The Janus-faced nature of the C2B domain is fundamental for synaptotagmin-1 function
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Synaptotagmin-1 functions as a Ca2+ sensor in neurotransmitter release and was proposed to act on both the synaptic vesicle and plasma membranes through interactions involving the Ca2+ binding top loops of its C(2) domains and the Ca2+-independent bottom face of the C(2)B domain. However, the functional importance of the C(2)B domain bottom face is unclear. We now show that mutating two conserved arginine residues at the C(2)B domain bottom face practically abolishes synchronous release in hippocampal neurons. Reconstitution experiments reveal that Ca2+-synaptotagmin-1 can dramatically stimulate the rate of SNARE-dependent lipid mixing, and that the two-arginine mutation strongly impairs this activity. These results demonstrate that synaptotagmin-1 function depends crucially on the bottom face of the C(2)B domain and strongly support the notion that synaptotagmin-1 triggers membrane fusion and neurotransmitter release by bringing the vesicle and plasma membranes together, much like the SNAREs do but in a Ca2+-dependent manner.
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Region I mutants retained some rescue ability, whereas region II mutants were nearly non-functional, including the R398Q, R399Q mutant.
“Interestingly, the region I mutants retained some rescue ability, in contrast to region II mutants that were nearly non-functional (Figs. 4a, b), including the R398Q, R399Q mutant as previously reported36.”
From Architecture of the synaptotagmin–SNARE machinery for neuronal exocytosis (2015) · cites this paper as [36]
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Cites
Synaptotagmin I: A major Ca2+ sensor for transmitter release at a central synapse
Geppert, M., Goda, Y., Hammer, R. E., Li, C., Rosahl, T. W., Stevens, C. F., & Südhof, T. C. (1994) · Cell · doi:10.1016/0092-8674(94)90556-8 · Cited by 1,483 · see citing works
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Research works printed but not linked: 51
- [1]Sudhof TC The synaptic vesicle cycle Annu Rev Neurosci 27 509 547 2004 15217342
- [2]Rizo J Chen X Arac D Unraveling the mechanisms of synaptotagmin and SNARE function in neurotransmitter release Trends Cell Biol 16 339 350 2006 16698267
- [3]Chapman ER How Does Synaptotagmin Trigger Neurotransmitter Release? Annu Rev Biochem 2008 18275379
- [4]Sutton RB Davletov BA Berghuis AM Sudhof TC Sprang SR Structure of the first C2 domain of synaptotagmin I: a novel Ca2+/phospholipid-binding fold Cell 80 929 938 1995 7697723
- [5]Shao X Davletov BA Sutton RB Sudhof TC Rizo J Bipartite Ca2+-binding motif in C2 domains of synaptotagmin and protein kinase C Science 273 248 251 1996 8662510
- [6]Ubach J Zhang X Shao X Sudhof TC Rizo J Ca2+ binding to synaptotagmin: how many Ca2+ ions bind to the tip of a C2-domain? EMBO J 17 3921 3930 1998 9670009 PMC1170727
- [7]Shao X Fernandez I Sudhof TC Rizo J Solution structures of the Ca2+-free and Ca2+-bound C2A domain of synaptotagmin I: does Ca2+ induce a conformational change? Biochemistry 37 16106 16115 1998 9819203
- [8]Fernandez I Three-dimensional structure of the synaptotagmin 1 c(2)b-domain. Synaptotagmin 1 as a phospholipid binding machine Neuron 32 1057 1069 2001 11754837
- [9]Chapman ER Davis AF Direct interaction of a Ca2+-binding loop of synaptotagmin with lipid bilayers J Biol Chem 273 13995 14001 1998 9593749
- [10]Zhang X Rizo J Sudhof TC Mechanism of phospholipid binding by the C2A-domain of synaptotagmin I Biochemistry 37 12395 12403 1998 9730811
- [11]Herrick DZ Sterbling S Rasch KA Hinderliter A Cafiso DS Position of synaptotagmin I at the membrane interface: cooperative interactions of tandem C2 domains Biochemistry 45 9668 9674 2006 16893168
- [12]Fernandez-Chacon R Synaptotagmin I functions as a calcium regulator of release probability Nature 410 41 49 2001 11242035
- [13]Rhee JS Augmenting neurotransmitter release by enhancing the apparent Ca2+ affinity of synaptotagmin 1 Proc Natl Acad Sci U S A 102 18664 18669 2005 16352718 PMC1311909
