Fast and accurate genotype imputation in genome-wide association studies through pre-phasing

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Items 601–700 of 1,003

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2. Polymorphisms in a Putative Enhancer at the 10q21.2 Breast Cancer Risk Locus Regulate NRBF2 Expression
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4. Effect of Genome-Wide Genotyping and Reference Panels on Rare Variants Imputation
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5. Bipolar disorder with comorbid binge eating history: A genome-wide association study implicates APOB
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6. Cross-ancestry genome-wide association studies of brain imaging phenotypes
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7. Impact of reference population on accuracy of imputation from 6K to 50K single nucleotide polymorphism chips in purebred and crossbreed beef cattle1
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10. Genome-wide association study of 1,5-anhydroglucitol identifies novel genetic loci linked to glucose metabolism
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11. Identification of new susceptibility loci associated with rheumatoid arthritis
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12. Rare disease research: Breaking the privacy barrier
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13. Classification and deep-learning–based prediction of Alzheimer disease subtypes by using genomic data
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14. Genetic insights into resting heart rate and its role in cardiovascular disease
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15. Heritability and Genome-Wide Association Studies for Hair Color in a Dutch Twin Family Based Sample
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16. Identifying Rare Variants Associated with Complex Traits via Sequencing
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17. A genome-wide expression quantitative trait loci analysis of proprotein convertase subtilisin/kexin enzymes identifies a novel regulatory gene variant for FURIN expression and blood pressure
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18. Association of an IGHV3-66 gene variant with Kawasaki disease
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19. Generative network models of altered structural brain connectivity in schizophrenia
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20. Systematic evaluation of the effects of genetic variants on PIWI-interacting RNA expression across 33 cancer types
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21. A pipeline for RNA-seq based eQTL analysis with automated quality control procedures
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22. Genome-wide association study for refractive astigmatism reveals genetic co-determination with spherical equivalent refractive error: the CREAM consortium
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23. Genome-wide association study of sporadic brain arteriovenous malformations
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24. Relationship of SNAP25 variants with schizophrenia and antipsychotic-induced weight change in large-scale schizophrenia patients
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25. Genome-wide Analysis Identifies Novel Loci Associated with Ovarian Cancer Outcomes: Findings from the Ovarian Cancer Association Consortium
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26. TET2 and CSMD1 genes affect SBP response to hydrochlorothiazide in never-treated essential hypertensives
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27. Imputation of coding variants in African Americans: better performance using data from the exome sequencing project
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28. Genetic variants affecting cross-sectional lung function in adults show little or no effect on longitudinal lung function decline
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29. GeneImp: Fast Imputation to Large Reference Panels Using Genotype Likelihoods from Ultralow Coverage Sequencing
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30. Polygenic risk for schizophrenia and associated brain structural changes: A systematic review
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31. Meta-analysis of GWAS in canola blackleg (Leptosphaeria maculans) disease traits demonstrates increased power from imputed whole-genome sequence
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32. Optimizing genomic prediction for Australian Red dairy cattle
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33. Development of genome-wide polygenic risk scores for lipid traits and clinical applications for dyslipidemia, subclinical atherosclerosis, and diabetes cardiovascular complications among East Asians
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34. Automatic landmarking identifies new loci associated with face morphology and implicates Neanderthal introgression in human nasal shape
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35. FASTKD2 is associated with memory and hippocampal structure in older adults
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36. A nonsense mutation in PLD4 is associated with a zinc deficiency-like syndrome in Fleckvieh cattle
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37. Identification of ST3AGL4, MFHAS1, CSNK2A2 and CD226 as loci associated with systemic lupus erythematosus (SLE) and evaluation of SLE genetics in drug repositioning
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38. Interval breast cancer is associated with other types of tumors
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39. Influence of Genetic Ancestry on Human Serum Proteome.
