The DOI matches its Crossref record; 70 of the 71 references it cites were found in a registry or an index.
High aggregate burden of somatic mtDNA point mutations in aging and Alzheimer's disease brain
Abstract
The mitochondrial theory of aging proposes that mitochondrial DNA (mtDNA) accumulates mutations with age, and that these mutations contribute to physiological decline in aging and degenerative diseases. Although a great deal of indirect evidence supports this hypothesis, the aggregate burden of mtDNA mutations, particularly point mutations, has not been systematically quantified in aging or neurodegenerative disorders. Therefore, we directly assessed the aggregate burden of brain mtDNA point mutations in 17 subjects with Alzheimer's disease (AD), 10 elderly control subjects and 14 younger control subjects, using a PCR-cloning-sequencing strategy. We found that brain mtDNA from elderly subjects had a higher aggregate burden of mutations than brain mtDNA from younger subjects. The average aggregate mutational burden in elderly subjects was 2 x 10(-4) mutations/bp. The bulk of these mutations were individually rare point mutations, 60% of which changed an amino acid. Control experiments ensure that these results were not due to artifacts arising from PCR error, mistaken identification of nuclear pseudogenes or ex vivo oxidation. Cytochrome oxidase activity correlated negatively with increasing mutational burden. These findings significantly bolster the mitochondrial theory of aging.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Evidence indicates age-related mtDNA changes do in fact occur within the human brain.”
From Brain aging, Alzheimer's disease, and mitochondria (2011) · cites this paper as [110]
Citations
Cites
1 retracted
Davis, R. E., Miller, S., Herrnstadt, C., Ghosh, S. S., Fahy, E., Shinobu, L. A., Galasko, D., Thal, L. J., Beal, M. F., Howell, N., et al. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.9.4526 · Cited by 341
RetractedMolecular cloning: A laboratory manual
Deininger, P. L. (1990) · Analytical Biochemistry · doi:10.1016/0003-2697(90)90595-z · Cited by 84,684
Sequence and organization of the human mitochondrial genome
Anderson, S., Bankier, A. T., Barrell, B. G., de Bruijn, M. H. L., Coulson, A. R., Drouin, J., Eperon, I. C., Nierlich, D. P., Roe, B. A., Sanger, F., et al. (1981) · Nature · doi:10.1038/290457a0 · Cited by 9,740
Oxidants, antioxidants, and the degenerative diseases of aging.
Ames, B. N., Shigenaga, M. K., & Hagen, T. M. (1993) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.90.17.7915 · Cited by 5,958
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
Andrews, R. M., Kubacka, I., Chinnery, P. F., Lightowlers, R. N., Turnbull, D. M., & Howell, N. (1999) · Nature Genetics · doi:10.1038/13779 · Cited by 3,337
Oxidative damage and mitochondrial decay in aging.
Shigenaga, M. K., Hagen, T. M., & Ames, B. N. (1994) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.91.23.10771 · Cited by 2,055
8-Hydroxyguanine, an abundant form of oxidative DNA damage, causes G-T and A-C substitutions.
Cheng, K. C., Cahill, D. S., Kasai, H., Nishimura, S., & Loeb, L. A. (1992) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(18)48474-8 · Cited by 1,844
Oxidative damage to mitochondrial DNA is increased in Alzheimer’s disease
Mecocci, P., MacGarvey, U., & Beal, M. F. (1994) · Annals of Neurology · doi:10.1002/ana.410360510 · Cited by 1,037
Mitochondrial DNA mutations as an important contributor to ageing and degenerative diseases
Linnane, A., Ozawa, T., Marzuki, S., & Tanaka, M. (1989) · The Lancet · doi:10.1016/s0140-6736(89)92145-4 · Cited by 983
Mitochondrial DNA deletions in human brain: regional variability and increase with advanced age
Corral-Debrinski, M., Horton, T., Lott, M. T., Shoffner, J. M., Flint Beal, M., & Wallace, D. C. (1992) · Nature Genetics · doi:10.1038/ng1292-324 · Cited by 890
Michikawa, Y., Mazzucchelli, F., Bresolin, N., Scarlato, G., & Attardi, G. M. (1999) · Science · doi:10.1126/science.286.5440.774 · Cited by 724
Helbock, H. J., Beckman, K. B., Shigenaga, M. K., Walter, P. B., Woodall, A., Yeo, H. C. H., & Ames, B. N. (1998) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.95.1.288 · Cited by 688
A pattern of accumulation of a somatic deletion of mitochondrial DNA in aging human tissues.
