Intestinal phages interact with bacteria and are involved in human diseases

Diversity of the Human Intestinal Microbial Flora

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A metagenome-wide association study of gut microbiota in type 2 diabetes

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Gut metagenome in European women with normal, impaired and diabetic glucose control

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Short-chain fatty acids stimulate glucagon-like peptide-1 secretion via the G-protein-coupled receptor FFAR2

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<i>Fusobacterium nucleatum</i> infection is prevalent in human colorectal carcinoma

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Lysogenic Conversion by a Filamentous Phage Encoding Cholera Toxin

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Disease-Specific Alterations in the Enteric Virome in Inflammatory Bowel Disease

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Development and Use of Personalized Bacteriophage-Based Therapeutic Cocktails To Treat a Patient with a Disseminated Resistant Acinetobacter baumannii Infection

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Viruses in the faecal microbiota of monozygotic twins and their mothers

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The effects of intestinal tract bacterial diversity on mortality following allogeneic hematopoietic stem cell transplantation

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Efficacy and tolerability of a cocktail of bacteriophages to treat burn wounds infected by Pseudomonas aeruginosa (PhagoBurn): a randomised, controlled, double-blind phase 1/2 trial

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An expansion of rare lineage intestinal microbes characterizes rheumatoid arthritis

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<i>Escherichia coli</i> induces DNA damage in vivo and triggers genomic instability in mammalian cells

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Bacteriophage targeting of gut bacterium attenuates alcoholic liver disease

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Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system

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Sequence-specific antimicrobials using efficiently delivered RNA-guided nucleases

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The Human Gut Virome Is Highly Diverse, Stable, and Individual Specific

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Discovery and characterization of gut microbiota decarboxylases that can produce the neurotransmitter tryptamine

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Phage selection restores antibiotic sensitivity in MDR Pseudomonas aeruginosa

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Lytic to temperate switching of viral communities

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Communication between viruses guides lysis–lysogeny decisions

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The Bacteroides fragilis toxin gene is prevalent in the colon mucosa of colorectal cancer patients

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Contribution of bacterial outer membrane vesicles to innate bacterial defense

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Shiga-Like Toxin-Converting Phages from Escherichia coli Strains That Cause Hemorrhagic Colitis or Infantile Diarrhea

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Expansion of Bacteriophages Is Linked to Aggravated Intestinal Inflammation and Colitis

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Massive expansion of human gut bacteriophage diversity

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Dynamic modulation of the gut microbiota and metabolome by bacteriophages in a mouse model

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Fecal Microbiota Composition Differs Between Children With β-Cell Autoimmunity and Those Without

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A DNA nanodevice-based vaccine for cancer immunotherapy

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Oral Phage Therapy of Acute Bacterial Diarrhea With Two Coliphage Preparations: A Randomized Trial in Children From Bangladesh

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Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome

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Healthy human gut phageome

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Prophages mediate defense against phage infection through diverse mechanisms

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Temperate and lytic bacteriophages programmed to sensitize and kill antibiotic-resistant bacteria

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BREX is a novel phage resistance system widespread in microbial genomes

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A novel mechanism for the biogenesis of outer membrane vesicles in Gram-negative bacteria

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Virus Population Dynamics and Acquired Virus Resistance in Natural Microbial Communities

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Synergy between the Host Immune System and Bacteriophage Is Essential for Successful Phage Therapy against an Acute Respiratory Pathogen

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Phage-guided modulation of the gut microbiota of mouse models of colorectal cancer augments their responses to chemotherapy

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Molecular and Evolutionary Determinants of Bacteriophage Host Range

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Safety of bacteriophage therapy in severe Staphylococcus aureus infection

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Gut Dysbiosis and Detection of “Live Gut Bacteria” in Blood of Japanese Patients With Type 2 Diabetes

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Phages rarely encode antibiotic resistance genes: a cautionary tale for virome analyses

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Engineering Modular Viral Scaffolds for Targeted Bacterial Population Editing

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Application of a Neutral Community Model To Assess Structuring of the Human Lung Microbiome

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The gene for toxic shock toxin is carried by a family of mobile pathogenicity islands in Staphylococcus aureus

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Landscapes of bacterial and metabolic signatures and their interaction in major depressive disorders

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Cross-reactivity between tumor MHC class I–restricted antigens and an enterococcal bacteriophage

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Alterations in Enteric Virome Are Associated With Colorectal Cancer and Survival Outcomes

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Bacteriophage Transcytosis Provides a Mechanism To Cross Epithelial Cell Layers

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A bacteriophage encodes its own CRISPR/Cas adaptive response to evade host innate immunity

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Fecal microbiota transplantation for patients with steroid-resistant acute graft-versus-host disease of the gut

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Bacteriophage transfer during faecal microbiota transplantation in Clostridium difficile infection is associated with treatment outcome

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DISARM is a widespread bacterial defence system with broad anti-phage activities

