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A draft human pangenome reference.

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The complete sequence of a human Y chromosome

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Pangenome graph construction from genome alignments with Minigraph-Cactus

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Repetitive DNA sequence detection and its role in the human genome

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A pangenome reference of 36 Chinese populations

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Complex genetic variation in nearly complete human genomes

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A Draft Human Pangenome ReferencePreprint

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De novo reconstruction of satellite repeat units from sequence dataPreprint

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RNAdegformer: accurate prediction of mRNA degradation at nucleotide resolution with deep learning

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Modeling Genome Data Using Bidirectional LSTM

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Pangenome Graph Construction from Genome Alignment with Minigraph-Cactus

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Probably Correct: Rescuing Repeats with Short and Long Reads

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Building a Chinese pan-genome of 486 individuals

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A draft UAE-based Arab pangenome reference

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Human pericentromeric tandemly repeated DNA is transcribed at the end of oocyte maturation and is associated with membraneless mitochondria-associated structures

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A global view of human centromere variation and evolution

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Human pangenome analysis of sequences missing from the reference genome reveals their widespread evolutionary, phenotypic, and functional roles

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Bacteriophage Genetic Edition Using LSTM

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A Draft Arab Pangenome ReferencePreprint

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Challenges in structural variant calling in low-complexity regions

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Microbial contaminants cataloged as novel human sequences in recent human pan-genomesPreprint

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Nucleic Transformer: Deep Learning on Nucleic Acids with Self-attention and ConvolutionsPreprint

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DeepGRP: engineering a software tool for predicting genomic repetitive elements using Recurrent Neural Networks with attention

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Overexpression of Pericentromeric HSAT2 DNA Increases Expression of EMT Markers in Human Epithelial Cancer Cell Lines

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Improving spliced alignment by modeling splice sites with deep learning

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Locality Sensitive Hashing-based Sequence Alignment Using Deep Bidirectional LSTM ModelsPreprint

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The diploid reference genome of a human embryonic stem cell linePreprint

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Transformer-based modeling to study repetitive sequences of the human genome

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Additional file 1 of DeepGRP: engineering a software tool for predicting genomic repetitive elements using Recurrent Neural Networks with attention

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Global repeat map algorithm (GRM) reveals differences in alpha satellite number of tandem and higher order repeats (HORs) in human, Neanderthal and chimpanzee genomes – novel tandem repeat database

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DeepGRP: engineering a software tool for predicting genomic repetitive elements using Recurrent Neural Networks with attention

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Identifying satellites in nucleic acid sequences

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Genome-wide characterization of centromeric satellites from multiple mammalian genomesPreprint

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