Phospholipid dysregulation contributes to ApoE4-associated cognitive deficits in Alzheimer’s disease pathogenesis
Open accessAbstract
Significance: The apolipoprotein E4 (ApoE4) genotype is the strongest genetic risk factor for developing Alzheimer’s disease (AD). However, the mechanisms that underlie this link between ApoE4 genotype and AD are not well understood. Our data in this paper are the first mechanistic studies to our knowledge that link ApoE4 genotype-specific changes in brain phospholipid homeostasis to ApoE4-increased susceptibility to develop AD. Our studies indicate previously unidentified therapeutic options for the treatment of AD, targeting ApoE4’s pathogenic nature.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
ApoE participates in brain phospholipid homeostasis in an isoform-dependent manner.
“ApoE participates in the brain phospholipid homeostasis in an isoform-dependent manner.”
From Apolipoprotein E metabolism and functions in brain and its role in Alzheimer's disease (2017) · cites this paper as [46]
In humans, ApoE knock-in mice, and primary neurons, ApoE3 regulates brain PIP2 via suppressing the level of synaptojanin 1.
“In a set of experiments in humans, ApoE knock-in mice, and primary neurons, ApoE3 regulates brain phosphoinositol biphosphate (PIP2) via suppressing the level of phosphoinositol phosphatase synaptojanin 1, a PIP2-degrading enzyme, while ApoE4 is dysfunctional in this process [46].”
From Apolipoprotein E metabolism and functions in brain and its role in Alzheimer's disease (2017) · cites this paper as [46]
In humans, ApoE knock-in mice, and primary neurons, ApoE4 is dysfunctional in the process of ApoE3 regulation of brain PIP2 via synaptojanin 1.
“In a set of experiments in humans, ApoE knock-in mice, and primary neurons, ApoE3 regulates brain phosphoinositol biphosphate (PIP2) via suppressing the level of phosphoinositol phosphatase synaptojanin 1, a PIP2-degrading enzyme, while ApoE4 is dysfunctional in this process [46].”
From Apolipoprotein E metabolism and functions in brain and its role in Alzheimer's disease (2017) · cites this paper as [46]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Harold, D., Abraham, R., Hollingworth, P., Sims, R., Gerrish, A., Hamshere, M. L., Pahwa, J. S., Moskvina, V., Dowzell, K., Williams, A., et al. (2009) · Nature Genetics · doi:10.1038/ng.440 · Cited by 3,326 · see citing works
Human ApoE isoforms differentially regulate brain amyloid-β peptide clearance
Castellano, J. M., Kim, J., Stewart, F. R., Jiang, H., DeMattos, R. B., Patterson, B. W., Fagan, A. M., Morris, J. C., Mawuenyega, K. G., Cruchaga, C., et al. (2011) · Science Translational Medicine · doi:10.1126/scitranslmed.3002156 · Cited by 1,227 · cited 2× · see citing works
“These data are consistent with previous reports that ApoE genotypes do not affect APP processing but instead regulate Aβ degradation (2, 3).”