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Statistical structure of host–phage interactions

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Phage-Mediated Intergeneric Transfer of Toxin Genes

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Diagnostic potential and interactive dynamics of the colorectal cancer virome

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Bioinorganic hybrid bacteriophage for modulation of intestinal microbiota to remodel tumor-immune microenvironment against colorectal cancer

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Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children

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Standardized bacteriophage purification for personalized phage therapy

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The stepwise assembly of the neonatal virome is modulated by breastfeeding

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Gut microbiota and GLP-1

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Faecal virome transplantation decreases symptoms of type 2 diabetes and obesity in a murine model

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Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

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Role of the Gut Microbiome in Modulating Arthritis Progression in Mice

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A cocktail of three virulent bacteriophages prevents Vibrio cholerae infection in animal models

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Intestinal microbiota in health and disease

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In Vivo Targeting of Clostridioides difficile Using Phage-Delivered CRISPR-Cas3 Antimicrobials

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Molecular genetics of SaPI1 – a mobile pathogenicity island in Staphylococcus aureus

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Escherichia coli K1's Capsule Is a Barrier to Bacteriophage T7

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A human gut phage catalog correlates the gut phageome with type 2 diabetes

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Stool Microbiota at Neutrophil Recovery Is Predictive for Severe Acute Graft vs Host Disease After Hematopoietic Cell Transplantation

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Dual-Surface-Modified Bacteriophage MS2 as an Ideal Scaffold for a Viral Capsid-Based Drug Delivery System

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The Spatial Heterogeneity of the Gut Limits Predation and Fosters Coexistence of Bacteria and Bacteriophages

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Vibrio cholerae Outer Membrane Vesicles Inhibit Bacteriophage Infection

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Modulation of Inflammatory Arthritis in Mice by Gut Microbiota Through Mucosal Inflammation and Autoantibody Generation

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A jumbo phage that forms a nucleus-like structure evades CRISPR–Cas DNA targeting but is vulnerable to type III RNA-based immunity

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Efficacy and Pharmacokinetics of Bacteriophage Therapy in Treatment of Subclinical Staphylococcus aureus Mastitis in Lactating Dairy Cattle

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Therapeutic Characterization and Efficacy of Bacteriophage Cocktails Infecting Escherichia coli, Klebsiella pneumoniae, and Enterobacter Species

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Phage‐Enabled Nanomedicine: From Probes to Therapeutics in Precision Medicine

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Acquisition of Phage Sensitivity by Bacteria through Exchange of Phage Receptors

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Phage Therapy in Managing Multidrug-Resistant (MDR) Infections in Cancer Therapy: Innovations, Complications, and Future Directions

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Does Phage Therapy Need a Pan-Phage?

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The Potential of Co-Evolution and Interactions of Gut Bacteria–Phages in Bamboo-Eating Pandas: Insights from Dietary Preference-Based Metagenomic Analysis

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Epseptimavirus KKP3831 – a new species of Salmonella-specific virulent phage: comprehensive biological and genomic characterization and potential for translocation through the intestinal epithelium

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Bacteriophages, Antibiotics and Probiotics: Exploring the Microbial Battlefield of Colorectal Cancer

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Bacteriophages for the Treatment of Resistant Bacterial Infectious Diseases

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A promising approach to diabetic osteoporosis: oxymatrine’s effects on gut microbiota and osteoblasts

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Phenotypic Characterization and Genome Analysis of New Broad-Spectrum Virulent Salmophage, Salmonella Phage KKP_3822, for Biocontrol of Multidrug-Resistant Salmonella enterica Strains

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Melatonin: The potential avenues in dentistry

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Phage-Microbiota Interactions in the Gut: Implications for Health and Therapeutic Strategies

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An Exploration of the Relationship Between Gut Virome and Cardiovascular Disease: A Comprehensive Review

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Uncovering the effects of Giardia duodenalis on the balance of DNA viruses and bacteria in children's gut microbiota

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A Combination of Virulent and Non-Productive Phages Synergizes the Immune System against Salmonella Typhimurium Systemic Infection

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Injectable hydrogel loaded with electrostatic self-assembled structure nanoparticles for the treatment of inflammatory bowel disease

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Harnessing Gut Microbiome–Brain–Liver Crosstalk: Novel Therapeutic Strategies for Metabolic Dysfunction‐Associated Steatotic Liver Disease

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Microbial dysbiosis in cholangiocarcinoma

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Intestinal Microbes, Metabolites, and Hormones in Alcohol-Associated Liver Disease

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Monocytes serve as Shiga toxin carriers during the development of hemolytic uremic syndrome

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Gut virus axis: Unravelling viral contribution to gut microbiota dysbiosis and translational medicine in inflammatory bowel disease

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Investigating the survival and activity of a bacteriophage in the complex colon environment with the use of a dynamic model of the colon (TIM-2)

