Cited by 40Cellular Mechanics and InteractionsProtein Kinase Regulation and GTPase SignalingProtein Structure and Dynamics

The DOI matches its Crossref record; its reference list is not available.

Cortactin stabilizes actin branches by bridging activated Arp2/3 to its nucleated actin filament

Open access

Published version of a preprint

Abstract

Regulation of the assembly and turnover of branched actin filament networks nucleated by the Arp2/3 complex is essential during many cellular processes, including cell migration and membrane trafficking. Cortactin is important for actin branch stabilization, but the mechanism by which this occurs is unclear. Given this, we determined the structure of vertebrate cortactin-stabilized Arp2/3 actin branches using cryogenic electron microscopy. We find that cortactin interacts with the new daughter filament nucleated by the Arp2/3 complex at the branch site, rather than the initial mother actin filament. Cortactin preferentially binds activated Arp3. It also stabilizes the F-actin-like interface of activated Arp3 with the first actin subunit of the new filament, and its central repeats extend along successive daughter-filament subunits. The preference of cortactin for activated Arp3 explains its retention at the actin branch and accounts for its synergy with other nucleation-promoting factors in regulating branched actin network dynamics.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1038/s41594-023-01205-2

Cites

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

No citation lists for this paper

No citation lists for this paper yet — checked again daily.

