Cis-regulatory elements: molecular mechanisms and evolutionary processes underlying divergence

Cited by (1,246)

Items 501–600 of 1,246

1. Natural gene expression variation studies in yeast
   Dawn Anne Thompson, Francisco A. Cubillos · 2016 · Yeast
2. Molecular Mechanism of Mesenchyme Homeobox 1 in Transforming Growth Factor β1–Induced P311 Gene Transcription in Fibrosis
   Zhiyuan Wei, Chao Han, Haisheng Li, Weifeng He, Junyi Zhou, Hui Fen Dong, Yuzhang Wu, Yi Tian, Gaoxing Luo · 2020 · Frontiers in Molecular Biosciences
3. Genome-Wide Identification and Comprehensive Analyses of TCP Gene Family in Banana (Musa L.)
   Jessica Paola Sánchez Moreano, Xiaoping Xu, Cristina Aucapiña, Xiaohui Chen, Yuling Lin, Nigarish Munir, Zhongxiong Lai · 2021 · Tropical Plant Biology
4. Transcriptome shock in interspecific F1 allotriploid hybrids between Brassica species
   Chengtao Quan, Guoting Chen, Sijia Li, Zhibo Jia, Pugang Yu, Jinxing Tu, Jinxiong Shen, Bin Yi, Tingdong Fu, Cheng Dai et al. · 2022 · Journal of Experimental Botany
5. DNA clustering and genome complexity
   Francisco Dios, Guillermo Barturen, Ricardo Lebrón, Antonio Rueda, Michael Hackenberg, José Luis Tejera Oliver · 2014 · Computational Biology and Chemistry
6. A novel pairwise comparison method for in silico discovery of statistically significant cis-regulatory elements in eukaryotic promoter regions: Application to Arabidopsis
   Roohollah Shamloo‐Dashtpagerdi, Hooman Razi, Massumeh Aliakbari, Angelica Lindlöf, Mahdi Ebrahimi, Esmaeil Ebrahimie · 2014 · Journal of Theoretical Biology
7. Archaic hominin genomics provides a window into gene expression evolution
   Stephanie M. Yan, Rajiv C. McCoy · 2020 · Current Opinion in Genetics & Development
8. Climate explains population divergence in drought‐induced plasticity of functional traits and gene expression in a South African Protea
   Melis Akman, Jane E. Carlson, Andrew M. Latimer · 2020 · Molecular Ecology
9. Comprehensive analysis of LIM gene family in wheat reveals the involvement of TaLIM2 in pollen development
   Xuetong Yang, Yaning Bu, Fuqiang Niu, Yujie Cun, Lingli Zhang, Xiyue Song · 2021 · Plant Science
10. Cell-type-specific cis-regulatory divergence in gene expression and chromatin accessibility revealed by human-chimpanzee hybrid cells
    Ban Wang, Alexander L. Starr, Hunter B. Fraser · 2023 · eLife
11. Genome-wide analysis of the Pleurotus eryngii laccase gene (PeLac) family and functional identification of PeLac5
    Zihao Li, Yuanyuan Zhou, Congtao Xu, Jinlong Pan, Haikang Li, Yi Zhou, Yajie Zou · 2023 · AMB Express
12. The BTB-ZF gene Bm-mamo regulates pigmentation in silkworm caterpillars
    Songyuan Wu, Xiaoling Tong, Chenxing Peng, Jiangwen Luo, Chenghao Zhang, Kunpeng Lu, Chunlin Li, Xin Shun Ding, Xiaohui Duan, Yaru Lu et al. · 2023 · eLife
13. Whole-genome analysis reveals distinct adaptation signatures to diverse environments in Chinese domestic pigs
    Zhen Wang, Bangmin Song, Jianyu Yao, Xingzheng Li, Yan Zhang, Zhonglin Tang, Guoqiang Yi · 2024 · Journal of Animal Science and Biotechnology/Journal of animal science and biotechnology
14. Role of Rubus chingii BBX gene family in anthocyanin accumulation during fruit ripening
    Zhangting Xu, Guihua Zhang, Junyu Chen, Yuxin Ying, Lingtiao Yao, Xiaoxian Li, Jaime A. Teixeira da Silva, Zhenming Yu · 2024 · Frontiers in Plant Science
