The ability of apolipoprotein E fragments to promote intraneuronal accumulation of amyloid beta peptide 42 is both isoform and size-specific
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The apolipoprotein (apo) E4 isoform is the strongest risk factor for late-onset Alzheimer’s disease (AD). ApoE4 is more susceptible to proteolysis than apoE2 and apoE3 isoforms and carboxyl-terminal truncated apoE4 forms have been found in AD patients’ brain. We have previously shown that a specific apoE4 fragment, apoE4-165, promotes amyloid-peptide beta 42 (Aβ42) accumulation in human neuroblastoma SK-N-SH cells and increased intracellular reactive oxygen species formation, two events considered to occur early in AD pathogenesis. Here, we show that these effects are allele-dependent and absolutely require the apoE4 background. Furthermore, the exact length of the fragment is critical since longer or shorter length carboxyl-terminal truncated apoE4 forms do not elicit the same effects. Structural and thermodynamic analyses showed that apoE4-165 has a compact structure, in contrast to other carboxyl-terminal truncated apoE4 forms that are instead destabilized. Compared however to other allelic backgrounds, apoE4-165 is structurally distinct and less thermodynamically stable suggesting that the combination of a well-folded structure with structural plasticity is a unique characteristic of this fragment. Overall, our findings suggest that the ability of apoE fragments to promote Aβ42 intraneuronal accumulation is specific for both the apoE4 isoform and the particular structural and thermodynamic properties of the fragment.
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ANS changes its fluorescence properties when interacting with hydrophobic sites on apoE.
“we used the hydrophobic reporter probe ANS, which changes its fluorescence properties when interacting with hydrophobic sites on apoE (18)(19)(20).”
From Thermodynamic destabilization and aggregation propensity as the mechanism behind the association of apoE3 mutants and lipoprotein glomerulopathy (2018) · cites this paper as [20]
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Harold, D., Abraham, R., Hollingworth, P., Sims, R., Gerrish, A., Hamshere, M. L., Pahwa, J. S., Moskvina, V., Dowzell, K., Williams, A., et al. (2009) · Nature Genetics · doi:10.1038/ng.440 · Cited by 3,326 · see citing works
Intracellular amyloid-β in Alzheimer's disease
LaFerla, F. M., Green, K. N., & Oddo, S. (2007) · Nature Reviews Neuroscience · doi:10.1038/nrn2168 · Cited by 1,942 · see citing works
Three-Dimensional Structure of the LDL Receptor-Binding Domain of Human Apolipoprotein E
Wilson, C., Wardell, M. R., Weisgraber, K. H., Mahley, R. W., & Agard, D. A. (1991) · Science · doi:10.1126/science.2063194 · Cited by 678 · see citing works
Apolipoprotein E structure: insights into function
Hatters, D. M., Peters-Libeu, C. A., & Weisgraber, K. H. (2006) · Trends in Biochemical Sciences · doi:10.1016/j.tibs.2006.06.008 · Cited by 583 · see citing works
Apolipoprotein E: structure determines function, from atherosclerosis to Alzheimer's disease to AIDS
Mahley, R. W., Weisgraber, K. H., & Huang, Y. (2009) · Journal of Lipid Research · doi:10.1194/jlr.r800069-jlr200 · Cited by 580 · see citing works
Aggerbeck, L. P., Wetterau, J. R., Weisgraber, K. H., Wu, C. S., & Lindgren, F. T. (1988) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)68779-4 · Cited by 229 · see citing works
Apolipoprotein E4 Forms a Molten Globule
Morrow, J. A., Hatters, D. M., Lu, B., Höchtl, P., Oberg, K. A., Rupp, B., & Weisgraber, K. H. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.m204898200 · Cited by 204 · see citing works
APOE2 enhances neuroprotection against Alzheimer’s disease through multiple molecular mechanisms
Conejero-Goldberg, C., Gomar, J. J., Bobes-Bascaran, T., Hyde, T. M., Kleinman, J. E., Herman, M. M., Chen, S., Davies, P., & Goldberg, T. E. (2014) · Molecular Psychiatry · doi:10.1038/mp.2013.194 · Cited by 199 · see citing works
Georgiadou, D., Stamatakis, K., Efthimiadou, E. K., Kordas, G., Gantz, D., Chroni, A., & Stratikos, E. (2013) · Journal of Lipid Research · doi:10.1194/jlr.m030965 · Cited by 37 · see citing works
Self-citationArgyri, L., Dafnis, I., Theodossiou, T. A., Gantz, D., Stratikos, E., & Chroni, A. (2014) · Journal of Biological Chemistry · doi:10.1074/jbc.m113.538124 · Cited by 30 · see citing works
