The DOI matches its Crossref record; 49 of the 49 references it cites were found in a registry or an index.
Bayesian inference with probabilistic population codes
Abstract
Recent psychophysical experiments indicate that humans perform near-optimal Bayesian inference in a wide variety of tasks, ranging from cue integration to decision making to motor control. This implies that neurons both represent probability distributions and combine those distributions according to a close approximation to Bayes' rule. At first sight, it would seem that the high variability in the responses of cortical neurons would make it difficult to implement such optimal statistical inference in cortical circuits. We argue that, in fact, this variability implies that populations of neurons automatically represent probability distributions over the stimulus, a type of code we call probabilistic population codes. Moreover, we demonstrate that the Poisson-like variability observed in cortex reduces a broad class of Bayesian inference to simple linear combinations of populations of neural activity. These results hold for arbitrary probability distributions over the stimulus, for tuning curves of arbitrary shape and for realistic neuronal variability.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“The agreement between this simple model and the data affirms the plausibility of the “Bayesian sequential sampling” framework (41).”
From Representation of Confidence Associated with a Decision by Neurons in the Parietal Cortex (2009) · cites this paper as [41]
In the citing paper
“From this perspective, our neural recordings support the idea of a “Bayesian brain” (66) and a neural mechanism of decision making that does not flip into a fixed point or attractor state but instead approximates the formation of a probability distribution (41, 67).”
From Representation of Confidence Associated with a Decision by Neurons in the Parietal Cortex (2009) · cites this paper as [41]
In the citing paper
“It is probably also consistent with other models that exploit a broader population of LIP neurons to encode posterior probability (22, 41).”
From Representation of Confidence Associated with a Decision by Neurons in the Parietal Cortex (2009) · cites this paper as [41]
Citations
Cites
Humans integrate visual and haptic information in a statistically optimal fashion
Ernst, M. O., & Banks, M. S. (2002) · Nature · doi:10.1038/415429a · Cited by 4,844
Neural Information Processing Systems
(2018) · The MIT Press eBooks · doi:10.7551/mitpress/11474.003.0014 · Cited by 3,776
Bayesian integration in sensorimotor learning
Körding, K. P., & Wolpert, D. M. (2004) · Nature · doi:10.1038/nature02169 · Cited by 2,004
(1994) · Choice Reviews Online · doi:10.5860/choice.31-4365 · Cited by 1,897
Normalization of cell responses in cat striate cortex
Heeger, D. J. (1992) · Visual Neuroscience · doi:10.1017/s0952523800009640 · Cited by 1,835
Neural Basis of a Perceptual Decision in the Parietal Cortex (Area LIP) of the Rhesus Monkey
Shadlen, M. N., & Newsome, W. T. (2001) · Journal of Neurophysiology · doi:10.1152/jn.2001.86.4.1916 · Cited by 1,755
Neural correlates of decision variables in parietal cortex
Platt, M. L., & Glimcher, P. W. (1999) · Nature · doi:10.1038/22268 · Cited by 1,721
Perception as Bayesian Inference
(1996) · doi:10.1017/cbo9780511984037 · Cited by 1,425
The statistical reliability of signals in single neurons in cat and monkey visual cortex
Tolhurst, D. J., Movshon, J. A., & Dean, A. F. (1983) · Vision Research · doi:10.1016/0042-6989(83)90200-6 · Cited by 1,002
Neural computations that underlie decisions about sensory stimuli
Gold, J. I., & Shadlen, M. N. (2001) · Trends in Cognitive Sciences · doi:10.1016/s1364-6613(00)01567-9 · Cited by 881
Noise characteristics and prior expectations in human visual speed perception
Stocker, A. A., & Simoncelli, E. P. (2006) · Nature Neuroscience · doi:10.1038/nn1669 · Cited by 809
Integration of Proprioceptive and Visual Position-Information: An Experimentally Supported Model
van Beers, R. J., Sittig, A. C., & Gon, J. J. D. V. D. (1999) · Journal of Neurophysiology · doi:10.1152/jn.1999.81.3.1355 · Cited by 742
A functional microcircuit for cat visual cortex
Douglas, R. J., & Martin, K. A. (1991) · The Journal of Physiology · doi:10.1113/jphysiol.1991.sp018733 · Cited by 736
Simple models for reading neuronal population codes.