15. Evolution of p53 Transactivation Specificity through the Lens of a Yeast-Based Functional Assay
    Mattia Lion, Ivan Raimondi, Stefano Donati, Olivier Jousson, Yari Ciribilli, Alberto Inga · 2015 · PLoS ONE
16. No excess of cis -regulatory variation associated with intra-specific selection in wild pearl millet ( Cenchrus americanus )
    Bénédicte Rhoné, Cédric Mariac, Marie Couderc, Cécile Berthouly‐Salazar, Ousseini Issaka Salia, Yves Vigouroux · 2017 · Genome Biology and Evolution
17. An Essential Regulatory System Originating from Polygenic Transcriptional Rewiring of PhoP-PhoQ of Xanthomonas campestris
    Peng Bao-Yu, Yue Pan, Rujiao Li, Jin‐Wei Wei, Fang Liang, Li Wang, Fangfang Wang, Wei Qian · 2017 · Genetics
18. The molecular basis for the neofunctionalization of the juvenile hormone esterase duplication in Drosophila
    Davis H. Hopkins, Rahul Rane, Faisal Younus, Chris W. Coppin, Gunjan Pandey, Colin J. Jackson, John Graham Oakeshott · 2019 · Insect Biochemistry and Molecular Biology
19. Gene expression links genotype and phenotype during rapid adaptation
    Emily B. Josephs · 2020 · Molecular Ecology
20. Genetic association study of a novel indel polymorphism in HSPA1B with the risk of sudden cardiac death in the Chinese populations
    Zhenzhen Yang, Qing Zhang, Huan Yu, Hailin Du, Lijuan Li, Yan He, Shaohua Zhu, Chengtao Li, Suhua Zhang, Bin Luo et al. · 2020 · Forensic Science International
21. Uncovering Divergence in Gene Expression Regulation in the Adaptation of Yeast to Nitrogen Scarcity
    Carlos A. Villarroel, Macarena Bastías, Paulo Canessa, Francisco A. Cubillos · 2021 · mSystems
22. Signatures of natural selection in a foundation tree along Mediterranean climatic gradients
    Joao Carlos Filipe, Paul D. Rymer, Margaret Mary Byrne, Giles E. St. J. Hardy, Richard Mazanec, Collin W. Ahrens · 2022 · Molecular Ecology
23. Multidimensional chromatin profiling of zebrafish pancreas to uncover and investigate disease-relevant enhancers
    Renata Bordeira–Carriço, Joana Teixeira, Marta Duque, Mafalda Galhardo, Diogo M. Ribeiro, Rafael D. Acemel, Panos Firbas, Juan J. Tena, Ana Eufrásio, Joana Marques et al. · 2022 · Nature Communications
24. Evolution of a cis -Acting SNP That Controls Type VI Secretion in Vibrio cholerae
    Siu Lung Ng, Sophia Kammann, Gabi Steinbach, Tobias Hoffmann, Peter J. Yunker, Brian K. Hammer · 2022 · mBio
25. NOMe-HiC: joint profiling of genetic variant, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule
    Hailu Fu, Haizi Zheng, Xiaoting Chen, Matthew T. Weirauch, Louis J. Muglia, Li Wang, Yaping Liu · 2023 · Genome biology
26. Survivin a radiogenetic promoter for glioblastoma viral gene therapy independently from CArG motifs
    George E. Naoum, Zeng B. Zhu, Donald J. Buchsbaum, David T. Curiel, Waleed O. Arafat · 2017 · Clinical and Translational Medicine
27. A synthetic promoter for multi-stage expression to probe complementary functions of Plasmodium adhesins
    Dennis Klug, Jessica Kehrer, Friedrich Frischknecht, Mirko Singer · 2018 · Journal of Cell Science
28. Genome-Wide Identification, Structure Characterization, Expression Pattern Profiling, and Substrate Specificity of the Metal Tolerance Protein Family in Canavalia rosea (Sw.) DC