References 71 · Cited by 40

Research works printed but not linked: 67

  1. Rottner, K., Faix, J., Bogdan, S., Linder, S. & Kerkhoff, E. Actin assembly mechanisms at a glance. J. Cell Sci. 130, 3427–3435 (2017). · DOI
  2. Gautreau, A. M., Fregoso, F. E., Simanov, G. & Dominguez, R. Nucleation, stabilization, and disassembly of branched actin networks. Trends Cell Biol. 32, 421–432 (2022). · DOI
  3. Svitkina, T. M. Actin cell cortex: structure and molecular organization. Trends Cell Biol. 30, 556–565 (2020). · DOI
  4. Ulferts, S., Prajapati, B., Grosse, R. & Vartiainen, M. K. Emerging properties and functions of actin and actin filaments inside the nucleus. Cold Spring Harb. Perspect. Biol. 13, a040121 (2021). · DOI
  5. Banerjee, S., Gardel, M. L. & Schwarz, U. S. The actin cytoskeleton as an active adaptive material. Annu. Rev. Condens. Matter Phys. 11, 421–439 (2020). · DOI
  6. Kadzik, R. S., Homa, K. E. & Kovar, D. R. F-actin cytoskeleton network self-organization through competition and cooperation. Annu. Rev. Cell Dev. Biol. 36, 35–60 (2020). · DOI · Paper page
  7. Bieling, P. & Rottner, K. From WRC to Arp2/3: collective molecular mechanisms of branched actin network assembly. Curr. Opin. Cell Biol. 80, 102156 (2023). · DOI
  8. Machesky, L. M. et al. Scar, a WASp-related protein, activates nucleation of actin filaments by the Arp2/3 complex. Proc. Natl Acad. Sci. USA 96, 3739–3744 (1999). · DOI · Paper page
  9. Chou, S. Z., Chatterjee, M. & Pollard, T. D. Mechanism of actin filament branch formation by Arp2/3 complex revealed by a high-resolution cryo-EM structure of the branch junction. Proc. Natl Acad. Sci. USA 119, e2206722119 (2022). · DOI
  10. Shaaban, M., Chowdhury, S. & Nolen, B. J. Cryo-EM reveals the transition of Arp2/3 complex from inactive to nucleation-competent state. Nat. Struct. Mol. Biol. 27, 1009–1016 (2020). · DOI
  11. Miki, H. & Takenawa, T. Direct binding of the verprolin-homology domain in N-WASP to actin is essential for cytoskeletal reorganization. Biochem. Biophys. Res. Commun. 243, 73–78 (1998). · DOI
  12. Higgs, H. N., Blanchoin, L. & Pollard, T. D. Influence of the C terminus of Wiskott–Aldrich syndrome protein (WASp) and the Arp2/3 complex on actin polymerization. Biochemistry 38, 15212–15222 (1999). · DOI
  13. Kelly, A. E., Kranitz, H., Dötsch, V. & Mullins, R. D. Actin binding to the central domain of WASP/Scar proteins plays a critical role in the activation of the Arp2/3 complex. J. Biol. Chem. 281, 10589–10597 (2006). · DOI
  14. Panchal, S. C., Kaiser, D. A., Torres, E., Pollard, T. D. & Rosen, M. K. A conserved amphipathic helix in WASP/Scar proteins is essential for activation of Arp2/3 complex. Nat. Struct. Biol. 10, 591–598 (2003). · DOI
  15. Chereau, D. et al. Actin-bound structures of Wiskott–Aldrich syndrome protein (WASP)-homology domain 2 and the implications for filament assembly. Proc. Natl Acad. Sci. USA 102, 16644–16649 (2005). · DOI
  16. Ti, S. C., Jurgenson, C. T., Nolen, B. J. & Pollard, T. D. Structural and biochemical characterization of two binding sites for nucleation-promoting factor WASp-VCA on Arp2/3 complex. Proc. Natl Acad. Sci. USA 108, E463–E471 (2011). · DOI
  17. Padrick, S. B., Doolittle, L. K., Brautigam, C. A., King, D. S. & Rosen, M. K. Arp2/3 complex is bound and activated by two WASP proteins. Proc. Natl Acad. Sci. USA 108, E472–E479 (2011). · DOI
  18. Gaucher, J. F. et al. Interactions of isolated C-terminal fragments of neural Wiskott–Aldrich syndrome protein (N-WASP) with actin and Arp2/3 complex. J. Biol. Chem. 287, 34646–34659 (2012). · DOI
  19. Zimmet, A. et al. Cryo-EM structure of NPF-bound human Arp2/3 complex and activation mechanism. Sci. Adv. 6, eaaz7651 (2020). · DOI
  20. Uruno, T., Liu, J., Li, Y., Smith, N. & Zhan, X. Sequential interaction of actin-related proteins 2 and 3 (Arp2/3) complex with neural Wiscott–Aldrich syndrome protein (N-WASP) and cortactin during branched actin filament network formation. J. Biol. Chem. 278, 26086–26093 (2003). · DOI
  21. Helgeson, L. A. & Nolen, B. J. Mechanism of synergistic activation of Arp2/3 complex by cortactin and N-WASP. eLife 2, e00884 (2013). · DOI
  22. Smith, B. A. et al. Three-color single molecule imaging shows WASP detachment from Arp2/3 complex triggers actin filament branch formation. eLife 2, e01008 (2013). · DOI
  23. Lappalainen, P. & Drubin, D. G. Cofilin promotes rapid actin filament turnover in vivo. Nature 388, 78–82 (1997). · DOI
  24. Goode, B. L., Drubin, D. G. & Lappalainen, P. Regulation of the cortical actin cytoskeleton in budding yeast by twinfilin, a ubiquitous actin monomer-sequestering protein. J. Cell Biol. 142, 723–733 (1998). · DOI
  25. Cai, L., Makhov, A. M., Schafer, D. A. & Bear, J. E. Coronin 1B antagonizes cortactin and remodels Arp2/3-containing actin branches in lamellipodia. Cell 134, 828–842 (2008). · DOI
  26. Galloni, C. et al. MICAL2 enhances branched actin network disassembly by oxidizing Arp3B-containing Arp2/3 complexes. J. Cell Biol. 220, e202102043 (2021). · DOI
  27. Xie, C. et al. Actin filament debranching regulates cell polarity during cell migration and asymmetric cell division. Proc. Natl Acad. Sci. USA 118, e2100805118 (2021). · DOI
  28. Schnoor, M., Stradal, T. E. & Rottner, K. Cortactin: cell functions of a multifaceted actin-binding protein. Trends Cell Biol. 28, 79–98 (2018). · DOI
  29. Weed, S. A. et al. Cortactin localization to sites of actin assembly in lamellipodia requires interactions with F-actin and the Arp2/3 complex. J. Cell Biol. 151, 29–40 (2000). · DOI
  30. Weaver, A. M. et al. Cortactin promotes and stabilizes Arp2/3-induced actin filament network formation. Curr. Biol. 11, 370–374 (2001). · DOI
  31. Abella, J. V. et al. Isoform diversity in the Arp2/3 complex determines actin filament dynamics. Nat. Cell Biol. 18, 76–86 (2016). · DOI
  32. Weaver, A. M. et al. Interaction of cortactin and N-WASp with Arp2/3 complex. Curr. Biol. 12, 1270–1278 (2002). · DOI
