The DOI matches its Crossref record; 70 of the 71 references it cites were found in a registry or an index.
Multiple pathways process stalled replication forks
Open accessAbstract
Impairment of replication fork progression is a serious threat to living organisms and a potential source of genome instability. Studies in prokaryotes have provided evidence that inactivated replication forks can restart by the reassembly of the replication machinery. Several strategies for the processing of inactivated replication forks before replisome reassembly have been described. Most of these require the action of recombination proteins, with different proteins being implicated, depending on the cause of fork arrest. The action of recombination proteins at blocked forks is not necessarily accompanied by a strand-exchange reaction and may prevent rather than repair fork breakage. These various restart pathways may reflect different structures at stalled forks. We review here the different strategies of fork processing elicited by different kinds of replication impairments in prokaryotes and the variety of roles played by recombination proteins in these processes.
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“Unrepaired fork gaps can become frank DSB [24, 61, 62].”
From NER initiation factors, DDB2 and XPC, regulate UV radiation response by recruiting ATR and ATM kinases to DNA damage sites (2013) · cites this paper as [61]
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Cites
Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology
Neidhardt, F. C., & Ingraham, J. L. (1987) · Medical Entomology and Zoology · Cited by 4,089
Multiple Pathways of Recombination Induced by Double-Strand Breaks in Saccharomyces cerevisiae
Pâques, F., & Haber, J. E. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.2.349-404.1999 · Cited by 2,120
Supercoiling of the DNA template during transcription.
Liu, L. F., & Wang, J. C. (1987) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.84.20.7024 · Cited by 1,877
Rupp, W. D., & Howard-flanders, P. (1968) · Journal of Molecular Biology · doi:10.1016/0022-2836(68)90445-2 · Cited by 1,093
Recombinational Repair of DNA Damage in Escherichia coli and Bacteriophage λ
Kuzminov, A. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.4.751-813.1999 · Cited by 897
Fork Reversal and ssDNA Accumulation at Stalled Replication Forks Owing to Checkpoint Defects
Sogo, J. M., Lopes, M., & Foiani, M. (2002) · Science · doi:10.1126/science.1074023 · Cited by 824
Toward Maintaining the Genome: DNA Damage and Replication Checkpoints
Nyberg, K. A., Michelson, R. J., Putnam, C. W., & Weinert, T. A. (2002) · Annual Review of Genetics · doi:10.1146/annurev.genet.36.060402.113540 · Cited by 793
RuvAB Acts at Arrested Replication Forks
Seigneur, M., Bidnenko, V., Ehrlich, S. D., & Michel, B. (1998) · Cell · doi:10.1016/s0092-8674(00)81772-9 · Cited by 538
Self-citationKogoma, T. (1997) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.61.2.212-238.1997 · Cited by 525
Maintenance of Genome Stability in Saccharomyces cerevisiae
Kolodner, R. D., Putnam, C. D., & Myung, K. (2002) · Science · doi:10.1126/science.1075277 · Cited by 470
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- Wang, T. C. & Smith, K. C. (1986) Mutat. Res. 165, 39–44.3510373
- 10.1093/genetics/166.4.1631 · DOI
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Items 301–321 of 321
Analysis of DNA Recombination Proteins in DNA Damage Response
Tan, T. (2005) · EUR Research Repository (Erasmus University Rotterdam)
Cardone, J. M. (2006) · Americanae (AECID Library)
da Silveira, G. G. (2012) · Digital Library of Theses and Dissertations (Universidade de São Paulo) · doi:10.11606/d.17.2012.tde-08082014-112232
Genetics of DNA replication and homologous recombination in arabidopsis
Schürmann, D. (2005) · edoc (University of Basel) · doi:10.5451/unibas-003646982
Coping with DNA Damage and Replication Stress
Ulrich, H. D. (2009) · Royal Society of Chemistry eBooks · doi:10.1039/9781847559852-00178
Recombination Intermediates F-Box DNA Helicase in Processing Schizosaccharomyces pombe Role of the
Toda, T., Carr, A. M., Iwasaki, H., Furukawa, F., & Sakaguchi, C. (2014)
Tetrameric UvrD helicase is located at the E. coli replisome due to frequent replication blocksPreprint
Wollman, A. J. M., Syeda, A. H., Howard, J. A. L., Payne-Dwyer, A. L., Leech, A., Warecka, D., Guy, C. P., McGlynn, P., Hawkins, M., & Leake, M. C. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.02.22.432310
Characterization of Two Novel Mutants of DNA Polymerase Delta in Drosophila melanogaster
Hunter, C. M. (2011) · The Scholarship East Carolina University's Institutional Repository (East Carolina University)
Topological Behavior of Plasmid DNA
Higgins, N. P., & Vologodskii, A. V. (2015) · ASM Press eBooks · doi:10.1128/9781555818982.ch7
Recombinational Repair, Replication Fork Repair, and DNA Damage Tolerance
Friedberg, E. C., Walker, G. C., Siede, W., Wood, R. D., Schultz, R. A., & Ellenberger, T. (2014) · ASM Press eBooks · doi:10.1128/9781555816704.ch16
Replikation, Reparatur und Rekombination von DNA
(2017) · Wiley-VCH eBooks · doi:10.1002/9783527698448.ch5
Norris, V. (2007) · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature · doi:10.3410/f.1086149.539133
Mycobacterial DnaQ is an Alternative Proofreader Ensuring DNA Replication FidelityPreprint
Deng, M.-Z., Liu, Q., Cui, S.-J., Fu, H., Gan, M., Xu, Y., Cai, X., Sha, W., Zhao, G., Fortune, S. M., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.10.24.563508
Mutations de la voie ATR-CHK1, réponse au stress réplicatif et cancer
Egger, T. (2018) · theses.fr (ABES) · doi:10.70675/eb51eb1ezc51dz4737zaf38z954d1a68dbea
Rôle de la topoisomérase I dans la stabilité du génome chez Escherichia coli
Ngningone, C. M. (2013) · doi:10.71781/29175
Metadata
- Authors
- Michel, B., Grompone, G., Florès, M.-J., & Bidnenko, V.
- Affiliations
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR)
- Laboratoire de Génétique Microbienne, Institut National de la Recherche Agronomique, 78352 Jouy en Josas Cedex, France
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2004-08-24
- Volume
- 101
- Issue
- 35
- Pages
- 12783-12788
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC516472
- OpenAlex
- W2114809602
- Cited by
- 322
- References
- 71
- Citations by year
- 2025: 2 · 2024: 3 · 2023: 3 · 2022: 3 · 2021: 4 · 2020: 11 · 2019: 6 · 2018: 8 · 2017: 6 · 2016: 13 · 2015: 8 · 2014: 18 · 2013: 13 · 2012: 16
- FWCI
- 3.31
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Keywords
- replication fork restart, stalled replication forks, recombination proteins, genomic instability, strand exchange
- MeSH terms
- Bacteria, DNA, DNA Repair, DNA Replication, Mutation, DNA Gyrase
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