    Tao Zou, Ruoyi Lin, Lin Pu, Qiming Mei, Zheng‐Feng Wang, Shuguang Jian, Mei Zhang · 2021 · Plants
29. Comparative Proteome and Cis-Regulatory Element Analysis Reveals Specific Molecular Pathways Conserved in Dog and Human Brains
    Huilin Hong, Zhiguang Zhao, Xiahe Huang, Chao Guo, Hui Zhao, Guodong Wang, Ya‐Ping Zhang, Jianping Zhao, Jianhui Shi, Qingfeng Wu et al. · 2022 · Molecular & Cellular Proteomics
30. Asymmetric evolution of protein domains in the leucine-rich repeat receptor-like kinase (LRR-RLK) family of plant developmental coordinators
    Jarrett Man, Thomas Harrington, Kyra Lally, Madelaine Elisabeth Bartlett · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
31. NFIA regulates articular chondrocyte fatty acid metabolism and joint homeostasis
    Cuicui Wang, Liang Fang, Meng Shi, Xiangfeng Niu, Tiandao Li, Xiaofei Li, Kevin Cho, Yonghua He, Shuang Liu, Aiwu Lu et al. · 2025 · Science Translational Medicine
32. The GRN concept as a guide for evolutionary developmental biology
    Charles Yakov Feigin, Sha Li, Jorge A. Moreno, Ricardo Mallarino · 2022 · Journal of Experimental Zoology Part B Molecular and Developmental Evolution
33. CRISPR-Cas-mediated unfolded protein response control for enhancing plant stress resistance
    Bich Ngoc Vu, Tien Van Vu, Jae Yong Yoo, Ngan Thi Nguyen, Ki Seong Ko, Jae‐Yean Kim, Kyun Oh Lee · 2023 · Frontiers in Plant Science
34. Temperature-dependent gene regulatory divergence underlies local adaptation with gene flow in the Atlantic silverside
    Arne Jacobs, Jonathan P. Velotta, Anna Tigano, Aryn P. Wilder, Hannes Baumann, Nina Overgaard Therkildsen · 2024 · Evolution
35. Map-based cloning revealed BhAPRR2 gene regulating the black peel formation of mature fruit in wax gourd (Benincasa hispida)
    Xuling Zhai, Jinqiang Yan, Wenrui Liu, Zheng Li, Zhenqiang Cao, Ying Deng, Rongxiu Mo, Wang Baochen, Xiaoxin Cheng, Dasen Xie et al. · 2024 · Theoretical and Applied Genetics
36. Antagonizing cis- regulatory elements of a conserved flowering gene mediate developmental robustness
    Amy Lanctot, Anat Hendelman, Peter Udilovich, Gina M. Robitaille, Zachary B. Lippman · 2025 · Proceedings of the National Academy of Sciences
37. Genomic determinants, architecture, and constraints in drought-related traits in Corymbia calophylla
    Collin W. Ahrens, Kevin Murray, Richard Mazanec, Scott Ferguson, Jason G. Bragg, Ashley Jones, David Thomas Tissue, Margaret Mary Byrne, Justin Borevitz, Paul D. Rymer · 2024 · BMC Genomics
38. Cis‐regulatory sequence variation and association with Mycoplasma load in natural populations of the house finch (Carpodacus mexicanus)
    Niclas Backström, Daria Shipilina, Mozes P. K. Blom, Scott V. Edwards · 2013 · Ecology and Evolution
39. Human Expression QTLs Are Enriched in Signals of Environmental Adaptation
    Kaixiong Ye, Jian Lü, Srilakshmi M. Raj, Zhenglong Gu · 2013 · Genome Biology and Evolution
40. High-Throughput Identification ofCis-Regulatory Rewiring Events in Yeast
    Shrutii Sarda, Sridhar S. Hannenhalli · 2015 · Molecular Biology and Evolution
41. Car8 dorsal root ganglion expression and genetic regulation of analgesic responses are associated with a cis-eQTL in mice
    Roy C. Levitt, Gerald Y. Zhuang, Yuan Kang, Diana M. Erasso, Udita Upadhyay, Mehtap Özdemir, Eugene S. Fu, Konstantinos D. Sarantopoulos, Shad B. Smith, William D. Maixner et al. · 2017 · Mammalian Genome
