Structural and practical identifiability analysis of partially observed dynamical models by exploiting the profile likelihood

Cited by (1,414)

Items 101–200 of 1,414

  1. Experimental and computational analyses reveal that environmental restrictions shape HIV-1 spread in 3D cultures
    Imle, Andrea, Kumberger, Peter, Schnellbächer, Nikolas D., Fehr, Jana, Carrillo-Bustamante, Paola, Ales, Janez, Schmidt, Philip, Ritter, Christian, Godinez, William J., Müller, Barbara et al. · 2019 · Nature Communications
  2. Cell-Free Gene Expression Dynamics in Synthetic Cell Populations
    David T. Gonzales, Naresh Yandrapalli, Tom Robinson, Christoph Zechner, T.‐Y. Dora Tang · 2022 · ACS Synthetic Biology
  3. Model-Based Methods in the Biopharmaceutical Process Lifecycle
    Paul Kröll, Alexandra Hofer, Sophia Ulonska, Julian Kager, Christoph Herwig · 2017 · Pharmaceutical Research
  4. Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression
    Shaolong Cao, Jennifer Rui Wang, Shuangxi Ji, Yang Peng, Yaoyi Dai, Shuai Guo, Matthew D. Montierth, John Paul Shen, Xiao Hong Zhao, Jingxiao Chen et al. · 2022 · Nature Biotechnology
  5. IKAP: A heuristic framework for inference of kinase activities from Phosphoproteomics data
    Mischnik, Marcel, Sacco, Francesca, Cox, Jürgen, Schneider, Hans-Christoph, Schäfer, Matthias, Hendlich, Manfred, Crowther, Daniel, Mann, Matthias, Klabunde, Thomas · 2016 · Bioinformatics
  6. Fundamental limitations of network reconstruction from temporal data
    Marco Tulio Angulo, Jaime A. Moreno, Gábor Lippner, Albert-Ĺaszló Barabási, Yang‐Yu Liu · 2017 · Journal of The Royal Society Interface
  7. Quantitative Systems Pharmacology: An Exemplar Model‐Building Workflow With Applications in Cardiovascular, Metabolic, and Oncology Drug Development
    Gabriel Helmlinger, Victor V. Sokolov, Kirill V. Peskov, K. Melissa Hallow, Yuri Kosinsky, Veronika Voronova, Lulu Chu, Tatiana A. Yakovleva, Ivan Azarov, Daniel Kaschek et al. · 2019 · CPT Pharmacometrics & Systems Pharmacology
  8. Identification of parameter correlations for parameter estimation in dynamic biological models
    Pu Li, Quoc Dong Vu · 2013 · BMC Systems Biology
  9. Predator–prey dynamics and the plasticity of predator body size
    John P. DeLong, Torrance C. Hanley, David A. Vasseur · 2013 · Functional Ecology
  10. An integrated strategy for prediction uncertainty analysis
    Vanlier, J., Tiemann, C.A., Hilbers, P.A.J., van Riel, N.A.W. · 2012 · Bioinformatics
  11. Orthogonal Optogenetic Triple-Gene Control in Mammalian Cells
    Konrad Müller, Raphael Engesser, Jens Timmer · 2014 · ACS Synthetic Biology
  12. Quantitative analysis of tumour spheroid structure
    Alexander P. Browning, Jesse A Sharp, Ryan J Murphy, Gency Gunasingh, Brodie Lawson, Kevin Burrage, Nikolas K. Haass, Matthew J. Simpson · 2021 · eLife
  13. Modelling reveals novel roles of two parallel signalling pathways and homeostatic feedbacks in yeast
    Jörg Schaber, Rodrigo Baltanás, Alan Bush, Edda Klipp, Alejandro Colman‐Lerner · 2012 · Molecular Systems Biology
  14. Modeling Biphasic Environmental Decay of Pathogens and Implications for Risk Analysis
    Andrew F. Brouwer, Marisa C. Eisenberg, Justin V. Remais · 2017 · Environmental Science & Technology
  15. Parameter identifiability of power-law biochemical system models
    Srinath, Sridharan, Gunawan, Rudiyanto · 2010 · Journal of Biotechnology
  16. Bayesian updating and identifiability assessment of nonlinear finite element models
    Mukesh Kumar Ramancha, Rodrigo Astroza, Ramin Madarshahian, Joel P. Conte · 2021 · Mechanical Systems and Signal Processing
  17. Reaction–Diffusion Patterning of DNA-Based Artificial Cells
