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Multiple pathways process stalled replication forks
Open accessAbstract
Impairment of replication fork progression is a serious threat to living organisms and a potential source of genome instability. Studies in prokaryotes have provided evidence that inactivated replication forks can restart by the reassembly of the replication machinery. Several strategies for the processing of inactivated replication forks before replisome reassembly have been described. Most of these require the action of recombination proteins, with different proteins being implicated, depending on the cause of fork arrest. The action of recombination proteins at blocked forks is not necessarily accompanied by a strand-exchange reaction and may prevent rather than repair fork breakage. These various restart pathways may reflect different structures at stalled forks. We review here the different strategies of fork processing elicited by different kinds of replication impairments in prokaryotes and the variety of roles played by recombination proteins in these processes.
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“Unrepaired fork gaps can become frank DSB [24, 61, 62].”
From NER initiation factors, DDB2 and XPC, regulate UV radiation response by recruiting ATR and ATM kinases to DNA damage sites (2013) · cites this paper as [61]
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Citations
Cites
Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology
Neidhardt, F. C., & Ingraham, J. L. (1987) · Medical Entomology and Zoology · Cited by 4,089
Multiple Pathways of Recombination Induced by Double-Strand Breaks in Saccharomyces cerevisiae
Pâques, F., & Haber, J. E. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.2.349-404.1999 · Cited by 2,120
Supercoiling of the DNA template during transcription.
Liu, L. F., & Wang, J. C. (1987) · Proceedings of the National Academy of Sciences of the United States of America · doi:10.1073/pnas.84.20.7024 · Cited by 1,877
Rupp, W. D., & Howard-flanders, P. (1968) · Journal of Molecular Biology · doi:10.1016/0022-2836(68)90445-2 · Cited by 1,093
Recombinational Repair of DNA Damage in Escherichia coli and Bacteriophage λ
Kuzminov, A. (1999) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.63.4.751-813.1999 · Cited by 897
Fork Reversal and ssDNA Accumulation at Stalled Replication Forks Owing to Checkpoint Defects
Sogo, J. M., Lopes, M., & Foiani, M. (2002) · Science · doi:10.1126/science.1074023 · Cited by 824
Toward Maintaining the Genome: DNA Damage and Replication Checkpoints
Nyberg, K. A., Michelson, R. J., Putnam, C. W., & Weinert, T. A. (2002) · Annual Review of Genetics · doi:10.1146/annurev.genet.36.060402.113540 · Cited by 793
RuvAB Acts at Arrested Replication Forks
Seigneur, M., Bidnenko, V., Ehrlich, S. D., & Michel, B. (1998) · Cell · doi:10.1016/s0092-8674(00)81772-9 · Cited by 538
Self-citationKogoma, T. (1997) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.61.2.212-238.1997 · Cited by 525
Maintenance of Genome Stability in Saccharomyces cerevisiae
Kolodner, R. D., Putnam, C. D., & Myung, K. (2002) · Science · doi:10.1126/science.1075277 · Cited by 470
Research works printed but not linked: 2
- Wang, T. C. & Smith, K. C. (1986) Mutat. Res. 165, 39–44.3510373
- 10.1093/genetics/166.4.1631 · DOI
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Mechanism of homologous recombination: mediators and helicases take on regulatory functions
Sung, P., & Klein, H. L. (2006) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2008 · Cited by 744
RecBCD Enzyme and the Repair of Double-Stranded DNA Breaks
Dillingham, M. S., & Kowalczykowski, S. C. (2008) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00020-08 · Cited by 586