42. Expression Changes of Structural Protein Genes May Be Related to Adaptive Skin Characteristics Specific to Humans
    Nami Arakawa, Daisuke Utsumi, Kenzo Takahashi, Akiko Matsumoto–Oda, Atunga Nyachieo, Daniel C. Chai, Ngalla Jillani, Hiroo Imai, Yoko Satta, Yohey Terai · 2019 · Genome Biology and Evolution
43. Characterization of cis-elements in hormonal stress-responsive genes in Oryza sativa
    Abbas Saidi, Zohreh Hajibarat · 2019 · Asia-Pacific Journal of Molecular Biology and Biotechnology
44. Modeling the Evolutionary Architectures of Transcribed Human Enhancer Sequences Reveals Distinct Origins, Functions, and Associations with Human Trait Variation
    Sarah Fong, John A. Capra · 2021 · Molecular Biology and Evolution
45. Genome-wide identification and expression analysis of MATE gene family in citrus fruit (Citrus clementina)
    Shengchao Liu, Yinchun Li, Heting Fang, Boyu Huang, Chenning Zhao, Chongde Sun, Shaojia Li, Kunsong Chen · 2022 · Genomics
46. Identification and Functional Characterization of the Transcription Factors AhR/ARNT in Dendroctonus armandi
    Bin W. Liu, Hui Chen · 2022 · Cells
47. Genome-wide identification, characterization, and validation of the bHLH transcription factors in grass pea
    Alsamman M. Alsamman, Mohamed Abdelsattar, Achraf El Allali, Khaled Hashem Radwan, Ahmed E. Nassar, Khaled H. Mousa, Ahmed Hussein, Morad M. Mokhtar, Mamdouh M. Abd El-Maksoud, Tawffiq Istanbuli et al. · 2023 · Frontiers in Genetics
48. Sparse generalized canonical correlation analysis for biological model integration: A genetic study of psychiatric disorders
    Mingon Kang, Baoju Zhang, Xiaoyong Wu, Chunyu Liu, Jean Gao · 2013 · Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)
49. Elucidation of Molecular Identity of the W3 Locus and Its Implication in Determination of Flower Colors in Soybean
    Gyu Tae Park, Jagadeesh Sundaramoorthy, Jeong‐Dong Lee, Jeong Hoe Kim, Hak Soo Seo, Jong Tae Song · 2015 · PLoS ONE
50. Identification and Computational Analysis of Gene Regulatory Elements
    Leila Taher, Leelavati Narlikar, Ivan Ovcharenko · 2015 · Cold Spring Harbor Protocols
51. Genome-wide identification and characterization of NCED gene family in soybean (Glycine max L.) and their expression profiles in response to various abiotic stress treatments
    Md Shohel Ul Islam, Pollob Shing, Mahin Ahmed, Fatema Tuz Zohra, Amina Rownaq, Suronjeet Kumar Paul, Shaikh Mizanur Rahman, Md. Abdur Rauf Sarkar · 2025 · PLoS ONE
52. Resequencing of a Pekin duck breeding population provides insights into the genomic response to short-term artificial selection
    Simeng Yu, Zihua Liu, Ming Li, Dong‐Ke Zhou, Ping Hua, Hong Cheng, Wenlei Fan, Yaxi Xu, Dapeng Liu, Suyun Liang et al. · 2023 · GigaScience
53. The role of conflict in the formation and maintenance of variant sex chromosome systems in mammals
    Jonathan J. Hughes, German Lagunas‐Robles, Polly Campbell A · 2024 · Journal of Heredity
54. Active enhancers: recent research advances and insights into disease
    Junyou Zhang, Qilin Wang, Jiaxin Liu, Yingying Duan, Zhaoshuo Liu, Ziyi Zhang, Chunyan Li · 2024 · Biology Direct