  33. Sharafutdinov, I., Knorr, J., Rottner, K., Backert, S. & Tegtmeyer, N. Cortactin: a universal host cytoskeletal target of Gram-negative and Gram-positive bacterial pathogens. Mol. Microbiol. 118, 623–636 (2022). · DOI
  34. Bandela, M., Belvitch, P., Garcia, J. G. N. & Dudek, S. M. Cortactin in lung cell function and disease. Int. J. Mol. Sci. 23, 4606 (2022). · DOI
  35. Ji, R., Zhu, X. J., Wang, Z. R. & Huang, L. Q. Cortactin in epithelial–mesenchymal transition. Front Cell Dev. Biol. 8, 585619 (2020). · DOI
  36. Yamashita, A., Maeda, K. & Maeda, Y. Crystal structure of CapZ: structural basis for actin filament barbed end capping. EMBO J. 22, 1529–1538 (2003). · DOI
  37. Urnavicius, L. et al. The structure of the dynactin complex and its interaction with dynein. Science 347, 1441–1446 (2015). · DOI · Paper page
  38. Funk, J. et al. A barbed end interference mechanism reveals how capping protein promotes nucleation in branched actin networks. Nat. Commun. 12, 5329 (2021). · DOI
  39. Carman, P. J., Barrie, K. R., Rebowski, G. & Dominguez, R. Structures of the free and capped ends of the actin filament. Science 380, 1287–1292 (2023). · DOI
  40. Fäßler, F., Dimchev, G., Hodirnau, V. V., Wan, W. & Schur, F. K. M. Cryo-electron tomography structure of Arp2/3 complex in cells reveals new insights into the branch junction. Nat. Commun. 11, 6437 (2020). · DOI
  41. Ding, B. et al. Structure of Arp2/3 complex at a branched actin filament junction resolved by single-particle cryo-electron microscopy. Proc. Natl Acad. Sci. USA 119, e2202723119 (2022). · DOI
  42. Oosterheert, W., Klink, B. U., Belyy, A., Pospich, S. & Raunser, S. Structural basis of actin filament assembly and aging. Nature 611, 374–379 (2022). · DOI
  43. Reynolds, M. J., Hachicho, C., Carl, A. G., Gong, R. & Alushin, G. M. Bending forces and nucleotide state jointly regulate F-actin structure. Nature 611, 380–386 (2022). · DOI
  44. Robinson, R. C. et al. Crystal structure of Arp2/3 complex. Science 294, 1679–1684 (2001). · DOI · Paper page
  45. Luan, Q., Liu, S. L., Helgeson, L. A. & Nolen, B. J. Structure of the nucleation-promoting factor SPIN90 bound to the actin filament nucleator Arp2/3 complex. EMBO J. 37, e100005 (2018). · DOI
  46. Zhang, X. et al. HDAC6 modulates cell motility by altering the acetylation level of cortactin. Mol. Cell 27, 197–213 (2007). · DOI
  47. Cao, L., Ghasemi, F., Way, M., Jegou, A. & Romet-Lemonne, G. Regulation of branched versus linear Arp2/3-generated actin filaments. EMBO J. 42, e113008 (2023). · DOI
  48. McGuirk, E. R., Koundinya, N., Nagarajan, P., Padrick, S. B. & Goode, B. L. Direct observation of cortactin protecting Arp2/3-actin filament branch junctions from GMF-mediated destabilization. Eur. J. Cell Biol. 103, 151378 (2024). · DOI
  49. Helgeson, L. A., Prendergast, J. G., Wagner, A. R., Rodnick-Smith, M. & Nolen, B. J. Interactions with actin monomers, actin filaments, and Arp2/3 complex define the roles of WASP family proteins and cortactin in coordinately regulating branched actin networks. J. Biol. Chem. 289, 28856–28869 (2014). · DOI
  50. Zhang, S. & Vavylonis, D. Steps of actin filament branch formation by Arp2/3 complex investigated with coarse-grained molecular dynamics. Front. Cell Dev. Biol. 11, 1071977 (2023). · DOI
  51. Fregoso, F. E. et al. Mechanism of synergistic activation of Arp2/3 complex by cortactin and WASP-family proteins. Nat. Commun. 14, 6894 (2023). · DOI
  52. Lai, F. P. et al. Cortactin promotes migration and platelet-derived growth factor-induced actin reorganization by signaling to Rho-GTPases. Mol. Biol. Cell 20, 3209–3223 (2009). · DOI
  53. Scherer, A. N., Anand, N. S. & Koleske, A. J. Cortactin stabilization of actin requires actin-binding repeats and linker, is disrupted by specific substitutions, and is independent of nucleotide state. J. Biol. Chem. 293, 13022–13032 (2018). · DOI
  54. Liu, S. L., Needham, K. M., May, J. R. & Nolen, B. J. Mechanism of a concentration-dependent switch between activation and inhibition of Arp2/3 complex by coronin. J. Biol. Chem. 286, 17039–17046 (2011). · DOI
  55. Sokolova, O. S. et al. Structural basis of Arp2/3 complex inhibition by GMF, coronin, and arpin. J. Mol. Biol. 429, 237–248 (2017). · DOI
  56. Xie, Y., Budhathoki, R. & Blankenship, J. T. Combinatorial deployment of F-actin regulators to build complex 3D actin structures in vivo. eLife 10, e63046 (2021). · DOI
  57. Chung, J., Goode, B. L. & Gelles, J. Single-molecule analysis of actin filament debranching by cofilin and GMF. Proc. Natl Acad. Sci. USA 119, e2115129119 (2022). · DOI
  58. Ghasemi, F. et al. Regeneration of actin filament branches from the same Arp2/3 complex. Preprint at bioRxiv https://doi.org/10.1101/2023.09.22.558980 (2023). · DOI
  59. Dominguez, R. Actin-binding proteins—a unifying hypothesis. Trends Biochem. Sci. 29, 572–578 (2004). · DOI · Paper page
  60. Baldauf, L. et al. Biomimetic actin cortices shape cell-sized lipid vesicles. Preprint at bioRxiv https://doi.org/10.1101/2023.01.15.524117 (2023). · DOI
  61. Punjani, A., Rubinstein, J. L., Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat. Methods 14, 290–296 (2017). · DOI · Paper page
  62. Pettersen, E. F. et al. UCSF ChimeraX: structure visualization for researchers, educators, and developers. Protein Sci. 30, 70–82 (2021). · DOI
  63. Croll, T. I. ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps. Acta Crystallogr. D. Struct. Biol. 74, 519–530 (2018). · DOI
  64. Kidmose, R. T. et al. Namdinator—automatic molecular dynamics flexible fitting of structural models into cryo-EM and crystallography experimental maps. IUCrJ 6, 526–531 (2019). · DOI
  65. Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D. Biol. Crystallogr. 66, 486–501 (2010). · DOI · Paper page
  66. Jegou, A. et al. Individual actin filaments in a microfluidic flow reveal the mechanism of ATP hydrolysis and give insight into the properties of profilin. PLoS Biol. 9, e1001161 (2011). · DOI
  67. Schindelin, J. et al. Fiji: an open-source platform for biological-image analysis. Nat. Methods 9, 676–682 (2012). · DOI · Paper page