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Cirz, R. T., Chin, J. K., Andes, D. R., de Crécy‐Lagard, V., Craig, W. A., & Romesberg, F. E. (2005) · PLoS Biology · doi:10.1371/journal.pbio.0030176 · Cited by 583
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Shereda, R. D., Kozlov, A. G., Lohman, T. M., Cox, M. M., & Keck, J. L. (2008) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.1080/10409230802341296 · Cited by 558
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Mirkin, E. V., & Mirkin, S. M. (2007) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00030-06 · Cited by 482
Nonhomologous End Joining in Yeast
Daley, J. M., Palmbos, P. L., Wu, D. L., & Wilson, T. E. (2005) · Annual Review of Genetics · doi:10.1146/annurev.genet.39.073003.113340 · Cited by 430
Abby, S. S., Néron, B., Ménager, H., Touchon, M., & Rocha, E. P. C. (2014) · PLoS ONE · doi:10.1371/journal.pone.0110726 · Cited by 404
Quinolones: Action and Resistance Updated
Drlica, K., Hiasa, H., Kerns, R. J., Malik, M., MUSTAEV, A. A., & Zhao, X. (2009) · Current Topics in Medicinal Chemistry · doi:10.2174/156802609789630947 · Cited by 377
Lundin, C. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki681 · Cited by 367
Hohmann, S. (2003) · Springer eBooks · Cited by 356
Comparative and Evolutionary Analysis of the Bacterial Homologous Recombination Systems
Rocha, E. P. C., Cornet, E., & Michel, B. (2005) · PLoS Genetics · doi:10.1371/journal.pgen.0010015 · Cited by 341
Self-citationSaleh-Gohari, N., Bryant, H. E., Schultz, N., Parker, K. M., Cassel, T. N., & Helleday, T. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.16.7158-7169.2005 · Cited by 339
Replication fork reactivation downstream of a blocked nascent leading strand
Heller, R. C., & Marians, K. J. (2006) · Nature · doi:10.1038/nature04329 · Cited by 318
Break-Induced Replication and Recombinational Telomere Elongation in Yeast
McEachern, M. J., & Haber, J. E. (2006) · Annual Review of Biochemistry · doi:10.1146/annurev.biochem.74.082803.133234 · Cited by 311
Nutritional Control of Elongation of DNA Replication by (p)ppGpp
Wang, J. D., Sanders, G. M., & Grossman, A. D. (2007) · Cell · doi:10.1016/j.cell.2006.12.043 · Cited by 288
Suffering in silence: the tolerance of DNA damage
Friedberg, E. C. (2005) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1781 · Cited by 271
Replisome assembly and the direct restart of stalled replication forks
Heller, R. C., & Marians, K. J. (2006) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2058 · Cited by 268
Lambert, S., Watson, A. T., Sheedy, D. M., Martin, B. R., & Carr, A. M. (2005) · Cell · doi:10.1016/j.cell.2005.03.022 · Cited by 261
Rad54: the Swiss Army knife of homologous recombination?
Heyer, W., Li, X., Rolfsmeier, M. L., & Zhang, X. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl481 · Cited by 254
Motoring along with the bacterial RecA protein
Cox, M. M. (2007) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2099 · Cited by 252
The annealing helicase SMARCAL1 maintains genome integrity at stalled replication forksPreprint
Bansbach, C. E., Betous, R., Lovejoy, C. A., Glick, G. G., & Cortez, D. (2009) · Genes & Development · doi:10.1101/gad.1839909 · Cited by 254
Trivedi, R. N., Almeida, K. H., Fornsaglio, J. L., Schamus, S., & Sobol, R. W. (2005) · Cancer Research · doi:10.1158/0008-5472.can-05-0715 · Cited by 248
A Double Holliday Junction Dissolvasome Comprising BLM, Topoisomerase IIIα, and BLAP75
Raynard, S. J., Bussen, W., & Sung, P. (2006) · Journal of Biological Chemistry · doi:10.1074/jbc.c600051200 · Cited by 227
Replication fork reversal and the maintenance of genome stability
Atkinson, J., & McGlynn, P. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkp244 · Cited by 221
