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The MARCHF6 E3 ubiquitin ligase acts as an NADPH sensor for the regulation of ferroptosis
Abstract
Ferroptosis is a unique form of cell death caused by excessive iron-dependent lipid peroxidation. The level of the anabolic reductant NADPH is a biomarker of ferroptosis sensitivity. However, specific regulators that detect cellular NADPH levels, thereby modulating downstream ferroptosis cascades, are largely unknown. We show here that the transmembrane endoplasmic reticulum MARCHF6 E3 ubiquitin ligase recognizes NADPH through its C-terminal regulatory region. This interaction upregulates the E3 ligase activity of MARCHF6, thus downregulating ferroptosis. We also found that MARCHF6 mediates the degradation of the key ferroptosis effectors ACSL4 and p53. Furthermore, inhibiting ferroptosis rescued the growth of MARCHF6-deficient tumours and peri-natal lethality of Marchf6 -/- mice. Together, these findings identify MARCHF6 as a previously unknown NADPH sensor in the ubiquitin system and a crucial regulator of ferroptosis.
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By sensing NADPH, MARCHF6 protects cells from ferroptosis by degrading pro-ferroptotic ASCL4 and P53, as well as SQLE.
“In this context, it is intriguing that Nguyen et al. [29] demonstrated that by sensing NADPH, MARCHF6 protects cells from ferroptosis by degrading pro-ferroptotic ASCL4 and P53, as well as the established target SQLE.”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
MARCHF6 is a direct sensor of cellular NADPH availability, owing to the presence of the C-terminal NADPH-binding MARA domain.
“MARCHF6 was recently implicated as a direct sensor of cellular NADPH availability, owing to the presence of the C-terminal NADPH-binding MARA domain of MARCHF6 [29].”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
High NADPH levels promote MARCHF6 ubiquitylation and ERAD of its targets (e.g., SQLE, PLIN2, and MARCHF6 itself), and low NADPH limits MARCHF6 activity and promotes their stability.
“This study suggested that high NADPH levels promote MARCHF6 ubiquitylation and ERAD of its targets e.g. SQLE, PLIN2, and MARCHF6 itself, and that reciprocally, low NADPH limits MARCHF6 activity and promotes their stability.”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
MARCHF6 is a sensor for cellular NADPH levels owing to residues 870-900 in its C-terminal MARA domain.
“Therefore, it is intriguing that a recent study implicated MARCHF6 as a sensor for cellular NADPH levels owing to residues 870–900 in its C-terminal MARCHF6-regulatory region (MARA) domain [29].”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
Loss of MARCHF6 is associated with a decrease in anti-ferroptotic SLC7A11, GPX4, and NRF2, likely a secondary effect.
“This was also associated with a decrease in the anti-ferroptotic SLC7A11, GPX4, and NRF2, which is likely a secondary effect, as it cannot be directly explained by the loss of E3 ligase activity.”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
Global ablation of Marchf6 in mice results in a marked shift from the expected Mendelian birth distribution.
“In line with it having an important physiological role, global ablation of Marchf6 in mice results in a marked shift from the expected Mendelian birth distribution (this study and [29]).”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
Loss of MARCHF6 increases levels of ASCL4, P53, and SQLE and enhances ferroptosis in an NADPH-dependent manner in vitro.
“Conversely, loss of MARCHF6, increased their level and enhanced ferroptosis in an NADPH-dependent manner in vitro.”
From Loss of the E3 ubiquitin ligase MARCHF6 alters hepatic lipid metabolism and drives spontaneous hepatosteatosis (2026) · cites this paper as [29]
Citations
Cites
Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
ACSL4 dictates ferroptosis sensitivity by shaping cellular lipid composition
Doll, S., Proneth, B., Tyurina, Y. Y., Panzilius, E., Kobayashi, S., Ingold, I., Irmler, M., Beckers, J., Aichler, M., Walch, A., et al. (2017) · Nature Chemical Biology · doi:10.1038/nchembio.2239 · Cited by 4,293
Ferroptosis as a p53-mediated activity during tumour suppression