    Adrian Leathers, Michal Walczak, Ryan A. Brady, Assala Al Samad, Jurij Kotar, Michael J. Booth, Pietro Cicuta, Lorenzo Di Michele · 2022 · Journal of the American Chemical Society
  18. Analysis of mutational signatures with yet another package for signature analysis
    Daniel Hübschmann, Lea Jopp‐Saile, Carolin Andresen, Stephen Krämer, Zuguang Gu, Christoph E. Heilig, Simon Kreutzfeldt, Veronica Teleanu, Stefan Fröhling, Roland Eils et al. · 2020 · Genes Chromosomes and Cancer
  19. A quantitative map of nuclear pore assembly reveals two distinct mechanisms
    Shotaro Otsuka, Jeremy O. B. Tempkin, Wanlu Zhang, Antonio Zaccaria Politi, Arina Rybina, M. Julius Hossain, Moritz Kueblbeck, Andrea Callegari, Birgit Koch, Natalia Rosalía Morero et al. · 2023 · Nature
  20. A confidence building exercise in data and identifiability: Modeling cancer chemotherapy as a case study
    Marisa C. Eisenberg, Harsh Vardhan Jain · 2017 · Journal of Theoretical Biology
  21. Bayesian framework of parameter sensitivity, uncertainty, and identifiability analysis in complex water quality models
    Haifeng Jia, Te Xu, Shidong Liang, Pei Zhao, Changqing Xu · 2018 · Environmental Modelling & Software
  22. Circadian clock-dependent and -independent posttranscriptional regulation underlies temporal mRNA accumulation in mouse liver
    Jingkui Wang, Laura Symul, Jake Yeung, Cédric Gobet, Jonathan Sobel, Sarah Lück, Pål O. Westermark, Nacho Molina, Félix Naef · 2018 · Proceedings of the National Academy of Sciences
  23. Experimental Design for Parameter Estimation of Gene Regulatory Networks
    Bernhard Steiert, Andreas Raue, Jens Timmer, Clemens Kreutz · 2012 · PLoS ONE
  24. Ebola virus infection modeling and identifiability problems
    Vān Kính Nguyễn, Sebastian C. Binder, Alessandro Boianelli, Michael Meyer‐Hermann, Esteban Abelardo Hernandez-Vargas · 2015 · Frontiers in Microbiology
  25. CCND1–CDK4–mediated cell cycle progression provides a competitive advantage for human hematopoietic stem cells in vivo
    Nicole Mende, Erika E Kuchen, Mathias Lesche, Tatyana Grinenko, Konstantinos D. Kokkaliaris, Helmut Hanenberg, Dirk Lindemann, Andreas Dahl, Alexander Platz, Thomas Höfer et al. · 2015 · The Journal of Experimental Medicine
  26. High-dimensional Bayesian parameter estimation: Case study for a model of JAK2/STAT5 signaling
    Sabine Hug, Andreas Raue, Jan Hasenauer, Jasmin Bachmann, Ursula Klingmüller, Jens Timmer, Fabian Joachim Theis · 2013 · Mathematical Biosciences
  27. Best Practices to Maximize the Use and Reuse of Quantitative and Systems Pharmacology Models: Recommendations From the United Kingdom Quantitative and Systems Pharmacology Network
    Cucurull‐Sanchez, Lourdes, Chappell, Michael J., Chelliah, Vijayalakshmi, Amy Cheung, S. Y., Derks, Gianne, Penney, Mark, Phipps, Alex, Malik‐Sheriff, Rahuman S., Timmis, Jon, Tindall, Marcus J. et al. · 2019 · CPT: Pharmacometrics & Systems Pharmacology
  28. Predictive mathematical models of cancer signalling pathways
    Bachmann, J., Raue, A., Schilling, M., Becker, V., Timmer, J., Klingmüller, U. · 2012 · Journal of Internal Medicine
  29. Analysis of Practical Identifiability of a Viral Infection Model
    Vān Kính Nguyễn, Frank Klawonn, Rafael Mikolajczyk, Esteban Abelardo Hernandez-Vargas · 2016 · PLoS ONE
  30. Modeling the spread of fake news on Twitter
    Taichi Murayama, Shoko Wakamiya, Eiji Aramaki, Ryota Kobayashi · 2021 · PLoS ONE
  31. Performance of objective functions and optimisation procedures for parameter estimation in system biology models
    Andrea Degasperi, Dirk Fey, Boris Ν. Kholodenko · 2017 · npj Systems Biology and Applications
  32. Resolving the Combinatorial Complexity of Smad Protein Complex Formation and Its Link to Gene Expression