Whirly proteins maintain plastid genome stability in Arabidopsis
Maréchal, A., Parent, J., Véronneau-Lafortune, F., Joyeux, A., Lang, B. F., & Brisson, N. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0901710106 · Cited by 221
Couturier, E., & Rocha, E. (2006) · Molecular Microbiology · doi:10.1111/j.1365-2958.2006.05046.x · Cited by 220
Chromosome Replication and Segregation in Bacteria
Reyes‐Lamothe, R., Nicolas, É., & Sherratt, D. J. (2012) · Annual Review of Genetics · doi:10.1146/annurev-genet-110711-155421 · Cited by 207
Spontaneous DNA breakage in single living Escherichia coli cells
Pennington, J. M., & Rosenberg, S. M. (2007) · Nature Genetics · doi:10.1038/ng2051 · Cited by 206
Kais, Z., Rondinelli, B., Holmes, A. L., O’Leary, C., Kozono, D., D’Andrea, A. D., & Ceccaldi, R. (2016) · Cell Reports · doi:10.1016/j.celrep.2016.05.031 · Cited by 208
Recombination proteins and rescue of arrested replication forks
Michel, B., Boubakri, H., Baharoglu, Z., Masson, M. L., & Lestini, R. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.02.016 · Cited by 211
Self-citationRad54, the motor of homologous recombination
Mazin, A. V., Mazina, O. M., Bugreev, D. V., & Rossi, M. J. (2010) · DNA repair · doi:10.1016/j.dnarep.2009.12.006 · Cited by 185
Trautinger, B. W., Jaktaji, R. P., Rusakova, E. E., & Lloyd, R. G. (2005) · Molecular Cell · doi:10.1016/j.molcel.2005.06.004 · Cited by 175
Genesis, effects and fates of repeats in prokaryotic genomes
Treangen, T. J., Abraham, A., Touchon, M., & Rocha, E. P. C. (2009) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2009.00169.x · Cited by 182
Wellinger, R. E., Prado, F., & Aguilera, A. (2006) · Molecular and Cellular Biology · doi:10.1128/mcb.26.8.3327-3334.2006 · Cited by 171
Petermann, E., & Caldecott, K. W. (2006) · Cell Cycle · doi:10.4161/cc.5.19.3256 · Cited by 170
Genome-Wide Requirements for Resistance to Functionally Distinct DNA-Damaging Agents
Lee, W., St.Onge, R. P., Proctor, M. J., Flaherty, P., Jordan, M. I., Arkin, A. P., Davis, R. W., Nislow, C., & Giaever, G. N. (2005) · PLoS Genetics · doi:10.1371/journal.pgen.0010024 · Cited by 164
Hashimoto, Y., Puddu, F., & Costanzo, V. (2011) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2177 · Cited by 174
DNA Helicases Required for Homologous Recombination and Repair of Damaged Replication Forks
Wu, L., & Hickson, I. D. (2006) · Annual Review of Genetics · doi:10.1146/annurev.genet.40.110405.090636 · Cited by 161
Human Mitochondrial DNA ReplicationPreprint
Holt, I. J., & Reyes, A. (2012) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a012971 · Cited by 155
Flores, M. J., Sanchez, N., & Michel, B. (2005) · Molecular Microbiology · doi:10.1111/j.1365-2958.2005.04753.x · Cited by 156
Self-citationHeller, R. C., & Marians, K. J. (2005) · Molecular Cell · doi:10.1016/j.molcel.2005.01.019 · Cited by 152
Duquette, M. L., Pham, P., Goodman, M., & Maizels, N. (2005) · Oncogene · doi:10.1038/sj.onc.1208746 · Cited by 145
BRCA1 controls homologous recombination at Tus/Ter-stalled mammalian replication forks
Willis, N. A., Chandramouly, G., Huang, B., Kwok, A., Follonier, C., Deng, C., & Scully, R. (2014) · Nature · doi:10.1038/nature13295 · Cited by 147
Nakano, T., Morishita, S., Katafuchi, A., Matsubara, M., Horikawa, Y., Terato, H., Salem, A. M. H., Izumi, S., Pack, S. P., Makino, K., et al. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.07.029 · Cited by 142
Kang, J., & Blaser, M. J. (2006) · Nature Reviews Microbiology · doi:10.1038/nrmicro1528 · Cited by 141
Maintenance of fork integrity at damaged DNA and natural pause sites
Tourrière, H., & Pasero, P. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.02.004 · Cited by 151