55. Genome-wide identification, phylogeny, evolutionary expansion, and expression analyses of ABC gene family in Castanea mollissima under temperature stress
    Liyang Yu, Yujuan Tian, Xiangyu Wang, Fei Cao, Haifen Wang, Ruimin Huang, Chunlei Guo, Haie Zhang, Jingzheng Zhang · 2024 · Plant Physiology and Biochemistry
56. From duplication to divergence: Single-cell insights into transcriptional and cis-regulatory landscapes in soybean
    Xiang Li, Xuan Zhang, Robert J. Schmitz · 2025 · The Plant Cell
57. A deep-time landscape of plant cis-regulatory sequence evolution
    Kirk Amundson, Anat Hendelman, Danielle Ciren, Hailong Yang, Amber E de Neve, Shai Tal, Adar Sulema, David P. Jackson, Madelaine Elisabeth Bartlett, Zachary B. Lippman et al. · 2026 · Science
58. A Simple Predictive Enhancer Syntax for Hindbrain Patterning Is Conserved in Vertebrate Genomes
    Joseph Grice, Boris Noyvert, Laura E. Doglio, Greg Elgar · 2015 · PLoS ONE
59. The ornamental fighting fish is the next model organism for genetic studies
    Gen Hua Yue, Le Wang, Fei Sun, Zituo Yang, Yubang Shen, Zining Meng, Yuzer Alfiko · 2022 · Reviews in Aquaculture
60. Single-cell multi-omics integration for unpaired data by a siamese network with graph-based contrastive loss
    Chaozhong Liu, Linhua Wang, Zhandong Liu · 2023 · BMC Bioinformatics
61. Comparative phylogenomic insights of KCS and ELO gene families in Brassica species indicate their role in seed development and stress responsiveness
    Uzair Muhammad Khan, Iqrar Ahmad Rana, Nabeel Shaheen, Qasim Saleem Raza, Hafiz Mamoon Rehman, Rizwan Maqbool, Iqrar Ahmad Khan, Rana Muhammad Atif · 2023 · Scientific Reports
62. Genome-Wide Identification and Expression Analysis of NCED Gene Family in Pear and Its Response to Exogenous Gibberellin and Paclobutrazol
    Jinming Liu, Xing Yuan, Shaowen Quan, Meng Zhang, Chao Kang, Caihua Guo, Zhongrong Zhang, Jianxin Niu · 2023 · International Journal of Molecular Sciences
63. A Quantitative, Genome-Wide Analysis in Drosophila Reveals Transposable Elements’ Influence on Gene Expression Is Species-Specific
    Marie Fablet, Judit Salces-Ortiz, Angelo Jacquet, Bianca Fraga Menezes, Corentin Dechaud, Philippe Veber, Rita Rebollo, Cristina P Vieira · 2023 · Genome Biology and Evolution
64. Genome-wide identification of MATE and ALMT genes and their expression profiling in mungbean (Vigna radiata L.) under aluminium stress
    Dharmendra Singh, Ankita Harishchandra Tripathi, Raktim Mitra, Jyotika Bhati, Varsha Rani, Jyoti Taunk, Deepti Singh, Rajendra Kumar Yadav, Manzer Hussain Siddiqui, Madan Pal · 2024 · Ecotoxicology and Environmental Safety
65. Evolution of the regulation of developmental gene expression in blind Mexican cavefish
    Julien Leclercq, Jorge Torres‐Paz, Maxime Policarpo, François Agnès, Sylvie Rétaux · 2024 · Development
66. Evolutionary Developmental Biology: Philosophical Issues
    Alan C. Love · 2014 · Springer eBooks
67. Genome structure predicts modular transcriptome responses to genetic and environmental conditions
    S. Mark, J. Weiss, Eesha Sharma, Ting-an Liu, Wei Wang, Julie M. Claycomb, A. Cutter · 2019 · bioRxiv
68. Functional genomics of parental care of insects
    Christopher B. Cunningham · 2020 · Hormones and Behavior
69. Joint reconstruction of cis -regulatory interaction networks across multiple tissues using single-cell chromatin accessibility data