Cortopassi, G. A., Shibata, D. K., Soong, N.-W., & Arnheim, N. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.16.7370 · Cited by 639
Brain cytochrome oxidase in Alzheimer's disease
Kish, S. J., Bergeron, C., Rajput, A., Dozic, S., Mastrogiacomo, F., Chang, L., Wilson, J. M., DiStefano, L. M., & Nobrega, J. N. (1992) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.1992.tb09439.x · Cited by 537
Cortical Cytochrome Oxidase Activity Is Reduced in Alzheimer's Disease
Mutisya, E. M., Bowling, A. C., & Beal, M. F. (1994) · Journal of Neurochemistry · doi:10.1046/j.1471-4159.1994.63062179.x · Cited by 531
Electron transport chain defects in Alzheimer's disease brain
Parker, W. D., Parks, J. K., Filley, C. M., & Kleinschmidt-DeMasters, B. K. (1994) · Neurology · doi:10.1212/wnl.44.6.1090 · Cited by 495
Mitochondrial DNA Variants Observed in Alzheimer Disease and Parkinson Disease Patients
Shoffner, J. M., Brown, M. D., Torroni, A., Lott, M. T., Cabell, M. F., Mirra, S. S., Beal, M. F., Yang, C.-C., Gearing, M., Salvo, R., et al. (1993) · Genomics · doi:10.1006/geno.1993.1299 · Cited by 450
Ono, T., Isobe, K., Nakada, K., & Hayashi, J.-I. (2001) · Nature Genetics · doi:10.1038/90116 · Cited by 420 · cited 1×
“However, another point of caution is that mitochondria with multiple distinct mutations may in fact be able to complement each other, protecting the cell from mitochondrial dysfunction (63).”
BackgroundMitochondria: a practical approach.
Darley-Usmar, V. M., RICKWOOD, D., & Wilson, M. T. (1987) · IRL Press eBooks · Cited by 411
Cooper, J. A. D., Mann, V. M., & Schapira, A. H. V. (1992) · Journal of the Neurological Sciences · doi:10.1016/0022-510x(92)90270-u · Cited by 335
Coller, H. A., Khrapko, K., Bodyak, N. D., Nekhaeva, E., Herrero-Jimenez, P., & Thilly, W. G. (2001) · Nature Genetics · doi:10.1038/88859 · Cited by 288
Cybrids in Alzheimer's disease: a cellular model of the disease?
Swerdlow, R. H., Parks, J. K., Cassarino, D. S., Maguire, D. J., Maguire, R. S., Bennett, J. P., Davis, R. E., & Parker, W. D. (1997) · Neurology · doi:10.1212/wnl.49.4.918 · Cited by 272
Age‐Dependent Impairment of Mitochondrial Function in Primate Brain
Bowling, A. C., Mutisya, E. M., Walker, L. C., Price, D. L., Cork, L. C., & Beal, M. H. (1993) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.1993.tb13430.x · Cited by 263
Cybrids in Alzheimer's disease: A cellular model of the disease?
Swerdlow, R. H., & Parker, D. W. (1998) · Neurology · doi:10.1212/wnl.51.1.326-a · Cited by 260
Lee, H., Pang, C., Hsu, H., & Wei, Y. (1994) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/0925-4439(94)90056-6 · Cited by 255
Villani, G., Greco, M., Papa, S., & Attardi, G. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.48.31829 · Cited by 225
Jones, J. B., Song, J. J., Hempen, P. M., Parmigiani, G., Hruban, R. H., & Kern, S. E. (2001) · PubMed · Cited by 219
Wallace, D. C., Stugard, C., Murdock, D. G., Schurr, T. G., & Brown, M. D. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.26.14900 · Cited by 219
Deleterious mitochondrial DNA mutations accumulate in aging human tissues
Arnheim, N., & Cortopassi, G. A. (1992) · Mutation Research/DNAging · doi:10.1016/0921-8734(92)90020-p · Cited by 217
Hamilton, M. L. (2001) · Nucleic Acids Research · doi:10.1093/nar/29.10.2117 · Cited by 206
Aust, A. E., & Eveleigh, J. F. (1999) · Proceedings of the Society for Experimental Biology and Medicine · doi:10.1046/j.1525-1373.1999.d01-141.x · Cited by 191
Wang, L., Hirayasu, K., Ishizawa, M., & Kobayashi, Y. (1994) · Nucleic Acids Research · doi:10.1093/nar/22.9.1774 · Cited by 184
Meltzer, C. C., Zubieta, J.-K., Brandt, J., Tune, L. E., Mayberg, H., & Frost, J. J. (1996) · Neurology · doi:10.1212/wnl.47.2.454 · Cited by 182
Mitochondrial mutational spectra in human cells and tissues
Khrapko, K., Coller, H. A., André, P. C., Li-Sucholeiki, X., Hanekamp, J. S., & Thilly, W. G. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.25.13798 · Cited by 182
Bioenergetic consequences of accumulating the common 4977‐bp mitochondrial DNA deletion
Porteous, W. K., James, A. M., Sheard, P. W., Porteous, C. M., Packer, M. A., Hyslop, S. J., Melton, J. V., Pang, C., Wei, Y., & Murphy, M. P. (1998) · European Journal of Biochemistry · doi:10.1046/j.1432-1327.1998.2570192.x · Cited by 159
Nakae, D., Mizumoto, Y., Kobayashi, E., Noguchi, O., & Konishi, Y. (1995) · Cancer Letters · doi:10.1016/0304-3835(95)03980-b · Cited by 158
Human brain contains high levels of heteroplasmy in the noncoding regions of mitochondrial DNA.
