The DOI matches its Crossref record; 113 of the 113 references it cites were found in a registry or an index.
Experimental and analytical tools for studying the human microbiome
Open accessAbstract
The human microbiome substantially affects many aspects of human physiology, including metabolism, drug interactions and numerous diseases. This realization, coupled with ever-improving nucleotide sequencing technology, has precipitated the collection of diverse data sets that profile the microbiome. In the past 2 years, studies have begun to include sufficient numbers of subjects to provide the power to associate these microbiome features with clinical states using advanced algorithms, increasing the use of microbiome studies both individually and collectively. Here we discuss tools and strategies for microbiome studies, from primer selection to bioinformatics analysis.
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QIIME allows analysis of high-throughput community sequencing data
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Self-citationNaïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
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Metagenomic biomarker discovery and explanation
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Self-citationUCHIME improves sensitivity and speed of chimera detection
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Self-citationFastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
Price, M. N., Dehal, P. S., & Arkin, A. P. (2010) · PLoS ONE · doi:10.1371/journal.pone.0009490 · Cited by 14,894
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Cited by
The human microbiome: at the interface of health and disease
Cho, I., & Blaser, M. J. (2012) · Nature Reviews Genetics · doi:10.1038/nrg3182 · Cited by 3,449
Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy
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Self-citationFernandes, A. D., Reid, J. N., Macklaim, J. M., McMurrough, T. A., Edgell, D. R., & Gloor, G. B. (2014) · Microbiome · doi:10.1186/2049-2618-2-15 · Cited by 1,329
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Self-citationGut microbes and the brain: paradigm shift in neuroscience
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Metadata
- Authors
- Kuczynski, J., Lauber, C. L., Walters, W. A., Parfrey, L. W., Clemente, J. C., Gevers, D., & Knight, R.
- Venue
- Nature Reviews Genetics
- Published
- 2011-12-16
- Volume
- 13
- Issue
- 1
- Pages
- 47-58
- ISSN
- 1471-0056 (ISSN-L)
- 1471-0064
- OpenAlex
- W1985197139
- Cited by
- 709
- References
- 113
- FWCI
- 3.11
- Type
- journal article
- Language
- en
- Open access
- green
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- Kuczynski, J., Lauber, C. L., Walters, W. A., Parfrey, L. W., Clemente, J. C., Gevers, D., & Knight, R. (2012). Experimental and analytical tools for studying the human microbiome. Nature Reviews Genetics. https://doi.org/10.1038/nrg3129
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