    Philippe Lucarelli, Marcel Schilling, Clemens Kreutz, Artyom Vlasov, Martin E. Boehm, Nao Iwamoto, Bernhard Steiert, Susen Lattermann, Marvin Wäsch, Markus Stepath et al. · 2017 · Cell Systems
  33. pyPESTO: a modular and scalable tool for parameter estimation for dynamic models
    Yannik Schälte, Fabian Fröhlich, Paul Jonas Jost, Jakob Vanhoefer, Dilan Pathirana, Paul L. Stapor, Polina Lakrisenko, Dantong Wang, Elba Raimúndez, Simon Merkt et al. · 2023 · Bioinformatics
  34. Changes in extreme precipitation over Spain using statistical downscaling of CMIP5 projections
    Robert Monjo, Emma Gaitán, Javier Pórtoles, Jaime Ribalaygua, Luis Torres · 2015 · International Journal of Climatology
  35. Dual-controlled optogenetic system for the rapid down-regulation of protein levels in mammalian cells
    Julia Baaske, Patrick Gonschorek, Raphael Engesser, Alazne Domínguez-Monedero, Katrin Raute, Patrick Fischbach, Konrad Müller, Élise Cachat, Wolfgang W A Schamel, Susana Minguet et al. · 2018 · Scientific Reports
  36. Practical identifiability of parametrised models: A review of benefits and limitations of various approaches
    Nicholas N. Lam, Paul D. Docherty, Rua Murray · 2022 · Mathematics and Computers in Simulation
  37. Structural identifiability of the generalized Lotka–Volterra model for microbiome studies
    Christopher H. Remien, Mariah J. Eckwright, Benjamin J. Ridenhour · 2021 · Royal Society Open Science
  38. Analysis of passive cardiac constitutive laws for parameter estimation using 3D tagged MRI
    Myrianthi Hadjicharalambous, Radomí­r Chabiniok, Liya Asner, Eva C. Sammut, James Wong, Gerald Carr‐White, Jack Lee, Reza Razavi, Nicolas P. Smith, David Nordsletten · 2014 · Biomechanics and Modeling in Mechanobiology
  39. Review: To be or not to be an identifiable model. Is this a relevant question in animal science modelling?
    Muñoz-Tamayo, R., Puillet, L., Daniel, J.B., Sauvant, D., Martin, O., Taghipoor, M., Blavy, P. · 2018 · animal
  40. Prediction uncertainty assessment of chromatography models using Bayesian inference
    Till Briskot, Ferdinand Stückler, Felix Wittkopp et al. · 2018 · Journal of Chromatography A
  41. Practical unidentifiability of a simple vector-borne disease model: Implications for parameter estimation and intervention assessment
    Yu-Han Kao, Marisa C. Eisenberg · 2018 · Epidemics
  42. A practical guide for the generation of model-based virtual clinical trials
    Craig, Morgan, Gevertz, Jana L., Kareva, Irina, Wilkie, Kathleen P. · 2023 · Frontiers in Systems Biology
  43. Uncertainty Analysis for Non-identifiable Dynamical Systems: Profile Likelihoods, Bootstrapping and More
    Fabian Fröhlich, Fabian Joachim Theis, Jan Hasenauer · 2014 · Lecture notes in computer science
  44. The Novel Coronavirus, 2019-nCoV, is Highly Contagious and More Infectious Than Initially Estimated
    Steven Sanche, Yen Ting Lin, Chonggang Xu, Ethan Obie Romero-Severson, Nicolas Hengartner, Ruian Ke · 2020 · arXiv (Cornell University)
  45. Benchmarking tools for a priori identifiability analysis
    Xabier Rey Barreiro, Alejandro F. Villaverde · 2023 · Bioinformatics
  46. ODE Constrained Mixture Modelling: A Method for Unraveling Subpopulation Structures and Dynamics
    Jan Hasenauer, Christine Hasenauer, Tim B. Hucho, Fabian Joachim Theis · 2014 · PLoS Computational Biology
  47. B Cell Development in the Bone Marrow Is Regulated by Homeostatic Feedback Exerted by Mature B Cells
    Gitit Lavy Shahaf, Simona Zisman‐Rozen, David Benhamou, Doron Melamed, Ramit Mehr · 2016 · Frontiers in Immunology
  48. BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data
    Fedor Kolpakov, Ilya R. Akberdin, Timur A. Kashapov, llya Kiselev, Semyon K. Kolmykov, Yury V. Kondrakhin, Elena O. Kutumova, Nikita Mandrik, Sergey S. Pintus, Anna Ryabova et al. · 2019 · Nucleic Acids Research