JAZIN, E. E., Cavelier, L. B., Eriksson, I., Oreland, L., & Gyllensten, U. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.22.12382 · Cited by 144
Münscher, C., Rieger, T., Müller‐Höcker, J., & Kadenbach, B. (1993) · FEBS Letters · doi:10.1016/0014-5793(93)81484-h · Cited by 143
Lin, F. H., Lin, R. J., Wisniewski, H. M., Hwang, Y., Grundke, I., Healy-Louie, G., & Iqbal, K. (1992) · Biochemical and Biophysical Research Communications · doi:10.1016/s0006-291x(05)80136-6 · Cited by 137
Hirano, M., Shtilbans, A., Mayeux, R. P., Davidson, M. M., DiMauro, S., Knowles, J. A., & Schon, E. A. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.26.14894 · Cited by 133
Miller, S. W., Trimmer, P. A., Parker, W. D., & Davis, R. E. (1996) · Journal of Neurochemistry · doi:10.1046/j.1471-4159.1996.67051897.x · Cited by 127
High levels of mitochondrial DNA deletions in skeletal muscle of old rhesus monkeys
Schwarze, S. R., Lee, C. M., Chung, S. S., Roecker, E. B., Weindruch, R. H., & Aiken, J. M. (1995) · Mechanisms of Ageing and Development · doi:10.1016/0047-6374(95)01611-3 · Cited by 121
Cortopassi, G. A., & Wang, E. (1995) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/0925-4439(95)00025-y · Cited by 121
Phenol sensitization of DNA to subsequent oxidative damage in 8-hydroxyguanine assays
Claycamp, H. G. (1992) · Carcinogenesis · doi:10.1093/carcin/13.7.1289 · Cited by 113
Diseases caused by nuclear genes affecting mtDNA stability
Suomalainen, A., & Kaukonen, J. (2001) · American Journal of Medical Genetics · doi:10.1002/ajmg.1379 · Cited by 109
Mitochondrial DNA haplogroups and susceptibility to AD and dementia with Lewy bodies
Chinnery, P. F., Taylor, G. A., Howell, N., Andrews, R. M., Morris, C. M., Taylor, R. W., McKeith, I. G., Perry, R. H., Edwardson, J. A., & Turnbull, D. M. (2000) · Neurology · doi:10.1212/wnl.55.2.302 · Cited by 102
N6-Furfuryladenine, Kinetin, Protects against Fenton Reaction-Mediated Oxidative Damage to DNA
Olsen, A., Siboska, G. E., Clark, B. F. C., & Rattan, S. I. S. (1999) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1999.1669 · Cited by 100
Flux Control of Cytochrome c Oxidase in Human Skeletal Muscle
Kunz, W. S., Kudin, A. P., Vielhaber, S., Elger, C. E., Attardi, G. M., & Villani, G. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m004833200 · Cited by 96
Mitochondria. A practical approach
McCormack, J. (1988) · Biochemical Education · doi:10.1016/0307-4412(88)90107-0 · Cited by 95
Pallotti, F., Chen, X., Bonilla, E., & Schon, E. A. (1996) · PubMed Central · Cited by 93
Laderman, K., Penny, J. R., Mazzucchelli, F., Bresolin, N., Scarlato, G., & Attardi, G. M. (1996) · Journal of Biological Chemistry · doi:10.1074/jbc.271.27.15891 · Cited by 92
Association of the mitochondrial tRNAA4336G mutation with Alzheimer's and Parkinson's diseases
Egensperger, R., Kösel, S., Schnopp, N. M., Mehraein, P., & Graeber, M. B. (1997) · Neuropathology and Applied Neurobiology · doi:10.1111/j.1365-2990.1997.tb01301.x · Cited by 90
Point Mutations of the mtDNA Control Region in Normal and Neurodegenerative Human Brains
Chinnery, P. F., Taylor, G. A., Howell, N., Brown, D. T., Parsons, T. J., & Turnbull, D. M. (2001) · The American Journal of Human Genetics · doi:10.1086/318204 · Cited by 88
Ito, S., Ohta, S., Nishimaki, K., Kagawa, Y., Soma, R., Kuno, S., Komatsuzaki, Y., Mizusawa, H., & Hayashi, J. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.5.2099 · Cited by 80
Accumulation of Deletions and Point Mutations in Mitochondrial Genome in Degenerative Diseases
TANAKA, M., KOVALENKO, S. A., Gong, J., Borgeld, H. W., Katsumata, K., Hayakawa, M., Yoneda, M., & Ozawa, T. (1996) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.1996.tb39055.x · Cited by 69
Rapid, efficient method for multiplex amplification from filter paper
Caggana, M., Conroy, J. M., & Pass, K. A. (1998) · Human Mutation · doi:10.1002/(sici)1098-1004(1998)11:5 · Cited by 64
Isobe, K., Ito, S., Hosaka, H., Iwamura, Y., Kondo, H., Kagawa, Y., & Hayashi, J. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.8.4601 · Cited by 59
The Frequency of Point Mutations in Mitochondrial DNA Is Elevated in the Alzheimer's Brain
Chang, S.-W., Zhang, D., Chung, H. D., & Zassenhaus, H. P. (2000) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.2000.2885 · Cited by 58
Is a point mutation in the mitochondrial ND2 gene associated with alzheimer's disease?