Self-citationGeorgiadou, D., Chroni, A., Vezeridis, A., Zannis, V. I., & Stratikos, E. (2011) · PLoS ONE · doi:10.1371/journal.pone.0027037 · Cited by 24 · see citing works
Self-citation
Flagged first, then by citations
Research works printed but not linked: 39
- Jarrett J. T., Berger E. P. & Lansbury P. T. Jr. The carboxy terminus of the beta amyloid protein is critical for the seeding of amyloid formation: implications for the pathogenesis of Alzheimer’s disease. 32, 4693– 4697 (1993). 8490014
- Selkoe D. J. Alzheimer’s disease. Cold Spring. Harb. Perspect. Biol. 3, a004457 (2011). 21576255 PMC3119915
- Musiek E. S. & Holtzman D. M. Three dimensions of the amyloid hypothesis: time, space and ‘wingmen’. 18, 800– 806 (2015). PMC4445458 26007213
- Baker-Nigh A.. Neuronal amyloid-beta accumulation within cholinergic basal forebrain in ageing and Alzheimer’s disease. 138, 1722– 1737 (2015). PMC4542619 25732182
- Bayer T. A. & Wirths O. Review on the APP/PS1KI mouse model: intraneuronal Abeta accumulation triggers axonopathy, neuron loss and working memory impairment. Genes Brain Behav. 7 Suppl 1, 6– 11 (2008). 18184366
- Scala F.. Intraneuronal Abeta accumulation induces hippocampal neuron hyperexcitability through A-type K(+) current inhibition mediated by activation of caspases and GSK-3. Neurobiol. Aging. 36, 886– 900 (2015). 25541422 PMC4801354
- Lambert J. C.. Genome-wide association study identifies variants at CLU and CR1 associated with Alzheimer’s disease. 41, 1094– 1099 (2009). 19734903
- Mahley R. W., Weisgraber K. H. & Huang Y. Apolipoprotein E4: a causative factor and therapeutic target in neuropathology, including Alzheimer’s disease. 103, 5644– 5651 (2006). PMC1414631 16567625
- Zannis V. I.. “Lipoproteins and Atherogenesis,“in Molecular Mechanisms of Atherosclerosis, edited by Loscalzo J. (Taylor & Francis, Abington, UK), pp. 111– 174 (2004).
- Zannis V. I., Cole F. S., Jackson C. L., Kurnit D. M. & Karathanasis S. K. Distribution of apolipoprotein A-I, C-II, C-III, and E mRNA in fetal human tissues. Time-dependent induction of apolipoprotein E mRNA by cultures of human monocyte-macrophages. 24, 4450– 4455 (1985). 3931677
- Brecht W. J.. Neuron-specific apolipoprotein e4 proteolysis is associated with increased tau phosphorylation in brains of transgenic mice. 24, 2527– 2534 (2004). PMC6729489 15014128
- Harris F. M.. Carboxyl-terminal-truncated apolipoprotein E4 causes Alzheimer’s disease-like neurodegeneration and behavioral deficits in transgenic mice. 100, 10966– 10971 (2003). PMC196910 12939405
- Huang Y.. Apolipoprotein E fragments present in Alzheimer’s disease brains induce neurofibrillary tangle-like intracellular inclusions in neurons. 98, 8838– 8843 (2001). PMC37522 11447277
- Jones P. B.. Apolipoprotein E: isoform specific differences in tertiary structure and interaction with amyloid-beta in human Alzheimer brain. PLoS. ONE. 6, e14586 (2011). 21297948 PMC3031506
- Rohn T. T., Catlin L. W., Coonse K. G. & Habig J. W. Identification of an amino-terminal fragment of apolipoprotein E4 that localizes to neurofibrillary tangles of the Alzheimer’s disease brain. Brain Res. 1475, 106– 115 (2012). 22902767
- Wang M. & Turko I. V. Mass spectrometry quantification revealed accumulation of C-terminal fragment of apolipoprotein E in the Alzheimer’s frontal cortex. 8, e61498 (2013). PMC3623866 23593485
- Cho H. S., Hyman B. T., Greenberg S. M. & Rebeck G. W. Quantitation of apoE domains in Alzheimer disease brain suggests a role for apoE in Abeta aggregation. 60, 342– 349 (2001). 11305869
- Dafnis I.. An apolipoprotein E4 fragment can promote intracellular accumulation of amyloid peptide beta 42. 115, 873– 884 (2010). PMC2910182 20412390
- Wetterau J. R., Aggerbeck L. P., Rall S. C. Jr. & Weisgraber K. H. Human apolipoprotein E3 in aqueous solution. I. Evidence for two structural domains. 263, 6240– 6248 (1988). 3360781
- Dong L. M.. Human apolipoprotein E. Role of arginine 61 in mediating the lipoprotein preferences of the E3 and E4 isoforms. 269, 22358– 22365 (1994). 8071364
- Chroni A.. Biophysical analysis of progressive C-terminal truncations of human apolipoprotein E4: insights into secondary structure and unfolding properties. 47, 9071– 9080 (2008). PMC2692411 18690708
- Morrow J. A.. Differences in stability among the human apolipoprotein E isoforms determined by the amino-terminal domain. 39, 11657– 11666 (2000). 10995233