Jiang, L., Kon, N., Li, T., Wang, S.-J., Su, T., Hibshoosh, H., Baer, R., & Gu, W. (2015) · Nature · doi:10.1038/nature14344 · Cited by 3,398
Sun, X., Ou, Z., Chen, R., Niu, X., Chen, D., Kang, R., & Tang, D. (2016) · Hepatology · doi:10.1002/hep.28251 · Cited by 2,012
The emerging role of ferroptosis in inflammation
Sun, Y., Chen, P., Zhai, B., Zhang, M., Xiang, Y., Fang, J., Xu, S., Gao, Y., Chen, X., Sui, X., et al. (2020) · Biomedicine & Pharmacotherapy · doi:10.1016/j.biopha.2020.110108 · Cited by 739
N-degron and C-degron pathways of protein degradation
Varshavsky, A. (2019) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1816596116 · Cited by 544
Glutathione peroxidase 4 and vitamin E cooperatively prevent hepatocellular degeneration
Carlson, B. A., Tobe, R., Yefremova, E., Tsuji, P. A., Hoffmann, V. J., Schweizer, U., Gladyshev, V. N., Hatfield, D. L., & Conrad, M. (2016) · Redox Biology · doi:10.1016/j.redox.2016.05.003 · Cited by 316
Foresti, O., Ruggiano, A., Hannibal-Bach, H. K., Ejsing, C. S., & Carvalho, P. (2013) · eLife · doi:10.7554/elife.00953 · Cited by 205
Flagged first, then by citations
Research works printed but not linked: 39
- Jiang, X., Stockwell, B. R. & Conrad, M. Ferroptosis: mechanisms, biology and role in disease. Nat. Rev. Mol. Cell Biol. 22, 266–282 (2021). · DOI
- Stockwell, B. R., Jiang, X. & Gu, W. Emerging mechanisms and disease relevance of ferroptosis. Trends Cell Biol. 30, 478–490 (2020). · DOI
- Dixon, S. J. & Stockwell, B. R. The hallmarks of ferroptosis. Annu. Rev. Canc Biol. 3, 35–54 (2019). · DOI
- Poltorack, C. D. & Dixon, S. J. Understanding the role of cysteine in ferroptosis: progress & paradoxes. FEBS J. 289, 374–385 (2022). · DOI
- Ju, H. Q., Lin, J. F., Tian, T., Xie, D. & Xu, R. H. NADPH homeostasis in cancer: functions, mechanisms and therapeutic implications. Signal Transduct. Target Ther. 5, 231 (2020). · DOI
- Shimada, K., Hayano, M., Pagano, N. C. & Stockwell, B. R. Cell-line selectivity improves the predictive power of pharmacogenomic analyses and helps identify NADPH as biomarker for ferroptosis sensitivity. Cell Chem. Biol. 23, 225–235 (2016). · DOI
- Ding, C. C. et al. MESH1 is a cytosolic NADPH phosphatase that regulates ferroptosis. Nat. Metab. 2, 270–277 (2020). · DOI
- Kreft, S. G., Wang, L. & Hochstrasser, M. Membrane topology of the yeast endoplasmic reticulum-localized ubiquitin ligase Doa10 and comparison with its human ortholog TEB4 (MARCH-VI). J. Biol. Chem. 281, 4646–4653 (2006). · DOI
- Lin, H., Li, S. & Shu, H. B. The membrane-associated MARCH E3 ligase family: emerging roles in immune regulation. Front. Immunol. 10, 1751 (2019). · DOI · Paper page
- Scott, N. A., Sharpe, L. J. & Brown, A. J. The E3 ubiquitin ligase MARCHF6 as a metabolic integrator in cholesterol synthesis and beyond. Biochim. Biophys. Acta Mol. Cell. Biol. Lipids 1866, 158837 (2021). · DOI · Paper page
- Hassink, G. et al. TEB4 is a C4HC3 RING finger-containing ubiquitin ligase of the endoplasmic reticulum. Biochem. J. 388, 647–655 (2005). · DOI
- Zelcer, N. et al. The E3 ubiquitin ligase MARCH6 degrades squalene monooxygenase and affects 3-hydroxy-3-methyl-glutaryl coenzyme A reductase and the cholesterol synthesis pathway. Mol. Cell. Biol. 34, 1262–1270 (2014). · DOI · Paper page
- Nguyen, K. T. et al. N-terminal acetylation and the N-end rule pathway control degradation of the lipid droplet protein PLIN2. J. Biol. Chem. 294, 379–388 (2019). · DOI · Paper page
- Park, S. E. et al. Control of mammalian G protein signaling by N-terminal acetylation and the N-end rule pathway. Science 347, 1249–1252 (2015). · DOI
- Hwang, C. S., Shemorry, A. & Varshavsky, A. N-terminal acetylation of cellular proteins creates specific degradation signals. Science 327, 973–977 (2010). · DOI · Paper page
- Nguyen, K. T., Mun, S. H., Lee, C. S. & Hwang, C. S. Control of protein degradation by N-terminal acetylation and the N-end rule pathway. Exp. Mol. Med. 50, 91 (2018). · DOI
- Schultz, M. L. et al. Coordinate regulation of mutant NPC1 degradation by selective ER autophagy and MARCH6-dependent ERAD. Nat. Commun. 9, 3671 (2018). · DOI
- Stefanovic-Barrett, S. et al. MARCH6 and TRC8 facilitate the quality control of cytosolic and tail-anchored proteins. EMBO Rep. 19, e45603 (2018). · DOI