BackgroundResultSelf-citationKawarabayashi, T., Younkin, L. H., Saido, T. C., Shoji, M., Ashe, K. H., & Younkin, S. G. (2001) · The Journal of Neuroscience · doi:10.1523/jneurosci.21-02-00372.2001 · Cited by 1,053 · see citing works
Rare coding variants in the phospholipase D3 gene confer risk for Alzheimer’s disease
Cruchaga, C., Karch, C. M., Jin, S. C., Benitez, B. A., Cai, Y., Guerreiro, R., Harari, O., Norton, J., Budde, J., Bertelsen, S., et al. (2014) · Nature · doi:10.1038/nature12825 · Cited by 461 · see citing works
Treusch, S., Hamamichi, S., Goodman, J. L., Matlack, K. E. S., Chung, C. Y., Baru, V., Shulman, J. M., Parrado, A., Bevis, B. J., Valastyan, J. S., et al. (2011) · Science · doi:10.1126/science.1213210 · Cited by 379 · see citing works
Howlett, D. R., Richardson, J. C., Austin, A., Parsons, A. A., Bate, S. T., Davies, D. C., & Gonzalez, M. I. (2004) · Brain Research · doi:10.1016/j.brainres.2004.05.029 · Cited by 212 · see citing works
Landman, N., Jeong, S. Y., Shin, S. Y., Voronov, S. V., Serban, G., Kang, M. S., Park, M. K., Di Paolo, G., Chung, S., & Kim, T.-W. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0604954103 · Cited by 149 · see citing works
Mak, A. C. Y., Pullinger, C. R., Tang, L. F., Wong, J. S., Deo, R. C., Schwarz, J.-M., Gugliucci, A., Movsesyan, I., Ishida, B. Y., Chu, C., et al. (2014) · JAMA Neurology · doi:10.1001/jamaneurol.2014.2011 · Cited by 96 · see citing works
Apolipoprotein E as a β-amyloid-independent factor in Alzheimer’s disease
Wolf, A. B., Valla, J., Bu, G., Kim, J., LaDu, M., Reiman, E. M., & Caselli, R. J. (2013) · Alzheimer's Research & Therapy · doi:10.1186/alzrt204 · Cited by 55 · see citing works
Flagged first, then by citations
Research works printed but not linked: 33
- Li J, et al. (2012) Differential regulation of amyloid-β endocytic trafficking and lyso- somal degradation by apolipoprotein E isoforms. J Biol Chem 287(53):44593-44601.
- Holtzman DM, Herz J, Bu G (2012) Apolipoprotein E and apolipoprotein E receptors: Normal biology and roles in Alzheimer disease. Cold Spring Harb Perspect Med 2(3): a006312.
- Chan RB, et al. (2012) Comparative lipidomic analysis of mouse and human brain with Alzheimer disease. J Biol Chem 287(4):2678-2688.
- Kanfer JN, Pettegrew JW, Moossy J, McCartney DG (1993) Alterations of selected enzymes of phospholipid metabolism in Alzheimer's disease brain tissue as compared to non-Alzheimer's demented controls. Neurochem Res 18(3):331-334.
- Pettegrew JW, Panchalingam K, Hamilton RL, McClure RJ (2001) Brain membrane phospholipid alterations in Alzheimer's disease. Neurochem Res 26(7):771-782.
- Klunk WE, Panchalingam K, McClure RJ, Stanley JA, Pettegrew JW (1998) Metabolic alterations in postmortem Alzheimer's disease brain are exaggerated by Apo-E4. Neurobiol Aging 19(6):511-515.
- Mapstone M, et al. (2014) Plasma phospholipids identify antecedent memory im- pairment in older adults. Nat Med 20(4):415-418.
- Berman DE, et al. (2008) Oligomeric amyloid-beta peptide disrupts phosphatidylino- sitol-4,5-bisphosphate metabolism. Nat Neurosci 11(5):547-554.
- Gad H, et al. (2000) Fission and uncoating of synaptic clathrin-coated vesicles are perturbed by disruption of interactions with the SH3 domain of endophilin. Neuron 27(2):301-312.
- Grootendorst J, et al. (2005) Human apoE targeted replacement mouse lines: H-apoE4 and h-apoE3 mice differ on spatial memory performance and avoidance behavior. Behav Brain Res 159(1):1-14.
- Wang C, et al. (2005) Human apoE4-targeted replacement mice display synaptic deficits in the absence of neuropathology. Neurobiol Dis 18(2):390-398.
- Caselli RJ, et al. (2011) Longitudinal modeling of frontal cognition in APOE e4 ho- mozygotes, heterozygotes, and noncarriers. Neurology 76(16):1383-1388.
- Caselli RJ, et al. (2009) Longitudinal modeling of age-related memory decline and the APOE epsilon4 effect. N Engl J Med 361(3):255-263.
- Caselli RJ, et al. (2004) Longitudinal changes in cognition and behavior in asymp- tomatic carriers of the APOE e4 allele. Neurology 62(11):1990-1995.