- Bien-Ly N.. C-terminal-truncated apolipoprotein (apo) E4 inefficiently clears amyloid-beta (Abeta) and acts in concert with Abeta to elicit neuronal and behavioral deficits in mice. Proc. Natl. Acad. Sci. USA 108, 4236– 4241 (2011). 21368138 PMC3053957
- Argyri L., Skamnaki V., Stratikos E. & Chroni A. A simple approach for human recombinant apolipoprotein E4 expression and purification. 79, 251– 257 (2011). 21712092
- Kay A. D.. Cerebrospinal fluid apolipoprotein E concentration decreases after traumatic brain injury. J. Neurotrauma 20, 243– 250 (2003). 12820678
- Wang L.. Cerebrospinal fluid apolipoprotein E concentration decreases after seizure. Seizure. 19, 79– 83 (2010). 20093050
- Li J.. Differential regulation of amyloid-beta endocytic trafficking and lysosomal degradation by apolipoprotein E isoforms. 287, 44593– 44601 (2012). PMC3531774 23132858
- Elliott D. A.. Isoform-specific proteolysis of apolipoprotein-E in the brain. Neurobiol. Aging. 32, 257– 271 (2011). 19278755
- Marques M. A., Tolar M., Harmony J. A. & Crutcher K. A. A thrombin cleavage fragment of apolipoprotein E exhibits isoform-specific neurotoxicity. Neuroreport 7, 2529– 2532 (1996). 8981417
- Williams I. B., Convertino M., Das J. & Dokholyan N. V. ApoE4-specific Misfolded Intermediate Identified by Molecular Dynamics Simulations. PLoS Comput. Biol. 11, e1004359 (2015). 26506597 PMC4623519
- Li X., Kypreos K., Zanni E. E. & Zannis V. Domains of apoE required for binding to apoE receptor 2 and to phospholipids: Implications for the functions of apoE in the brain. 42, 10406– 10417 (2003). 12950167
- Aleshkov S. B., Li X., Lavrentiadou S. N. & Zannis V. I. Contribution of cysteine 158, the glycosylation site threonine 194, the amino- and carboxy-terminal domains of apolipoprotein E in the binding to amyloid peptide beta (1–40). 38, 8918– 8925 (1999). 10413465
- Pillot T.. Beta-amyloid peptide interacts specifically with the carboxy-terminal domain of human apolipoprotein E: relevance to Alzheimer’s disease. 72, 230– 237 (1999). 9886074
- Morrisett J. D., David J. S., Pownall H. J. & Gotto A. M. Jr. Interaction of an apolipoprotein (apoLP-alanine) with phosphatidylcholine. 12, 1290– 1299 (1973). 4348832
- Gorshkova I. N., Liadaki K., Gursky O., Atkinson D. & Zannis V. I. Probing the lipid-free structure and stability of apolipoprotein A-I by mutation. 39, 15910– 15919 (2000). 11123918
- Maity A., Mukherjee P., Das T., Ghosh P. & Purkayastha P. Forster resonance energy transfer between pyrene and bovine serum albumin: effect of the hydrophobic pockets of cyclodextrins. Spectrochim. Acta A. Mol. Biomol. Spectrosc. 92, 382– 387 (2012). 22446788
- Lesuisse C. & Martin L. J. Long-term culture of mouse cortical neurons as a model for neuronal development, aging, and death. J. Neurobiol. 51, 9– 23 (2002). 11920724
- Schindelin J.. Fiji: an open-source platform for biological-image analysis. Nat. Methods 9, 676– 682 (2012). 22743772 PMC3855844
- Bae Y. S.. Epidermal growth factor (EGF)-induced generation of hydrogen peroxide. Role in EGF receptor-mediated tyrosine phosphorylation. 272, 217– 221 (1997). 8995250
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- Authors
- Dafnis, I., Argyri, L., Sagnou, M., Tzinia, A., Tsilibary, E. C., Stratikos, E., & Chroni, A.
- Affiliations
- National Centre of Scientific Research "Demokritos" (GR)
- Corresponding author
- Chroni, Angeliki
- Venue
- Scientific Reports
- Published
- 2016-08-01
- Volume
- 6
- Issue
- 1
- Pages
- 30654-30654
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC4967930
- OpenAlex
- W2495903187
- Cited by
- 38
- References
- 11
- Citations by year
- 2026: 1 · 2025: 2 · 2024: 1 · 2023: 5 · 2022: 2 · 2021: 5 · 2020: 3 · 2019: 9 · 2018: 6 · 2017: 4
- FWCI
- 5.10
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Funders
- European Commission
- European Social Fund
- Topics
- Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
- Health Sciences › Medicine › Psychiatry and Mental health › Dementia and Cognitive Impairment Research
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Keywords
- APOE ε4, amyloid-beta 42, Alzheimer's disease, protein folding stability, thermodynamic stability, reactive oxygen species, SK-N-SH cells
- MeSH terms
- Apolipoproteins E, Humans, Neurons, Peptide Fragments, Protein Conformation, Tumor Cells, Cultured, Amyloid beta-Peptides, Protein Folding, Protein Isoforms, Apolipoprotein E4, Protein Stability
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