Metadata

Authors
Liu, T., Cao, L., Mladenov, M., Jegou, A., Way, M., & Moores, C. A.
Affiliations
  • Institute of Structural and Molecular Biology (GB)
  • The Francis Crick Institute (GB)
  • Centre National de la Recherche Scientifique (FR)
Corresponding author
  • Way, Michael
  • Moores, Carolyn A.
Venue
Nature Structural & Molecular Biology
Published
2024-01-24
Volume
31
Issue
5
Pages
801-809
ISSN
  • 1545-9985 (ISSN-L)
  • 1545-9993
OpenAlex
W4391169059
Cited by
40
References
71
Citations by year
2026: 9 · 2025: 22 · 2024: 8
FWCI
8.77
Type
journal article
Language
en
Open access
Locations
  • Nature Structural & Molecular Biology (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • HAL (submittedVersion, cc-by-nc)
Funders
  • Wellcome Trust (CC2096, 202679/Z/16/Z, Z/17/Z, 202679, 206166/Z/17/Z, 206166)
  • Francis Crick Institute (CC2096)
  • Cancer Research UK (CC2096)
  • European Commission (HORIZON2020, H2020, H2020‐MSCA‐IF, 101028239, 810207, H2020-MSCA)
  • University of Glasgow
  • Horizon 2020 Framework Programme (H2020-MSCA, 810207)
  • Medical Research Council (CC2096)
  • Birkbeck, University of London
  • H2020 European Research Council (679116)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Cell Biology › Cellular Mechanics and Interactions
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
Keywords
cortactin, Arp2/3 complex, branched actin networks, actin nucleation, actin cytoskeleton dynamics, nucleation-promoting factors, cryo-EM structure
MeSH terms
Actins, Animals, Humans, Actin Cytoskeleton, Models, Molecular, Protein Binding, Cryoelectron Microscopy, Cortactin, Actin-Related Protein 2-3 Complex, Actin-Related Protein 3

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review