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40. Rest‐activity rhythms and cognitive impairment and dementia in older women: Results from the Women's Health Initiative
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41. Practical Use of Methods for Imputation of HLA Alleles from SNP Genotype Data
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42. Meta-analysis of genetic association with diagnosed Alzheimer’s disease identifies novel risk loci and implicates Abeta, Tau, immunity and lipid processing
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43. The efficient phasing and imputation pipeline of low‐coverage whole genome sequencing data using a high‐quality and publicly available reference panel in cattle
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44. Polymorphisms within theAPOBRgene are highly associated with milk levels of prognostic ketosis biomarkers in dairy cows
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45. Xanthine oxidase gene variants and their association with blood pressure and incident hypertension
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46. No Association of Coronary Artery Disease with X-Chromosomal Variants in Comprehensive International Meta-Analysis
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47. Genome-wide meta-analyses identifies novel taxane-induced peripheral neuropathy-associated loci
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48. Clinical and Genetic Risk Factors for Adverse Metabolic Outcomes in North American Testicular Cancer Survivors
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49. Cancer expression quantitative trait loci (eQTLs) can be determined from heterogeneous tumor gene expression data by modeling variation in tumor purity
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50. Genetic variation in the SIM1 locus is associated with erectile dysfunction
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51. Identifying tagging SNPs for African specific genetic variation from the African Diaspora Genome
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52. Effect direction meta-analysis of GWAS identifies extreme, prevalent and shared pleiotropy in a large mammal
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53. Shared genetic etiology between obsessive-compulsive disorder, obsessive-compulsive symptoms in the population, and insulin signaling
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54. Endogenization and excision of human herpesvirus 6 in human genomes
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57. Discovery and fine-mapping of kidney function loci in first genome-wide association study in Africans
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58. Airway Epithelial Expression Quantitative Trait Loci Reveal Genes Underlying Asthma and Other Airway Diseases
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59. Multiple Associated Variants Increase the Heritability Explained for Plasma Lipids and Coronary Artery Disease
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60. No evidence of large genetic effects on steroid response in asthma patients
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61. An intergenic risk locus containing an enhancer deletion in 2q35 modulates breast cancer risk by deregulating IGFBP5 expression
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62. Association of Thyroid Function Genetic Predictors With Atrial Fibrillation
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63. Regulatory sites for splicing in human basal ganglia are enriched for disease-relevant information
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64. Effects of Mu-Opiate Receptor Gene Polymorphism rs1799971 (A118G) on the Antidepressant and Dissociation Responses in Esketamine Nasal Spray Clinical Trials
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65. Testing Departure from Hardy-Weinberg Proportions
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66. Impact of genetic similarity on imputation accuracy
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67. Pharmacogenetic study of long-term response to interferon-β treatment in multiple sclerosis
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68. A Genome-Wide Association Study in isolated populations reveals new genes associated to common food likings
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69. Large-scale genomics unveil polygenic architecture of human cortical surface area
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70. Differential SLC6A4 methylation: a predictive epigenetic marker of adiposity from birth to adulthood
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71. Polygenic risk associated with post-traumatic stress disorder onset and severity
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72. Genome-Wide Association Study Reveals Genetic Link between Diarrhea-Associated Entamoeba histolytica Infection and Inflammatory Bowel Disease
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73. Prospective study of polygenic risk, protective factors, and incident depression following combat deployment in US Army soldiers
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74. NRXN1 is associated with enlargement of the temporal horns of the lateral ventricles in psychosis
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75. Novel susceptibility loci identified in a genome-wide association study of type 2 diabetes complications in population of Latvia
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76. Sequence-based GWAS meta-analyses for beef production traits
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77. Trachoma and Ocular Chlamydial Infection in the Era of Genomics
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78. Fine mapping of the celiac disease-associated LPP locus reveals a potential functional variant
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79. Clinical and Genetic Factors Associated With Cutaneous Squamous Cell Carcinoma in Kidney and Heart Transplant Recipients
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80. Brain cell-type shifts in Alzheimer’s disease, autism, and schizophrenia interrogated using methylomics and genetics
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81. Postmenopausal hormone therapy, type 2 diabetes mellitus, and brain volumes
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82. Assessing the role of insulin‐like growth factors and binding proteins in prostate cancer using Mendelian randomization: Genetic variants as instruments for circulating levels
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83. A genome wide association study identifies a lncRna as risk factor for pathological inflammatory responses in leprosy
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84. Genetic polymorphisms associated with pancreatic cancer survival: a genome‐wide association study
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85. Mendelian Randomization Analysis Reveals a Causal Influence of Circulating Sclerostin Levels on Bone Mineral Density and Fractures
    Jie Zheng, Winfried Maerz, Ingrid Gergei, Marcus Edi Kleber, Christiane Drechsler, Christoph Wanner, Vincent Mathias Brandenburg, Sjur Reppe, Kaare Morten Gautvik, Carolina Medina‐Gómez et al. · 2019 · Journal of Bone and Mineral Research
86. Alzheimer Disease Pathology-Associated Polymorphism in a Complex Variable Number of Tandem Repeat Region Within the MUC6 Gene, Near the AP2A2 Gene
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87. Genome-wide association study on Northern Chinese identifies KLF2 , DOT1L and STAB2 associated with systemic lupus erythematosus
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88. Sexual dimorphism in cancer: insights from transcriptional signatures in kidney tissue and renal cell carcinoma
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89. An imputed whole-genome sequence-based GWAS approach pinpoints causal mutations for complex traits in a specific swine population
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90. Identification of Shared and Asian‐Specific Loci for Systemic Lupus Erythematosus and Evidence for Roles of Type III Interferon Signaling and Lysosomal Function in the Disease: A Multi‐Ancestral Genome‐Wide Association Study
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