- Caselli RJ (2009) Age-related memory decline and apolipoprotein E e4. Discov Med 8(41):47-50.
- Caselli RJ, et al. (2007) Cognitive domain decline in healthy apolipoprotein E epsilon4 homozygotes before the diagnosis of mild cognitive impairment. Arch Neurol 64(9): 1306-1311.
- Di Paolo G, De Camilli P (2006) Phosphoinositides in cell regulation and membrane dynamics. Nature 443(7112):651-657.
- McPherson PS, et al. (1996) A presynaptic inositol-5-phosphatase. Nature 379(6563): 353-357.
- Zhu L, et al. (2013) Reduction of synaptojanin 1 accelerates Aβ clearance and atten- uates cognitive deterioration in an Alzheimer mouse model. J Biol Chem 288(44): 32050-32063.
- McIntire LB, et al. (2012) Reduction of synaptojanin 1 ameliorates synaptic and be- havioral impairments in a mouse model of Alzheimer's disease. J Neurosci 32(44): 15271-15276.
- Liu CC, Kanekiyo T, Xu H, Bu G (2013) Apolipoprotein E and Alzheimer disease: Risk, mechanisms and therapy. Nat Rev Neurol 9(2):106-118.
- Voronov SV, et al. (2008) Synaptojanin 1-linked phosphoinositide dyshomeostasis and cognitive deficits in mouse models of Down's syndrome. Proc Natl Acad Sci USA 105(27):9415-9420.
- Nasuhoglu C, et al. (2002) Nonradioactive analysis of phosphatidylinositides and other anionic phospholipids by anion-exchange high-performance liquid chromatography with suppressed conductivity detection. Anal Biochem 301(2):243-254.
- Rodriguez GA, Burns MP, Weeber EJ, Rebeck GW (2013) Young APOE4 targeted re- placement mice exhibit poor spatial learning and memory, with reduced dendritic spine density in the medial entorhinal cortex. Learn Mem 20(5):256-266.
- Cremona O, et al. (1999) Essential role of phosphoinositide metabolism in synaptic vesicle recycling. Cell 99(2):179-188.
- Xu H, et al. (1998) Estrogen reduces neuronal generation of Alzheimer beta-amyloid peptides. Nat Med 4(4):447-451.
- Berg I, Nilsson KP, Thor S, Hammarström P (2010) Efficient imaging of amyloid de- posits in Drosophila models of human amyloidoses. Nat Protoc 5(5):935-944.
- Lane RF, et al. (2010) Diabetes-associated SorCS1 regulates Alzheimer's amyloid-beta metabolism: Evidence for involvement of SorL1 and the retromer complex. J Neurosci 30(39):13110-13115.
- Huttner WB, DeGennaro LJ, Greengard P (1981) Differential phosphorylation of multiple sites in purified protein I by cyclic AMP-dependent and calcium-dependent protein kinases. J Biol Chem 256(3):1482-1488.
- Cuadrado A, García-Fernández LF, Imai T, Okano H, Muñoz A (2002) Regulation of tau RNA maturation by thyroid hormone is mediated by the neural RNA-binding protein musashi-1. Mol Cell Neurosci 20(2):198-210.
- Tani H, Akimitsu N (2012) Genome-wide technology for determining RNA stability in mammalian cells: Historical perspective and recent advantages based on modified nucleotide labeling. RNA Biol 9(10):1233-1238.
- Elder GA, et al. (2012) Blast exposure induces post-traumatic stress disorder-related traits in a rat model of mild traumatic brain injury. J Neurotrauma 29(16):2564-2575.
- Buxbaum JD, et al. (1990) Processing of Alzheimer beta/A4 amyloid precursor protein: Modulation by agents that regulate protein phosphorylation. Proc Natl Acad Sci USA 87(15):6003-6006.