- [14]Brunger AT Structure and function of SNARE and SNARE-interacting proteins Q Rev Biophys 1 47 2005 16336742
- [15]Jahn R Scheller RH SNAREs--engines for membrane fusion Nat Rev Mol Cell Biol 7 631 643 2006 16912714
- [16]Bhalla A Chicka MC Tucker WC Chapman ER Ca(2+)-synaptotagmin directly regulates t-SNARE function during reconstituted membrane fusion Nat Struct Mol Biol 13 323 330 2006 16565726
- [17]Dai H Shen N Arac D Rizo J A Quaternary SNARE-Synaptotagmin-Ca(2+)-Phospholipid Complex in Neurotransmitter Release J Mol Biol 367 848 863 2007 17320903 PMC1855161
- [18]Martens S Kozlov MM McMahon HT How synaptotagmin promotes membrane fusion Science 316 1205 1208 2007 17478680
- [19]Mackler JM Drummond JA Loewen CA Robinson IM Reist NE The C(2)B Ca(2+)-binding motif of synaptotagmin is required for synaptic transmission in vivo Nature 418 340 344 2002 12110842
- [20]Nishiki T Augustine GJ Dual roles of the C2B domain of synaptotagmin I in synchronizing Ca2+-dependent neurotransmitter release J Neurosci 24 8542 8550 2004 15456828 PMC6729890
- [21]Robinson IM Ranjan R Schwarz TL Synaptotagmins I and IV promote transmitter release independently of Ca(2+) binding in the C(2)A domain Nature 418 336 340 2002 12110845
- [22]Fernandez-Chacon R Structure/function analysis of Ca2+ binding to the C2A domain of synaptotagmin 1 J Neurosci 22 8438 8446 2002 12351718 PMC6757773
- [23]Stevens CF Sullivan JM The synaptotagmin C2A domain is part of the calcium sensor controlling fast synaptic transmission Neuron 39 299 308 2003 12873386
- [24]Rickman C Conserved prefusion protein assembly in regulated exocytosis Mol Biol Cell 17 283 294 2006 16267273 PMC1345666
- [25]Li L Phosphatidylinositol phosphates as co-activators of Ca2+ binding to C2 domains of synaptotagmin 1 J Biol Chem 281 15845 15852 2006 16595652
- [26]Mackler JM Reist NE Mutations in the second C2 domain of synaptotagmin disrupt synaptic transmission at Drosophila neuromuscular junctions J Comp Neurol 436 4 16 2001 11413542
- [27]Arac D Close membrane-membrane proximity induced by Ca(2+)-dependent multivalent binding of synaptotagmin-1 to phospholipids Nat Struct Mol Biol 13 209 217 2006 16491093
- [29]Rosenmund C Stevens CF Definition of the readily releasable pool of vesicles at hippocampal synapses Neuron 16 1197 1207 1996 8663996
- [30]Tang J A complexin/synaptotagmin 1 switch controls fast synaptic vesicle exocytosis Cell 126 1175 1187 2006 16990140
- [31]Weber T SNAREpins: minimal machinery for membrane fusion Cell 92 759 772 1998 9529252
- [32]Tucker WC Weber T Chapman ER Reconstitution of Ca2+-regulated membrane fusion by synaptotagmin and SNAREs Science 304 435 438 2004 15044754
- [33]Pobbati AV Stein A Fasshauer D N- to C-terminal SNARE complex assembly promotes rapid membrane fusion Science 313 673 676 2006 16888141
- [34]Parlati F Rapid and efficient fusion of phospholipid vesicles by the alpha-helical core of a SNARE complex in the absence of an N-terminal regulatory domain Proc Natl Acad Sci U S A 96 12565 12570 1999 10535962 PMC22992
- [35]Stein A Radhakrishnan A Riedel D Fasshauer D Jahn R Synaptotagmin activates membrane fusion through a Ca(2+)-dependent trans interaction with phospholipids Nat Struct Mol Biol 14 904 911 2007 17891149
- [36]Ubach J The C2B domain of synaptotagmin I is a Ca2+-binding module Biochemistry 40 5854 5860 2001 11352720
- [37]Bhalla A Tucker WC Chapman ER Synaptotagmin isoforms couple distinct ranges of Ca2+, Ba2+, and Sr2+ concentration to SNARE-mediated membrane fusion Mol Biol Cell 16 4755 4764 2005 16093350 PMC1237081
- [38]Chicka MC Hui E Liu H Chapman ER Synaptotagmin arrests the SNARE complex before triggering fast, efficient membrane fusion in response to Ca2+ Nat Struct Mol Biol 15 827 835 2008 18622390 PMC2570314
- [39]Bowen ME Weninger K Ernst J Chu S Brunger AT Single-molecule studies of synaptotagmin and complexin binding to the SNARE complex Biophys J 89 690 702 2005 15821166 PMC1366567
