The DOI matches its Crossref record; 22 of the 22 references it cites were found in a registry or an index.
“Black holes” and bacterial pathogenicity: A large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli
Open accessAbstract
Plasmids, bacteriophages, and pathogenicity islands are genomic additions that contribute to the evolution of bacterial pathogens. For example, Shigella spp., the causative agents of bacillary dysentery, differ from the closely related commensal Escherichia coli in the presence of a plasmid in Shigella that encodes virulence functions. However, pathogenic bacteria also may lack properties that are characteristic of nonpathogens. Lysine decarboxylase (LDC) activity is present in ≈90% of E. coli strains but is uniformly absent in Shigella strains. When the gene for LDC, cadA , was introduced into Shigella flexneri 2a, virulence became attenuated, and enterotoxin activity was inhibited greatly. The enterotoxin inhibitor was identified as cadaverine, a product of the reaction catalyzed by LDC. Comparison of the S. flexneri 2a and laboratory E. coli K-12 genomes in the region of cadA revealed a large deletion in Shigella . Representative strains of Shigella spp. and enteroinvasive E. coli displayed similar deletions of cadA . Our results suggest that, as Shigella spp. evolved from E. coli to become pathogens, they not only acquired virulence genes on a plasmid but also shed genes via deletions. The formation of these “black holes,” deletions of genes that are detrimental to a pathogenic lifestyle, provides an evolutionary pathway that enables a pathogen to enhance virulence. Furthermore, the demonstration that cadaverine can inhibit enterotoxin activity may lead to more general models about toxin activity or entry into cells and suggests an avenue for antitoxin therapy. Thus, understanding the role of black holes in pathogen evolution may yield clues to new treatments of infectious diseases.
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Cites
Experiments in molecular genetics
Miller, J. H. (1972) · Medical Entomology and Zoology · Cited by 27,157
Current protocols in molecular biology
(1988) · Trends in Biochemical Sciences · doi:10.1016/0968-0004(88)90131-4 · Cited by 4,160
Identification of Enterobacteriaceae.
Edwards, P. R., & Ewing, W. H. (1972) · Andalas University Repository (Andalas University) · Cited by 2,038
Casadaban, M. J. (1976) · Journal of Molecular Biology · doi:10.1016/0022-2836(76)90119-4 · Cited by 1,872
Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution
Hacker, J., Blum‐Oehler, G., Mühldorfer, I., & Tschäpe, H. (1997) · Molecular Microbiology · doi:10.1046/j.1365-2958.1997.3101672.x · Cited by 1,129
Singer, M., Baker, T. A., Schnitzler, G. R., Deischel, S. M., Goel, M. C., Dove, W. F., Siranosian, K. J., Grossman, A. D., Erickson, J. W., & Gross, C. A. (1989) · Microbiological Reviews · doi:10.1128/mmbr.53.1.1-24.1989 · Cited by 738
Vibrio cholerae produces a second enterotoxin, which affects intestinal tight junctions.
Fasano, A., Baudry, B., Pumplin, D. W., Wasserman, S. S., Tall, B. D., Ketley, J. M., & Kaper, J. B. (1991) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.88.12.5242 · Cited by 579
Self-citationLiu, S. L., Hessel, A., & Sanderson, K. E. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.14.6874 · Cited by 328
Sansonetti, P. J., Hale, T. L., Dammin, G. J., Kapfer, C., Collins, H. H., & Formal, S. B. (1983) · Infection and Immunity · doi:10.1128/iai.39.3.1392-1402.1983 · Cited by 299
Polynucleotide Sequence Relationships among Members of Enterobacteriaceae
Brenner, D. J., Fanning, G. R., Johnson, K. E., Citarella, R. V., & Falkow, S. (1969) · Journal of Bacteriology · doi:10.1128/jb.98.2.637-650.1969 · Cited by 254
Cited by
Kaper, J. B., Nataro, J. P., & Mobley, H. L. T. (2004) · Nature Reviews Microbiology · doi:10.1038/nrmicro818 · Cited by 5,583
Lateral gene transfer and the nature of bacterial innovation
Ochman, H., Lawrence, J. G., & Groisman, E. A. (2000) · Nature · doi:10.1038/35012500 · Cited by 3,816
Phages and the Evolution of Bacterial Pathogens: from Genomic Rearrangements to Lysogenic Conversion
Brüssow, H., Canchaya, C., & Hardt, W.-D. (2004) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.68.3.560-602.2004 · Cited by 1,725
Welch, R. A., Burland, V., Plunkett, G., Redford, P., Roesch, P., Rasko, D., Buckles, E. L., Liou, S.-R., Boutin, A., Hackett, J., et al. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.252529799 · Cited by 1,531
Genomic Islands in Pathogenic and Environmental Microorganisms
Dobrindt, U., Hochhut, B., Hentschel, U., & Hacker, J. (2004) · Nature Reviews Microbiology · doi:10.1038/nrmicro884 · Cited by 1,188
Metadata
- Authors
- Maurelli, A. T., Fernández, R. E., Bloch, C. A., Rode, C. K., & Fasano, A.
- Venue
- Proceedings of the National Academy of Sciences
- Published
- 1998-03-31
- Volume
- 95
- Issue
- 7
- Pages
- 3943-3948
- ISSN
- 0027-8424 (ISSN-L)
- 1091-6490
- OpenAlex
- W1984159720
- Cited by
- 457
- References
- 22
- FWCI
- 10.50
- Type
- journal article
- Language
- en
- Open access
- green
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- Maurelli, A. T., Fernández, R. E., Bloch, C. A., Rode, C. K., & Fasano, A. (1998). “Black holes” and bacterial pathogenicity: A large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.95.7.3943
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