Seung, H. S., & Sompolinsky, H. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.22.10749 · Cited by 623
Responses of neurons in macaque MT to stochastic motion signals
Britten, K. H., Shadlen, M. N., Newsome, W. T., & Movshon, J. A. (1993) · Visual Neuroscience · doi:10.1017/s0952523800010269 · Cited by 594
Optimal representation of sensory information by neural populations
Jazayeri, M., & Movshon, J. A. (2006) · Nature Neuroscience · doi:10.1038/nn1691 · Cited by 548
Computational Intelligence: Imitating Life
Marks, R. J., Żurada, J. M., & Robinson, C. J. (1994) · IEEE Press eBooks · Cited by 537
Data Fusion for Sensory Information Processing Systems
Clark, J. J., & Yuille, A. (1990) · Springer eBooks · doi:10.1007/978-1-4757-2076-1 · Cited by 519
Vector reconstruction from firing rates
Salinas, E., & Abbott, L. F. (1994) · Journal of Computational Neuroscience · doi:10.1007/bf00962720 · Cited by 488
The Contribution of Noise to Contrast Invariance of Orientation Tuning in Cat Visual Cortex
Anderson, J. S., Lampl, I., Gillespie, D. C., & Ferster, D. (2000) · Science · doi:10.1126/science.290.5498.1968 · Cited by 422
Reading population codes: a neural implementation of ideal observers
Denève, S., Latham, P. E., & Pouget, A. (1999) · Nature Neuroscience · doi:10.1038/11205 · Cited by 397
Self-citationProbabilistic Models of the Brain : Perception and Neural Function
Rao, R. P. N., Olshausen, B. A., & Lewicki, M. S. (2002) · Cited by 385
Probability distributions of optical flow
Simoncelli, E. P., Adelson, E. H., & Heeger, D. J. (2002) · IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings - IEEE Computer Society Conference on Computer Vision and Pattern Recognition/Proceedings · doi:10.1109/cvpr.1991.139707 · Cited by 374
Efficient computation and cue integration with noisy population codes
Denève, S., Latham, P. E., & Pouget, A. (2001) · Nature Neuroscience · doi:10.1038/90541 · Cited by 351
Self-citationModulation of neuronal activity by target uncertainty
Basso, M. A., & Wurtz, R. H. (1997) · Nature · doi:10.1038/37975 · Cited by 345
Orientation selectivity in the cat's striate cortex is invariant with stimulus contrast
Sclar, G., & Freeman, R. D. (1982) · Experimental Brain Research · doi:10.1007/bf00238641 · Cited by 339
Probabilistic Interpretation of Population Codes
Zemel, R. S., Dayan, P., & Pouget, A. (1998) · Neural Computation · doi:10.1162/089976698300017818 · Cited by 333
Self-citationEvaluating the Operations Underlying Multisensory Integration in the Cat Superior Colliculus
Stanford, T. R., Quessy, S., & Stein, B. E. (2005) · The Journal of Neuroscience · doi:10.1523/jneurosci.5095-04.2005 · Cited by 314
Probabilistic Interpretation of Population Codes
Zemel, R. S., Dayan, P., & Pouget, A. (1999) · The MIT Press eBooks · doi:10.7551/mitpress/4924.003.0011 · Cited by 308
Self-citationA Theory of How the Brain Might WorkPreprint
Poggio, T. (1990) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.1990.055.01.084 · Cited by 252
Bayesian Computation in Recurrent Neural Circuits
Rao, R. P. N. (2004) · Neural Computation · doi:10.1162/08997660460733976 · Cited by 252
Seriès, P., Latham, P. E., & Pouget, A. (2004) · Nature Neuroscience · doi:10.1038/nn1321 · Cited by 244
Self-citationProbability density estimation for the interpretation of neural population codes
Sanger, T. D. (1996) · Journal of Neurophysiology · doi:10.1152/jn.1996.76.4.2790 · Cited by 216
Nelson, J. I., Salin, P. A., Munk, M., Arzi, M., & Bullier, J. (1992) · Visual Neuroscience · doi:10.1017/s0952523800006349 · Cited by 191
Viewing Geometry Determines How Vision and Haptics Combine in Size Perception
Gepshtein, S., & Banks, M. S. (2003) · Current Biology · doi:10.1016/s0960-9822(03)00133-7 · Cited by 168
Computation and Neural Systems
Eeckman, F. H., & Bower, J. M. (1993) · Springer eBooks · doi:10.1007/978-1-4615-3254-5 · Cited by 162
Perrault, T. J., Vaughan, J. W., Stein, B. E., & Wallace, M. T. (2005) · Journal of Neurophysiology · doi:10.1152/jn.00926.2004 · Cited by 158
Neurotransmitter Release at Central Synapses
Stevens, C. F. (2003) · Neuron · doi:10.1016/s0896-6273(03)00643-3 · Cited by 154
Using Bayes' Rule to Model Multisensory Enhancement in the Superior Colliculus
Anastasio, T. J., Patton, P. E., & Belkacem-Boussaid, K. (2000) · Neural Computation · doi:10.1162/089976600300015547 · Cited by 151