  49. Model‐based design of experiments for cellular processes
    Ankush Chakrabarty, Gregery T. Buzzard, Ann E. Rundell · 2013 · WIREs Systems Biology and Medicine
  50. Input-Dependent Structural Identifiability of Nonlinear Systems
    Alejandro F. Villaverde, Neil Darren Evans, Michael John Chappell · 2018 · IEEE Control Systems Letters
  51. Optimizing circadian drug infusion schedules towards personalized cancer chronotherapy
    Roger J. W. Hill, Pasquale F. Innominato, Francis Albert Lévi · 2020 · PLoS Computational Biology
  52. Modeling chemotherapy-induced stress to identify rational combination therapies in the DNA damage response pathway
    Ozan Alkan, Birgit Schoeberl, Millie Shah, Alexander Koshkaryev, Tim Heinemann, Daryl C. Drummond, Michael B. Yaffe, Andreas Raue · 2018 · Science Signaling
  53. Impact of a New SARS-CoV-2 Variant on the Population: A Mathematical Modeling Approach
    Gilberto González‐Parra, David Martínez‐Rodríguez, Rafael Jacinto Villanueva · 2021 · Mathematical and Computational Applications
  54. Solving inverse problems in building physics: An overview of guidelines for a careful and optimal use of data
    Simon Rouchier · 2018 · Energy and Buildings
  55. A Hierarchical, Data-Driven Approach to Modeling Single-Cell Populations Predicts Latent Causes of Cell-To-Cell Variability
    Carolin Loos, Katharina Moeller, Fabian Fröhlich, Tim B. Hucho, Jan Hasenauer · 2018 · Cell Systems
  56. Mean-Squared-Error Methods for Selecting Optimal Parameter Subsets for Estimation
    Kevin A. P. McLean, Shao-Hua Wu, Kimberley B. McAuley · 2012 · Industrial & Engineering Chemistry Research
  57. Understanding the mTOR signaling pathway via mathematical modeling
    Nurgazy Sulaimanov, Martin Klose, Hauke S. Busch, Melanie Boerries · 2017 · WIREs Systems Biology and Medicine
  58. Opportunities and challenges for modelling epidemiological and evolutionary dynamics in a multihost, multiparasite system: Zoonotic hybrid schistosomiasis in West Africa
    Anna Borlase, Joanne P. Webster, James W. Rudge · 2017 · Evolutionary Applications
  59. Plant-type phytoene desaturase: Functional evaluation of structural implications
    Julian Koschmieder, Mirjam Fehling-Kaschek, Patrick Schaub, Sandro Ghisla, Anton Brausemann, Jens Timmer, Peter Beyer · 2017 · PLoS ONE
  60. Temperature alters the shape of predator–prey cycles through effects on underlying mechanisms
    John P. DeLong, Shelby Lyon · 2020 · PeerJ
  61. Amortized Bayesian inference on generative dynamical network models of epilepsy using deep neural density estimators
    Meysam Hashemi, Anirudh Nihalani Vattikonda, Jayant Jha, Viktor Ší́p, Marmaduke Woodman, Fabrice Bartoloméi, Viktor Jirsa · 2023 · Neural Networks
  62. Structural Identifiability and Practical Applicability of an Alveolar Recruitment Model for ARDS Patients
    Christoph Schranz, Paul D. Docherty, Yeong Shiong Chiew · 2012 · IEEE Transactions on Biomedical Engineering
  63. Statistical analysis of nonlinear dynamical systems using differential geometric sampling methods
    Ben Calderhead, Mark Girolami · 2011 · Interface Focus
  64. Systems biology of JAK-STAT signalling in human malignancies
    Julio Vera, Katja Rateitschak, Falko Lange, Christina Kossow, Olaf Wolkenhauer A, Robert Jaster · 2011 · Progress in Biophysics and Molecular Biology
  65. Hierarchical effects of pro-inflammatory cytokines on the post-influenza susceptibility to pneumococcal coinfection
    Stefanie Duvigneau, Niharika Sharma-Chawla, Alessandro Boianelli, Sabine Stegemann‐Koniszewski, Vān Kính Nguyễn, Dunja Bruder, Esteban Abelardo Hernandez-Vargas · 2016 · Scientific Reports