    Kangning Dong, Shihua Zhang · 2020 · Briefings in Bioinformatics
70. Transcriptomic variation of the flower–fruit transition in Physalis and Solanum
    Huihui Gao, Jing Li, Lı Wang, Jisi Zhang, Chaoying He · 2020 · Planta
71. Exploiting Genomic Features to Improve the Prediction of Transcription Factor-Binding Sites in Plants
    Quentin Rivière, Massimiliano Corso, Madalina Ciortan, Grégoire Noël, Nathalie Verbruggen, Matthieu Defrance · 2022 · Plant and Cell Physiology
72. Recent mating‐system evolution in Eichhornia is accompanied by cis‐regulatory divergence
    Ramesh Arunkumar, Teresa I. Maddison, Spencer C. H. Barrett, Stephen Wright · 2016 · New Phytologist
73. Extensive phenotypic diversification coexists with little genetic divergence and a lack of population structure in the White Wagtail subspecies complex (Motacilla alba)
    Georgy А. Semenov, Evgeniy A. Koblik, Yaroslav A. Red’kin, Alexander V. Badyaev · 2018 · Journal of Evolutionary Biology
74. The evolution of gene regulation on sex chromosomes
    Daniel E. Shaw, Michael A. White · 2022 · Trends in Genetics
75. Altered interactions between cis-regulatory elements partially resolve BLADE-ON-PETIOLE genetic redundancy in Capsella rubella
    Thi Chi Tran, Karoline Mähl, Christian Kappel, Yuri Dakhiya, Arun Sampathkumar, Adrien Sicard, Michael Lenhard · 2024 · The Plant Cell
76. Comparative Analysis of C-repeat Binding Factors (CBFs) in Tomato and Arabidopsis
    Parviz Heidari · 2019 · Brazilian Archives of Biology and Technology
77. Mouse genomic and cellular annotations
    Helen Long, Richard Reeves, Michelle M. Simon · 2022 · Mammalian Genome
78. Genome-wide transcriptome profiling revealed biological macromolecules respond to low temperature stress in Brassica napus L
    Muhammad Azhar Hussain, Dan Luo, Liu Zeng, Xiaoyu Ding, Yong Cheng, Xiling Zou, Yan Lv, Guangyuan Lu · 2022 · Frontiers in Plant Science
79. Genome-wide analysis of the XTH gene family and functional analysis of DlXTH23.5/25 during early longan somatic embryogenesis
    Xiangwei Ma, Yan Chen, Mengyu Liu, Xiaodong Xue, Xueying Zhang, Luzhen Xu, Zhongxiong Lai, Yu‐Ling Lin · 2022 · Frontiers in Plant Science
80. DNMT3B overexpression downregulates genes with CpG islands, common motifs, and transcription factor binding sites that interact with DNMT3B
    Jaqueline Loaeza‐Loaeza, Ángel Josué Cerecedo-Castillo, Hugo Alberto Rodríguez-Ruiz, Yaneth Castro‐Coronel, Óscar Del Moral-Hernández, Félix Recillas Targa, Daniel Hernández‐Sotelo · 2022 · Scientific Reports
81. Integrating Transcriptomic and ChIP-Seq Reveals Important Regulatory Regions Modulating Gene Expression in Myometrium during Implantation in Pigs
    Weiwei Wang, Caiqin Cao, Botao Zhang, Feiyu Wang, Dadong Deng, Jianhua Cao, Hua Li, Mei Yu · 2022 · Biomolecules
82. Identification and characterization of Glycolate oxidase gene family in garden lettuce (Lactuca sativa cv. ‘Salinas’) and its response under various biotic, abiotic, and developmental stresses
    Mariyam Mariyam, Muhammad Shafiq, Saleha Sadiq, Qurban Ali, Muhammad Saleem Haider, Umer Habib, Daoud Ali, Muhammad Adnan Shahid · 2023 · Scientific Reports
83. Genome-wide identification, classification, and characterization of lectin gene superfamily in sweet orange (Citrus sinensis L.)