López‐Camacho, E., Elez, M., Matić, I., & Blázquez, J. (2007) · Molecular Microbiology · doi:10.1111/j.1365-2958.2007.05642.x · Cited by 144
Costes, A., Lecointe, F., McGovern, S., Quevillon‐Chéruel, S., & Polard, P. (2010) · PLoS Genetics · doi:10.1371/journal.pgen.1001238 · Cited by 143
A Nonuniform Stepping Mechanism for E. coli UvrD Monomer Translocation along Single-Stranded DNA
Tomko, E. J., Fischer, C. J., Niedziela‐Majka, A., & Lohman, T. M. (2007) · Molecular Cell · doi:10.1016/j.molcel.2007.03.024 · Cited by 125
Checkpoint responses to replication fork barriers
Lambert, S., & Carr, A. M. (2004) · Biochimie · doi:10.1016/j.biochi.2004.10.020 · Cited by 125
Pohjoismäki, J. L. O., Goffart, S., Tyynismaa, H., Willcox, S., Ide, T., Kang, D., Suomalainen, A., Karhunen, P. J., Griffith, J. D., Holt, I. J., et al. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.016600 · Cited by 122
Niedziela‐Majka, A., Chesnik, M. A., Tomko, E. J., & Lohman, T. M. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m704399200 · Cited by 121
Arrested replication fork processing: Interplay between checkpoints and recombination
Lambert, S., Froget, B., & Carr, A. M. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.02.024 · Cited by 120
Double-strand break repair in bacteria: a view fromBacillus subtilis
Ayora, S., Carrasco, B., Cárdenas, P. P., César, C. E., Cañas, C., Yadav, T., Marchisone, C., & Alonso, J. C. (2011) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2011.00272.x · Cited by 132
BRCA1 Is Required for Postreplication Repair after UV-Induced DNA Damage
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Repair and biochemical effects of DNA–protein crosslinks
Ide, H., Shoulkamy, M. I., Nakano, T., Miyamoto‐Matsubara, M., & Salem, A. M. H. (2010) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2010.12.007 · Cited by 120
Anticipating chromosomal replication fork arrest: SSB targets repair DNA helicases to active forks
Lecointe, F., Sérèna, C., Velten, M., Costes, A., McGovern, S., Meile, J., Errington, J., Ehrlich, S. D., Noirot, P. H., & Polard, P. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601848 · Cited by 125
Bipartite stimulatory action of the Hop2–Mnd1 complex on the Rad51 recombinasePreprint
Chi, P., Filippo, J. S., Sehorn, M. G., Petukhova, G. V., & Sung, P. (2007) · Genes & Development · doi:10.1101/gad.1563007 · Cited by 118
Replication Fork Reversal after Replication–Transcription Collision
de Septenville, A. L., Duigou, S., Boubakri, H., & Michel, B. (2012) · PLoS Genetics · doi:10.1371/journal.pgen.1002622 · Cited by 113
Self-citationPossoz, C., Filipe, S. R., Grainge, I., & Sherratt, D. J. (2006) · The EMBO Journal · doi:10.1038/sj.emboj.7601155 · Cited by 113
Achkar, E. E., Gerbault-Seureau, M., Muleris, M., Dutrillaux, B., & Debatisse, M. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0506497102 · Cited by 113
Bacterial Responses and Genome Instability Induced by Subinhibitory Concentrations of Antibiotics
Laureti, L., Matić, I., & Gutierrez, A. (2013) · Antibiotics · doi:10.3390/antibiotics2010100 · Cited by 120
The Fanconi Anemia Pathway of Genomic Maintenance
Levitus, M., Joenje, H., & de Winter, J. P. (2006) · Analytical Cellular Pathology · doi:10.1155/2006/974975 · Cited by 108
Richard, D. J., Bolderson, E., & Khanna, K. K. (2009) · Critical Reviews in Biochemistry and Molecular Biology · doi:10.1080/10409230902849180 · Cited by 108
The replication fork trap and termination of chromosome replication
Duggin, I. G., Wake, R. G., Bell, S. D., & Hill, T. (2008) · Molecular Microbiology · doi:10.1111/j.1365-2958.2008.06500.x · Cited by 105
Minding the gap: The underground functions of BRCA1 and BRCA2 at stalled replication forks
Nagaraju, G., & Scully, R. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.02.020 · Cited by 103