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Detonating a “time bomb”: how enteric infection stress triggers prophage induction in commensal microbiota and exacerbates disease progression

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Therapeutic Options for Diarrheagenic Escherichia coli

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Gut microbial subtypes and clinicopathological value for colorectal cancer

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Viewing Psychiatric Disorders Through Viruses: Simple Architecture, Burgeoning Implications

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Discovery of human gut phage-encoded anti-CRISPR proteins unveils diverse mechanisms for phages to evade type II CRISPR immunity

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From dysbacteriosis to ecological remodeling: A new breakthrough in microbial treatment of inflammatory bowel disease

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The mycobiome, virome and archaeome in gastrointestinal cancers: molecular pathogenesis and therapeutic intervention

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The gut microbiome in colorectal cancer: molecular paradigms and translational frontiers

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A comprehensive review on CRISPR-Cas9 in revolutionizing food and agricultural sectors

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A nested case-control study on the association of gut virome in early pregnancy and gestational diabetes mellitus

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Phage Power: Harnessing Nature’s Arsenal in the Battle Against Microbial Threats for Sustainable Healthcare

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Human Gut Bacteriophageome: Insights Into Drug Resistance Mechanisms in Tuberculosis

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Complete genome sequence of a Kayfunavirus bacteriophage identified in Blantyre, Malawi

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The Intricate Interplay of Noncoding RNAs and the Gut Microbiome in Gastrointestinal and Endocrine-Related Cancers

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Mechanism Study on the Regulation of Intestinal Microecology by Hangover Liver‐Protecting Beverage for the Treatment of Alcoholic Liver Disease

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Integrative profiling of gut microbiome, bacteriophagenome, and predicted metabolome in obese adults: novel insights into intervention targets

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Influence of the Gut-Brain Axis on Psychiatric Comorbidity in Inflammatory Bowel Disease

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Structural and Functional Diversity of RNA ‐Containing Toxin–Antitoxin Systems

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CD8 + T cells may mediate the effect of gut microbiota on psoriasis: evidence from two-step mendelian randomization and bayesian weighting

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Engineering the microbiome: A novel frontier in inflammatory bowel disease treatment

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Bacteria, Viruses, and the Microbiome

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Monocytes Serve as Shiga Toxin Carrier During the Development of Hemolytic Uremic SyndromePreprint

Sun, X., Qu, S., Shi, F., Wu, Y., Gu, L., Liu, M., Bian, Z., Shi, L., Liu, Z., Liu, Y., et al. (2024) · SSRN Electronic Journal · doi:10.2139/ssrn.4802682

Diversity and potential host-interactions of gut viruses in the black-necked crane (Grus nigricollis)Preprint

Li, W., Yu, M., Lin, Q., Xiong, Y., Yao, Y., Xu, H., He, G., & Zhao, J. (2024) · doi:10.22541/au.171827167.71833789/v1

Triadic Dynamics of Gastric Bacterial Microbiome, Phageome, and Host Genotype, with Implications for Disease AssociationsPreprint

Szymczak, A., Gembara, K., Majewska, J., Miernikiewicz, P., Ferenc, S., Gnus, J. J., Kłak, M., Jędruchniewicz, N., Witkiewicz, W., & Dąbrowska, K. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.06.16.598898

Le viróme humain : un écosystème viral dans notre corps

Ottmann, M. (2024) · Revue Francophone des Laboratoires · doi:10.1016/s1773-035x(24)76115-2

Discovery of Alzheimer's disease-associated sequence and Caudoviricetes prophage markers in metagenomics of type 2 diabetes and associated medical conditions

Paley, E. L. (2024) · Elsevier eBooks · doi:10.1016/b978-0-443-28830-2.00003-8

The Battle Within: Interactions of Bacteriophages and Bacteria in the Gastrointestinal Tract

Sordi, L. D., Lourenço, M., & Debarbieux, L. (2019) · Cell Host & Microbe · doi:10.1016/j.chom.2019.01.018 · Cited by 163 · see citing works

Bacteriophages: a double-edged sword in the gastrointestinal tract

Wei, Y., & Zhou, C. (2024) · Frontiers in Microbiomes · doi:10.3389/frmbi.2024.1450523 · Cited by 11 · see citing works

Addressing the impact of phages on gut microbial ecology and functions using a synthetic bacterial community

von Strempel, A. (2024) · doi:10.5282/edoc.34192

Ménage à trois in the human gut: interactions between host, bacteria and phages

Mirzaei, M. K., & Maurice, C. F. (2017) · Nature Reviews Microbiology · doi:10.1038/nrmicro.2017.30 · Cited by 404 · see citing works

Current Status of Phage Therapy against Infectious Diseases and Potential Application beyond Infectious Diseases

Xu, H., Xu, W., & Zhang, L. (2022) · International Journal of Clinical Practice · doi:10.1155/2022/4913146 · Cited by 25 · see citing works