- Zattas, D., Berk, J. M., Kreft, S. G. & Hochstrasser, M. A Conserved C-terminal element in the yeast Doa10 and human MARCH6 ubiquitin ligases required for selective substrate degradation. J. Biol. Chem. 291, 12105–12118 (2016). · DOI
- Slenter, D. N. et al. WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research. Nucleic Acids Res. 46, D661–D667 (2018). · DOI
- Wang, H. et al. Characterization of ferroptosis in murine models of hemochromatosis. Hepatology 66, 449–465 (2017). · DOI
- Mockli, N. et al. Yeast split-ubiquitin-based cytosolic screening system to detect interactions between transcriptionally active proteins. Biotechniques 42, 725–730 (2007). · DOI
- Hunt, T., Herbert, P., Campbell, E. A., Delidakis, C. & Jackson, R. J. The use of affinity chromatography on 2′5′ ADP-sepharose reveals a requirement for NADPH, thioredoxin and thioredoxin reductase for the maintenance of high protein synthesis activity in rabbit reticulocyte lysates. Eur. J. Biochem. 131, 303–311 (1983). · DOI
- Garcia-Bermudez, J. et al. Squalene accumulation in cholesterol auxotrophic lymphomas prevents oxidative cell death. Nature 567, 118–122 (2019). · DOI
- Dixon, S. J. et al. Pharmacological inhibition of cystine–glutamate exchange induces endoplasmic reticulum stress and ferroptosis. eLife 3, e02523 (2014). · DOI · Paper page
- Yang, W. S. et al. Regulation of ferroptotic cancer cell death by GPX4. Cell 156, 317–331 (2014). · DOI · Paper page
- Zheng, X. et al. Restructuring of the dinucleotide-binding fold in an NADP(H) sensor protein. Proc. Natl Acad. Sci. USA 104, 8809–8814 (2007). · DOI
- Kempf, A., Song, S. M., Talbot, C. B. & Miesenbock, G. A potassium channel β-subunit couples mitochondrial electron transport to sleep. Nature 568, 230–234 (2019). · DOI
- Jiang, P. et al. p53 regulates biosynthesis through direct inactivation of glucose-6-phosphate dehydrogenase. Nat. Cell Biol. 13, 310–316 (2011). · DOI
- Wu, K. C., Cui, J. Y. & Klaassen, C. D. Beneficial role of Nrf2 in regulating NADPH generation and consumption. Toxicol. Sci. 123, 590–600 (2011). · DOI · Paper page
- Zhao, J. et al. Nrf2 mediates metabolic reprogramming in non-small cell lung cancer. Front. Oncol. 10, 578315 (2020). · DOI
- Chen, X., Yu, C., Kang, R., Kroemer, G. & Tang, D. Cellular degradation systems in ferroptosis. Cell Death Differ. 28, 1135–1148 (2021). · DOI
- Coates, H. W., Chua, N. K. & Brown, A. J. Consulting prostate cancer cohort data uncovers transcriptional control: regulation of the MARCH6 gene. Biochim. Biophys. Acta Mol. Cell. Biol. Lipids 1864, 1656–1668 (2019). · DOI
- Florian, R. T. et al. Unstable TTTTA/TTTCA expansions in MARCH6 are associated with familial adult myoclonic epilepsy type 3. Nat. Commun. 10, 4919 (2019). · DOI
- Sun, J. et al. MARCH6 promotes hepatocellular carcinoma development through up-regulation of ATF2. BMC Cancer 21, 827 (2021). · DOI
- Coates, H. W., Capell-Hattam, I. M. & Brown, A. J. The mammalian cholesterol synthesis enzyme squalene monooxygenase is proteasomally truncated to a constitutively active form. J. Biol. Chem. 296, 100731 (2021). · DOI
- Kim, D., Langmead, B. & Salzberg, S. L. HISAT: a fast spliced aligner with low memory requirements. Nat. Methods 12, 357–360 (2015). · DOI · Paper page
- Pertea, M. et al. StringTie enables improved reconstruction of a transcriptome from RNA-seq reads. Nat. Biotechnol. 33, 290–295 (2015). · DOI
- Gietz, R. D. & Schiestl, R. H. High-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method. Nat. Protoc. 2, 31–34 (2007). · DOI
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Sachdev, V., van Loon, N. M., Kingma, J., Ottenhoff, R., Tan, J. M. E., van den Berg, M., Duijst, S., Jongejan, A., Levels, J. H. M., Rensen, P. C. N., et al. (2026) · Molecular Metabolism · doi:10.1016/j.molmet.2026.102379 · Cited by 1
Metadata
- Authors
- Nguyen, K. T., Mun, S.-H., Yang, J., Lee, J., Seok, O.-H., Kim, E., Kim, D., An, S. Y., Seo, D.-Y., Suh, J.-Y., Lee, Y., & Hwang, C.-S.
- ORCID
- Venue
- Nature Cell Biology
- Published
- 2022-08
- Volume
- 24
- Issue
- 8
- Pages
- 1239-1251
- ISSN
- 1465-7392
- 1476-4679
- Cited by
- 92
- References
- 8
- Language
- en
- Funders
- The Korean Government
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