Replication fork blockage by RTS1 at an ectopic site promotes recombination in fission yeast
Ahn, J. S., Osman, F., & Whitby, M. C. (2005) · The EMBO Journal · doi:10.1038/sj.emboj.7600670 · Cited by 104
Mechanisms of tandem repeat instability in bacteria
Bichara, M., Wagner, J. E., & Lambert, I. B. (2006) · Mutation research. Fundamental and molecular mechanisms of mutagenesis · doi:10.1016/j.mrfmmm.2006.01.020 · Cited by 103
López‐Camacho, E., & Blázquez, J. (2009) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.00358-09 · Cited by 103
Herzberg, K., Bashkirov, V. I., Rolfsmeier, M., Haghnazari, E., McDonald, W. H., Anderson, S., Bashkirova, E. V., Yates, J. R., & Heyer, W.-D. (2006) · Molecular and Cellular Biology · doi:10.1128/mcb.01317-06 · Cited by 95
Structure of the DNA Repair Helicase Hel308 Reveals DNA Binding and Autoinhibitory Domains
Richards, J. D., Johnson, K. A., Liu, H., McRobbie, A.-M., McMahon, S. A., Oke, M., Carter, L. G., Naismith, J. H., & White, M. F. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m707548200 · Cited by 98
Meile, J., Wu, L. J., Ehrlich, S. D., Errington, J., & Noirot, P. (2006) · PROTEOMICS · doi:10.1002/pmic.200500512 · Cited by 95
The Role of DNA Double-Strand Breaks in Spontaneous Homologous Recombination in S. cerevisiae
Lettier, G., Feng, Q., de Mayolo, A. A., Erdeniz, N., Reid, R. J. D., Lisby, M., Mortensen, U. H., & Rothstein, R. J. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020194 · Cited by 96
The DinG Protein from Escherichia coli Is a Structure-specific Helicase
Voloshin, O. N., & Camerini‐Otero, R. D. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m700376200 · Cited by 96
UvrD controls the access of recombination proteins to blocked replication forks
Lestini, R., & Michel, B. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601804 · Cited by 93
Self-citationReplisome mechanics: insights into a twin DNA polymerase machine
Pomerantz, R. T., & O’Donnell, M. E. (2007) · Trends in Microbiology · doi:10.1016/j.tim.2007.02.007 · Cited by 92
In front of and behind the replication fork: bacterial type IIA topoisomerases
Sissi, C., & Palumbo, M. (2010) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-010-0299-5 · Cited by 93
RecG interacts directly with SSB: implications for stalled replication fork regression
Buss, J. A., Kimura, Y., & Bianco, P. R. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn795 · Cited by 92
Topological Behavior of Plasmid DNA
Higgins, N. P., & Vologodskii, A. V. (2015) · Microbiology Spectrum · doi:10.1128/microbiolspec.plas-0036-2014 · Cited by 90
DNA Repeat Rearrangements Mediated by DnaK-Dependent Replication Fork Repair
Goldfless, S. J., Morag, A. S., Belisle, K. A., Sutera, V. A., & Lovett, S. T. (2006) · Molecular Cell · doi:10.1016/j.molcel.2006.01.025 · Cited by 92
Cameron, A. D. S., & Redfield, R. J. (2006) · Nucleic Acids Research · doi:10.1093/nar/gkl734 · Cited by 93
Ray, A., Milum, K., Battu, A., Wani, G., & Wani, A. A. (2013) · DNA Repair · doi:10.1016/j.dnarep.2013.01.003 · Cited by 85
“If not repaired, stalled fork gaps can evolve into DSB [24].”
BackgroundInfluentialA Roadblock-and-Kill Mechanism of Action Model for the DNA-Targeting Antibiotic Ciprofloxacin
Ojkic, N., Lilja, E., Direito, S. O. L., Dawson, A. J., Allen, R. J., & Waclaw, B. (2020) · Antimicrobial Agents and Chemotherapy · doi:10.1128/aac.02487-19 · Cited by 91
Courcelle, C. T., Chow, K.-H., Casey, A., & Courcelle, J. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0600785103 · Cited by 87
Sánchez, H., Kidane, D., Cozar, M. C., Graumann, P. L., & Alonso, J. C. (2005) · Journal of Bacteriology · doi:10.1128/jb.188.2.353-360.2006 · Cited by 87
Is RecG a general guardian of the bacterial genome?