Discrimination of planar surface slant from texture: human and ideal observers compared
Knill, D. C. (1998) · Vision Research · doi:10.1016/s0042-6989(97)00325-8 · Cited by 148
Parameter Extraction from Population Codes: A Critical Assessment
Snippe, H. P. (1996) · Neural Computation · doi:10.1162/neco.1996.8.3.511 · Cited by 115
Doubly Distributional Population Codes: Simultaneous Representation of Uncertainty and Multiplicity
Sahani, M., & Dayan, P. (2003) · Neural Computation · doi:10.1162/089976603322362356 · Cited by 93
PATTERN RECOGNITION AND THE RESPONSES OF SENSORY NEURONS*
Barlow, H. B. (1969) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.1969.tb14019.x · Cited by 88
Population Coding with Correlation and an Unfaithful Model
Wu, S., Nakahara, H., & Амари, Ш.-И. (2001) · Neural Computation · doi:10.1162/089976601300014349 · Cited by 86
The ‘Ideal Homunculus’: Statistical Inference from Neural Population Responses
Földiák, P. (1993) · Springer eBooks · doi:10.1007/978-1-4615-3254-5_9 · Cited by 83
High Response Reliability of Neurons in Primary Visual Cortex (V1) of Alert, Trained Monkeys
Gur, M., & Snodderly, D. M. (2005) · Cerebral Cortex · doi:10.1093/cercor/bhj032 · Cited by 82
Huys, Q. J. M., Zemel, R. S., Natarajan, R. D., & Dayan, P. (2007) · Neural Computation · doi:10.1162/neco.2007.19.2.404 · Cited by 70
Koechlin, É., Anton, J. L., & Burnod, Y. (1999) · Biological Cybernetics · doi:10.1007/s004220050502 · Cited by 60
Velocity Likelihoods in Biological and Machine Vision
Weiss, Y., & Fleet, D. J. (2002) · The MIT Press eBooks · doi:10.7551/mitpress/5583.003.0008 · Cited by 29
Flagged first, then by citations
Research works printed but not linked: 2
- Hinton, G.E. in Proceedings of the Ninth International Conference on Artificial Neural Network 1–6 (IEEE, London, England, 1999).
- Hoyer, P.O. & Hyvarinen, A. in Neural Information Processing Systems 277–284 (MIT Press, Cambridge, Massachusetts, 2003).
Cited by
Sorted by citations
The free-energy principle: a unified brain theory?
Friston, K. (2010) · Nature Reviews Neuroscience · doi:10.1038/nrn2787 · Cited by 8,120
Faisal, A. A., Selen, L. P. J., & Wolpert, D. M. (2008) · Nature Reviews Neuroscience · doi:10.1038/nrn2258 · Cited by 2,883
The free-energy principle: a rough guide to the brain?
Friston, K. (2009) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2009.04.005 · Cited by 1,831
The cognitive neuroscience of ageing
Grady, C. (2012) · Nature Reviews Neuroscience · doi:10.1038/nrn3256 · Cited by 1,286
Dynamic models of large-scale brain activity
Breakspear, M. (2017) · Nature Neuroscience · doi:10.1038/nn.4497 · Cited by 1,239
Metadata
- Authors
- Ma, W. J., Beck, J. M., Latham, P. E., & Pouget, A.
- Affiliations
- University of Rochester (US)
- National Hospital for Neurology and Neurosurgery (GB)
- Corresponding author
- Pouget, Alexandre
- Venue
- Nature Neuroscience
- Published
- 2006-10-22
- Volume
- 9
- Issue
- 11
- Pages
- 1432-1438
- ISSN
- 1097-6256 (ISSN-L)
- 1546-1726
- OpenAlex
- W2133877521
- Cited by
- 1,457
- References
- 49
- Citations by year
- 2026: 55 · 2025: 79 · 2024: 63 · 2023: 87 · 2022: 62 · 2021: 81 · 2020: 69 · 2019: 93 · 2018: 76 · 2017: 96 · 2016: 104 · 2015: 69 · 2014: 93 · 2013: 74 · 2012: 78
- FWCI
- 19.76
- Type
- journal article
- Language
- en
- Open access
- closed
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Neuroscience (publishedVersion)
- PubMed (publishedVersion)
- UCL Discovery (University College London) (submittedVersion)
- Funders
- National Institute of Mental Health (R01MH062447, T32MH019942, R01 MH62447, T32 MH19942)
- Topics
- Life Sciences › Neuroscience › Cognitive Neuroscience › Neural dynamics and brain function
- Life Sciences › Neuroscience › Cognitive Neuroscience › Visual perception and processing mechanisms
- Physical Sciences › Computer Science › Artificial Intelligence › Bayesian Modeling and Causal Inference
- Keywords
- Bayesian inference, neural population codes, neural variability, shot noise, Bayes' theorem, cue integration, cortical circuits, neural coding
- MeSH terms
- Algorithms, Bayes Theorem, Cerebral Cortex, Humans, Models, Neurological, Nerve Net, Models, Statistical, Normal Distribution, Poisson Distribution
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review