  66. Comprehensive benchmarking of Markov chain Monte Carlo methods for dynamical systems
    Benjamin Ballnus, Sabine Hug, Kathrin Hatz, Linus Görlitz, Jan Hasenauer, Fabian Joachim Theis · 2017 · BMC Systems Biology
  67. Building Thermal-Network Models: A Comparative Analysis, Recommendations, and Perspectives
    Abhinandana Boodi, Karim Beddiar, Yassine Amirat, Mohamed Benbouzid · 2022 · Energies
  68. A Quantitative Systems Pharmacology Perspective on the Importance of Parameter Identifiability
    Anna Sher, Steven Niederer, Gary R. Mirams, Anna Kirpichnikova, Richard Allen, Pras Pathmanathan, David J. Gavaghan, Piet H. van der Graaf, Denis Noble · 2022 · Bulletin of Mathematical Biology
  69. Automatic Generation of Predictive Dynamic Models Reveals Nuclear Phosphorylation as the Key Msn2 Control Mechanism
    Mikael Sunnåker, Elías Zamora-Sillero, Reinhard Christoph Dechant, Christina Ludwig, Alberto Giovanni Busetto, Andreas Wagner, Jörg Stelling · 2013 · Science Signaling
  70. Mathematical Analysis of Glioma Growth in a Murine Model
    Erica M. Rutter, Tracy L. Stepien, Barrett J. Anderies et al. · 2017 · Scientific Reports
  71. Bridging the gap between measurements and modelling: a cardiovascular functional avatar
    Belén Casas, Jonas Lantz, Federica Viola · 2017 · Scientific Reports
  72. Influencing public health policy with data-informed mathematical models of infectious diseases: Recent developments and new challenges
    Amani A. Alahmadi, Sarah Belet, Andrew J. Black, Deborah Cromer, Jennifer A. Flegg, Thomas House, Pavithra Jayasundara, Jonathan Macgregor Keith, James M. McCaw, Robert G. Moss et al. · 2020 · Epidemics
  73. Lack of practical identifiability may hamper reliable predictions in COVID-19 epidemic models
    Luca Gallo, Mattia Frasca, Vito Latora, Giovanni Russo · 2022 · Science Advances
  74. Location‐scale models for meta‐analysis
    Wolfgang Viechtbauer, José A López-López · 2022 · Research Synthesis Methods
  75. Smooth functional tempering for nonlinear differential equation models
    David A. Campbell, Russell John Steele · 2011 · Statistics and Computing
  76. Disentangling molecular mechanisms regulating sensitization of interferon alpha signal transduction
    Frédérique Kok, Marcus Rosenblatt, Melissa Teusel, Tamar Nizharadze, Vladimir Gonçalves Magalhães, Christopher Dächert, Tim Maiwald, Artyom Vlasov, Marvin Wäsch, Silvana Tyufekchieva et al. · 2020 · Molecular Systems Biology
  77. Dynamic Modeling of Microalgae Growth and Lipid Production under Transient Light and Nitrogen Conditions
    Wang, Diyuan, Lai, Yi-Chun, Karam, Amanda L., de los Reyes, Francis L., Ducoste, Joel J. · 2019 · Environmental Science & Technology
  78. Minimal Out-of-Equilibrium Metabolism for Synthetic Cells: A Membrane Perspective
    Eleonora Bailoni, Michele Partipilo, Jelmer Coenradij, Douwe A. J. Grundel, Dirk Jan Slotboom, Bert Poolman · 2023 · ACS Synthetic Biology
  79. Optimal experiment design for model selection in biochemical networks
    Joep Vanlier, Christian A. Tiemann, P.A.J. Hilbers, Natal A. W. van Riel · 2014 · BMC Systems Biology
  80. Manifold learning for parameter reduction
    A. Holiday, M. Kooshkbaghi, J. Bello-Rivas, C. Gear, A. Zagaris, I. Kevrekidis · 2018 · Journal of Computational Physics
  81. Nonlinear Identifiability Analysis of the Porous Electrode Theory Model of Lithium-Ion Batteries
    Marc D. Berliner, Hongbo Zhao, Supratim Das, Michael A. Forsuelo, Benben Jiang, William C. Chueh, Martin Z. Bazant, Richard D. Braatz · 2021 · Journal of The Electrochemical Society
  82. Mechanistic platform knowledge of concomitant sugar uptake in Escherichia coli BL21(DE3) strains
    David Johannes Wurm, Johanna Hausjell, Sophia Ulonska · 2017 · Scientific Reports
