Cited by 737
Apoptotic Cell-Derived Extracellular Vesicles: More Than Just Debris
Caruso, S., & Poon, I. K. H. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.01486 · Cited by 541
Self-citation
Metadata
- Authors
- Atkin-Smith, G. K., Tixeira, R., Paone, S., Mathivanan, S., Collins, C., Liem, M., Goodall, K. J., Ravichandran, K. S., Hulett, M. D., & Poon, I. K. H.
- Venue
- Nature Communications
- Published
- 2015-06-15
- Volume
- 6
- Issue
- 1
- Pages
- 7439-7439
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W2255264739
- Cited by
- 398
- References
- 42
- FWCI
- 8.88
- Type
- journal article
- Language
- en
- Open access
- gold
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.