Cited by
Sorted by citations
Endo-lysosomal dysregulations and late-onset Alzheimer’s disease: impact of genetic risk factors
Van Acker, Z. P., Bretou, M., & Annaert, W. (2019) · Molecular Neurodegeneration · doi:10.1186/s13024-019-0323-7 · Cited by 222 · see citing works
REST and neural gene network dysregulation in iPSC models of Alzheimer’s disease
Meyer, K., Feldman, H. M., Lu, T., Drake, D., Lim, E. T., Ling, K.-H., Bishop, N. A., Pan, Y., Seo, J., Lin, Y.-T., et al. (2019) · Cell Reports · doi:10.1016/j.celrep.2019.01.023 · Cited by 216 · see citing works
Apolipoprotein E metabolism and functions in brain and its role in Alzheimer's disease
Liao, F., Yoon, H., & Kim, J. (2017) · Current Opinion in Lipidology · doi:10.1097/mol.0000000000000383 · Cited by 191 · see citing works
The cell biology of APOE in the brain
Windham, I. A., & Cohen, S. (2024) · Trends in Cell Biology · doi:10.1016/j.tcb.2023.09.004 · Cited by 103 · see citing works
Membrane raft domains and remodeling in aging brain
Colin, J., Gregory-Pauron, L., Lanhers, M.-C., Claudepierre, T., Corbier, C., Yen, F. T., Malaplate-Armand, C., & Oster, T. (2016) · Biochimie · doi:10.1016/j.biochi.2016.08.014 · Cited by 55 · see citing works
Sex specific molecular networks and key drivers of Alzheimer’s disease
Guo, L., Cao, J., Hou, J., Li, Y., Huang, M., Zhu, L., Zhang, L., Lee, Y., Duarte, M. L., Zhou, X., et al. (2023) · Molecular Neurodegeneration · doi:10.1186/s13024-023-00624-5 · Cited by 49 · see citing works
Self-citation
- Authors
- Zhu, L., Zhong, M., Elder, G. A., Sano, M., Holtzman, D. M., Gandy, S., Cardozo, C., Haroutunian, V., Robakis, N. K., & Cai, D.
- Affiliations
- James J. Peters VA Medical Center (US)
- Westchester Medical Center (US)
- Washington University in St. Louis (US)
- Icahn School of Medicine at Mount Sinai (US)
- ORCID
- Venue
- Proceedings of the National Academy of Sciences
- Publisher
- National Academy of Sciences
- Published
- 2015-09-08
- Volume
- 112
- Issue
- 38
- Pages
- 11965-11970
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- PMC
- PMC4586834
- OpenAlex
- W2134475193
- Cited by
- 160
- References
- 9
- Citations by year
- 2026: 10 · 2025: 11 · 2024: 29 · 2023: 9 · 2022: 11 · 2021: 11 · 2020: 18 · 2019: 24 · 2018: 7 · 2017: 15 · 2016: 13 · 2015: 2
- FWCI
- 9.09
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Proceedings of the National Academy of Sciences (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Alzheimer Association (NIRP14-304720)
- U.S. Department of Veterans Affairs (RR&D 1I21RX001558-01A1, BLRD Cai-CDA Spring 2010, B9212C)
- HHS | National Institutes of Health (1RO1AG048923-01, #2P50AG005138-28, R37 #AG017926), #2R01AG008200)
- Topics
- Health Sciences › Medicine › Physiology › Alzheimer's disease research and treatments
- Health Sciences › Medicine › Psychiatry and Mental health › Dementia and Cognitive Impairment Research
- Life Sciences › Neuroscience › Neurology › Neuroinflammation and Neurodegeneration Mechanisms
- Keywords
- APOE ε4, Alzheimer's disease, phospholipid homeostasis, SYNJ1, phosphoinositide phosphatase, cognitive impairment, loss of function, APOE3, postmortem brain
- MeSH terms
- Aged, Aged, 80 and over, Alzheimer Disease, Animals, Astrocytes, Brain, Cognition Disorders, Female, Homeostasis, Humans, Male, Nerve Tissue Proteins, Neurons, Phospholipids, Phosphoric Monoester Hydrolases, Cohort Studies, Phosphatidylinositol Phosphates, Disease Progression, Mice, Apolipoprotein E4, Gene Knock-In Techniques
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review