- [40]Rizo J Rosenmund C Synaptic vesicle fusion Nat Struct Mol Biol 15 665 674 2008 18618940 PMC2519048
- [41]Shao X Synaptotagmin-syntaxin interaction: the C2 domain as a Ca2+-dependent electrostatic switch Neuron 18 133 142 1997 9010211
- [42]Giraudo CG Eng WS Melia TJ Rothman JE A clamping mechanism involved in SNARE-dependent exocytosis Science 313 676 680 2006 16794037
- [43]Schaub JR Lu X Doneske B Shin YK McNew JA Hemifusion arrest by complexin is relieved by Ca2+-synaptotagmin I Nat Struct Mol Biol 13 748 750 2006 16845390
- [44]Huntwork S Littleton JT A complexin fusion clamp regulates spontaneous neurotransmitter release and synaptic growth Nat Neurosci 10 1235 1237 2007 17873870
- [45]Zimmerberg J Akimov SA Frolov V Synaptotagmin: fusogenic role for calcium sensor? Nat Struct Mol Biol 13 301 303 2006 16715046
- [46]Parsegian VA Rand RP Stamatoff J Perturbation of membrane structure by uranyl acetate labeling Biophys J 33 475 477 1981 6164411 PMC1327443
- [47]Winiski AP McLaughlin AC McDaniel RV Eisenberg M McLaughlin S An experimental test of the discreteness-of-charge effect in positive and negative lipid bilayers Biochemistry 25 8206 8214 1986 3814579
- [48]Ubach J Garcia J Nittler MP Sudhof TC Rizo J Structure of the Janus-faced C2B domain of rabphilin Nat Cell Biol 1 106 112 1999 10559882
- [49]Deak F Rabphilin regulates SNARE-dependent re-priming of synaptic vesicles for fusion EMBO J 25 2856 2866 2006 16763567 PMC1500841
- [50]Xue M Distinct domains of complexin I differentially regulate neurotransmitter release Nat Struct Mol Biol 14 949 958 2007 17828276 PMC4894543
- [51]Lois C Hong EJ Pease S Brown EJ Baltimore D Germline transmission and tissue-specific expression of transgenes delivered by lentiviral vectors Science 295 868 872 2002 11786607
- [52]Chen X SNARE-Mediated Lipid Mixing Depends on the Physical State of the Vesicles Biophys J 90 2062 2074 2006 16361343 PMC1386784
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“Intriguingly, while an R398Q, R399Q mutation in region II that disrupts C 2 B–SNARE complex binding ( 47 ) strongly impairs neurotransmitter release ( 25 , 53 ), release is also impaired by a E295A, Y338W mutation in region I ( 25 ) that enhances binding ( 47 ).”
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- Authors
- Xue, M., Ma, C., Craig, T. K., Rosenmund, C., & Rizo, J.
- Affiliations
- Baylor College of Medicine (US)
- The University of Texas Southwestern Medical Center (US)
- Corresponding author
- Rosenmund, Christian
- Rizo, Josep
- Venue
- Nature Structural & Molecular Biology
- Published
- 2008-10-26
- Volume
- 15
- Issue
- 11
- Pages
- 1160-1168
- ISSN
- 1545-9985 (ISSN-L)
- 1545-9993
- PMC
- PMC2587052
- OpenAlex
- W2076881120
- Cited by
- 131
- References
- 1
- Citations by year
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- FWCI
- 5.11
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- www.springer.com/tdm (tdm)
- Locations
- Nature Structural & Molecular Biology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- National Institute of General Medical Sciences (GM 65364, R01GM065364)
- National Institute of Neurological Disorders and Stroke (NS40944, R01NS050655, NS50655, R01NS040944)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular transport and secretion
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Neuroscience and Neuropharmacology Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Lipid Membrane Structure and Behavior
- Keywords
- synaptotagmin-1, C2B domain, C2A domain, Ca2+ binding, neurotransmitter release, synchronous release, hippocampal neurons, membrane fusion, synaptic vesicles, plasma membrane, arginine residues
- MeSH terms
- Amino Acid Sequence, Animals, Arginine, Calcium, Cell Membrane, Cells, Cultured, Hippocampus, Humans, Lipids, Membrane Fusion, Models, Molecular, Molecular Sequence Data, Mutation, Neurons, Sequence Alignment, Protein Structure, Tertiary, Mice, Knockout, Patch-Clamp Techniques, SNARE Proteins, Synaptotagmin I, Mice, Rats
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