Rudolph, C. J., Upton, A. L., Briggs, G. S., & Lloyd, R. G. (2010) · DNA repair · doi:10.1016/j.dnarep.2009.12.014 · Cited by 83
Role of the Schizosaccharomyces pombe F-Box DNA Helicase in Processing Recombination Intermediates
Morishita, T., Furukawa, F., Sakaguchi, C., Toda, T., Carr, A. M., Iwasaki, H., & Shinagawa, H. (2005) · Molecular and Cellular Biology · doi:10.1128/mcb.25.18.8074-8083.2005 · Cited by 83
Genetic Evidence for a Link Between Glycolysis and DNA Replication
Jannière, L., Canceill, D., Suski, C., Kanga, S., Dalmais, B., Lestini, R., Monnier, A.-F., Chapuis, J., Bolotin, A., Алексеевна, Т. М., et al. (2007) · PLoS ONE · doi:10.1371/journal.pone.0000447 · Cited by 85
Brca2, Rad51 and Mre11: Performing balancing acts on replication forks
Costanzo, V. (2011) · DNA repair · doi:10.1016/j.dnarep.2011.07.009 · Cited by 85
Avoiding and resolving conflicts between DNA replication and transcription
Rudolph, C. J., Dhillon, P., Moore, T., & LLOYD, R. (2007) · DNA repair · doi:10.1016/j.dnarep.2007.02.017 · Cited by 78
Sgs1 Regulates Gene Conversion Tract Lengths and Crossovers Independently of Its Helicase Activity
Lo, Y., Paffett, K. S., Amit, O., Clikeman, J. A., Sterk, R. T., Brenneman, M. A., & Nickoloff, J. A. (2006) · Molecular and Cellular Biology · doi:10.1128/mcb.00136-06 · Cited by 77
Replication fork stalling and cell cycle arrest in UV-irradiated Escherichia coliPreprint
Rudolph, C. J., Upton, A. L., & Lloyd, R. G. (2007) · Genes & Development · doi:10.1101/gad.417607 · Cited by 76
Consider the workhorse: Nonhomologous end-joining in budding yeast
Emerson, C. H., & Bertuch, A. A. (2016) · Biochemistry and Cell Biology · doi:10.1139/bcb-2016-0001 · Cited by 71
Distinct roles for two RAD51-related genes in Trypanosoma brucei antigenic variation
Proudfoot, C. (2005) · Nucleic Acids Research · doi:10.1093/nar/gki996 · Cited by 76
Coevolution of the Organization and Structure of Prokaryotic GenomesPreprint
Touchon, M., & Rocha, E. P. C. (2016) · Cold Spring Harbor Perspectives in Biology · doi:10.1101/cshperspect.a018168 · Cited by 81
Comprehensive prediction of chromosome dimer resolution sites in bacterial genomes
Kono, N., Arakawa, K., & Tomita, M. (2011) · BMC Genomics · doi:10.1186/1471-2164-12-19 · Cited by 73
Srougi, M. C., Reinicke, K. E., Dong, Y., Bey, E. A., & Boothman, D. A. (2007) · Cancer Research · doi:10.1158/0008-5472.can-07-0935 · Cited by 73
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Marceau, A. H. (2012) · Methods in molecular biology · doi:10.1007/978-1-62703-032-8_1 · Cited by 74
Metadata
- Authors
- Michel, B., Grompone, G., Florès, M.-J., & Bidnenko, V.
- Affiliations
- Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (FR)
- Laboratoire de Génétique Microbienne, Institut National de la Recherche Agronomique, 78352 Jouy en Josas Cedex, France
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2004-08-24
- Volume
- 101
- Issue
- 35
- Pages
- 12783-12788
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC516472
- OpenAlex
- W2114809602
- Cited by
- 322
- References
- 71
- Citations by year
- 2025: 2 · 2024: 3 · 2023: 3 · 2022: 3 · 2021: 4 · 2020: 11 · 2019: 6 · 2018: 8 · 2017: 6 · 2016: 13 · 2015: 8 · 2014: 18 · 2013: 13 · 2012: 16
- FWCI
- 3.31
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › DNA Repair Mechanisms
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Fungal and yeast genetics research
- Keywords
- replication fork restart, stalled replication forks, recombination proteins, genomic instability, strand exchange
- MeSH terms
- Bacteria, DNA, DNA Repair, DNA Replication, Mutation, DNA Gyrase
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