  83. What do we mean by identifiability in mixed effects models?
    Marc Lavielle, Leon J Aarons · 2015 · Journal of Pharmacokinetics and Pharmacodynamics
  84. Higher-order Lie symmetries in identifiability and predictability analysis of dynamic models
    Benjamin Merkt, Jens Timmer, Daniel Kaschek · 2015 · Physical Review E
  85. Strong Inference in Mathematical Modeling: A Method for Robust Science in the Twenty-First Century
    Vitaly V. Ganusov · 2016 · Frontiers in Microbiology
  86. Parameter Identifiability of Fundamental Pharmacodynamic Models
    Janzén, David L. I., Bergenholm, Linnéa, Jirstrand, Mats, Parkinson, Joanna, Yates, James, Evans, Neil D., Chappell, Michael J. · 2016 · Frontiers in Physiology
  87. Profile-Wise Analysis: A profile likelihood-based workflow for identifiability analysis, estimation, and prediction with mechanistic mathematical models
    Matthew J. Simpson, Oliver J. Maclaren · 2023 · PLoS Computational Biology
  88. The Evolution of Systems Biology and Systems Medicine: From Mechanistic Models to Uncertainty Quantification
    Lingxia Qiao, Ali Khalilimeybodi, Nathaniel J. Linden-Santangeli, Padmini Rangamani · 2025 · Annual Review of Biomedical Engineering
  89. Statistical inference for dynamical systems: A review
    Kevin A. McGoff, Sayan Mukherjee, Natesh S. Pillai · 2015 · Statistics Surveys
  90. Whole-Embryo Modeling of Early Segmentation in Drosophila Identifies Robust and Fragile Expression Domains
    Jonathan Bieler, Christian Pozzorini, Félix Naef · 2011 · Biophysical Journal
  91. Workflow to set up substantial target-oriented mechanistic process models in bioprocess engineering
    Paul Kröll, Alexandra Hofer, Ines Viktoria Stelzer, Christoph Herwig · 2017 · Process Biochemistry
  92. Bayesian Calibration, Validation and Uncertainty Quantification for Predictive Modelling of Tumour Growth: A Tutorial
    Joe Collis, Anthony J. Connor, Marcin Paczkowski, Pavitra Kannan, Joe Pitt‐Francis, Helen Mary Byrne, M.E. Hubbard · 2017 · Bulletin of Mathematical Biology
  93. Methodologies for Quantitative Systems Pharmacology (QSP) Models: Design and Estimation
    Ribba, B, Grimm, HP, Agoram, B, Davies, MR, Gadkar, K, Niederer, S, van Riel, N, Timmis, J, van der Graaf, PH · 2017 · CPT: Pharmacometrics & Systems Pharmacology
  94. Pyomo.DOE : An open‐source package for model‐based design of experiments in Python
    Jialu Wang, Alexander William Dowling · 2022 · AIChE Journal
  95. Fides: Reliable trust-region optimization for parameter estimation of ordinary differential equation models
    Fabian Fröhlich, Peter Karl Sorger · 2022 · PLoS Computational Biology
  96. Implementing measurement error models with mechanistic mathematical models in a likelihood-based framework for estimation, identifiability analysis and prediction in the life sciences
    Ryan J. Murphy, Oliver J. Maclaren, Matthew J. Simpson · 2024 · Journal of The Royal Society Interface
  97. Robust Likelihood-Based Approach for Automated Optimization and Uncertainty Analysis of Toxicokinetic-Toxicodynamic Models
    Tjalling Jager · 2020 · Integrated Environmental Assessment and Management
  98. New types of experimental data shape the use of enzyme kinetics for dynamic network modeling
    Katja Tummler, Timo Lubitz, Max Schelker, Edda Klipp · 2013 · FEBS Journal
  99. Simultaneous model discrimination and parameter estimation in dynamic models of cellular systems
    María Rodriguez-Fernández, Markus Rehberg, Andreas Kremling, Julio R. Banga · 2013 · BMC Systems Biology
  100. Delineating parameter unidentifiabilities in complex models
    Dhruva V. Raman, James Anderson, Antonis Papachristodoulou · 2017 · Physical review. E