    Fee Faysal Ahmed, Farah Sumaiya Dola, Fatema Tuz Zohra, Shaikh Mizanur Rahman, Jesmin Naher Konak, Md. Abdur Rauf Sarkar · 2023 · PLoS ONE
84. Comprehensive analysis of annexin gene family and its expression in response to branching architecture and salt stress in crape myrtle
    Hui Wei, Jinxin Chen, Xingyue Zhang, Zixuan Lu, Bilin Lian, Guoyuan Liu, Yanhong Chen, Fei Zhong, Chunmei Yu, Jian Zhang · 2024 · BMC Plant Biology
85. Establishment of Transgenic Lines for Jumpstarter Method Using a Composite Transposon Vector in the Ladybird Beetle, Harmonia axyridis
    Hisashi Kuwayama, Hiroki Gotoh, Yusuke Konishi, Hideto Nishikawa, Toshinobu Yaginuma, Teruyuki Niimi · 2014 · PLoS ONE
86. Divergent evolution of cis-acting peroxisome proliferator-activated receptor elements that differentially control the tandemly duplicated fatty acid-binding protein genes, fabp1b.1 and fabp1b.2, in zebrafish
    Robert B. Laprairie, Eileen M. Denovan‐Wright, JONATHAN M. WRIGHT · 2016 · Genome
87. In Silico Analysis of Cis-Regulatory Elements on Co-Expressed Genes
    Parviz Heidari, Mostafa Ahmadizadeh, Hamid Najafi-Zarrini · 2015 · DergiPark (Istanbul University)
88. Adaptive Evolution and Epigenetics
    Ilkka Kronholm · 2017 · Elsevier eBooks
89. Identification and Conservation Analysis of Cis-Regulatory Elements in Pig Liver
    Yu Luan, Lu Zhang, Ming-Yang Hu, Yueyuan Xu, Ye Hou, Xin-Yun Li, Shu-Hong Zhao, Yun-Xia Zhao, Chang-Chun Li · 2019 · Genes
90. Systems Biology of Cold Adaptation in the Polyextremophilic Red Alga Galdieria sulphuraria
    Alessandro W. Rossoni, Andreas P.M. Weber · 2019 · Frontiers in Microbiology
91. Evaluating Chromatin Accessibility Differences Across Multiple Primate Species Using a Joint Modeling Approach
    Lee Edsall, Alejandro Berrío, William H. Majoros, Devjanee Swain-Lenz, Shauna Morrow, Yoichiro Shibata, Alexias Safi, Gregory A. Wray, Gregory E. Crawford, Andrew S. Allen · 2019 · Genome Biology and Evolution
92. Chromosomal Distribution of Genes Conferring Tolerance to Abiotic Stresses Versus That of Genes Controlling Resistance to Biotic Stresses in Plants
    Richard R.‐C. Wang · 2020 · International Journal of Molecular Sciences
93. TFBSPred: A functional transcription factor binding site prediction webtool for humans and mice
    Vasileios L. Zogopoulos, Katerina Spaho, Chaido Ntouka, Gerasimos Lappas, Ioannis Kyranis, Pantelis G. Bagos, Demetrios A. Spandidos, Ioannis Michalopoulos · 2021 · International Journal of Epigenetics
94. Heterologous expression and comparative characterization of vacuolar invertases from Cu-tolerant and non-tolerant populations of Elsholtzia haichowensis
    Zhong-Rui Xu, Chen Liu, Shenwen Cai, Luan Zhang, Zhiting Xiong · 2015 · Plant Cell Reports
95. TFforge utilizes large-scale binding site divergence to identify transcriptional regulators involved in phenotypic differences
    Björn E. Langer, Michael Hiller · 2018 · Nucleic Acids Research
96. Binding and Regulation of Transcription by Yeast Ste12 Variants To Drive Mating and Invasion Phenotypes
    Wei You Zhou, Michael W. Dorrity, Kerry L. Bubb, Christine Queitsch, Stanley Fields · 2019 · Genetics
97. Regulatory pathways of CYC‐like genes in patterning floral zygomorphy exemplified in Chirita pumila
    Jing Liu, Jie Wu, Xia Yang, Yin‐Zheng Wang · 2020 · Journal of Systematics and Evolution
98. Regulators of an ancient polyphenism evolved through episodic protein divergence and parallel gene radiations
    Joseph F. Biddle, Erik J. Ragsdale · 2020 · Proceedings of the Royal Society B Biological Sciences
99. Polygenic selection drives the evolution of convergent transcriptomic landscapes across continents within a Nearctic sister-species complex
    Clément Rougeux, Pierre‐Alexandre Gagnaire, Kim Præbel, Ole Seehausen C D, Louis Bernatchez · 2018 · bioRxiv (Cold Spring Harbor Laboratory)
100. Genome wide analysis for the identification and characterization of Superoxide-dismutase gene family in Rosa chinensis ascertains the role of salinity-responsive RcMSD1 protein and its interaction with peroxyl radical
     Muhammad Umar Rafique, Nazia Nahid, Farrukh Azeem, Sajid Fiaz, Kotb A. Attia, Roshan Zameer, Muhammad Salman Waqas, Muhammad Tahir ul Qamar, Asmaa M. Abushady · 2023 · Plant Stress