Petruzzella, V., Chen, X., & Schon, E. A. (1992) · Biochemical and Biophysical Research Communications · doi:10.1016/s0006-291x(05)80834-4 · Cited by 53
Mitochondrial DNA Mutations in Alzheimer's Disease
Hutchin, T. P., Heath, P. R., Pearson, R. C. A., & Sinclair, A. J. (1997) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1997.7793 · Cited by 51
No association found between Alzheimer's disease and a mitochondrial tRNA glutamine gene variant
Wragg, M. A., Talbot, C. J., Morris, J. C., Lendon, C. L., & Goate, A. (1995) · Neuroscience Letters · doi:10.1016/0304-3940(95)12146-3 · Cited by 44
Kösel, S., Egensperger, R., Mehraein, P., & Graeber, M. B. (1994) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1994.2245 · Cited by 42
Kovalenko, S. A., Tanaka, M., Yoneda, M., Яковлев, А. Ф., & Ozawa, T. (1996) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1996.0722 · Cited by 39
Davis, J. N., & Parker, W. D. (1998) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1998.8353 · Cited by 35
Low Mutational Burden of Individual Acquired Mitochondrial DNA Mutations in Brain
Simon, D. K., Lin, M. T. S., Ahn, C., Liu, G.-J., Gibson, G. E., Beal, M. F., & Johns, D. R. (2001) · Genomics · doi:10.1006/geno.2001.6515 · Cited by 34
Draghia, R., Letourneur, F., Drugan, C., Manicom, J., Blanchot, C., Kahn, A., Poënaru, L., & Caillaud, C. (1997) · Human Mutation · doi:10.1002/(sici)1098-1004(1997)9:3 · Cited by 30
mtDNA Polymorphisms in Japanese Sporadic Alzheimer’s Disease
Tanno, Y., Okuizumi, K., & Tsuji, S. (1998) · Neurobiology of Aging · doi:10.1016/s0197-4580(98)00028-1 · Cited by 30
No mitochondrial haplotype was found to increase risk for alzheimer’s disease
Zsurka, G., Kalman, J. L., Juhász, A., Császár, A., Raskó, I., Janka, Z., & Venetianer, P. (1998) · Biological Psychiatry · doi:10.1016/s0006-3223(97)00461-7 · Cited by 28
Tysoe, C. J., Robinson, D., Brayne, C., Dening, T., Paykel, E. S., Huppert, F. A., & Rubinsztein, D. C. (1996) · Journal of Medical Genetics · doi:10.1136/jmg.33.12.1002 · Cited by 26
Lin, F. H., & Lin, R. J. (1992) · Biochemical and Biophysical Research Communications · doi:10.1016/0006-291x(92)92332-r · Cited by 15
Flagged first, then by citations
1 of the 71 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Mitochondrial Dysfunction and Oxidative Stress in Neurodegenerative Diseases
Lin, M. T., & Beal, M. F. (2006) · Nature · doi:10.1038/nature05292 · Cited by 6,455
Self-citationOxidative stress and mitochondrial dysfunction in Alzheimer’s disease
Wang, X., Wang, W., Li, L., Perry, G., Lee, H.-G., & Zhu, X. (2014) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2013.10.015 · Cited by 1,357
Mitochondria dysfunction in the pathogenesis of Alzheimer’s disease: Recent advances.
Wang, W., Zhao, F., Ma, X., Perry, G., & Zhu, X. (2020) · Molecular Neurodegeneration · doi:10.1186/s13024-020-00376-6 · Cited by 1,274
Detection of ultra-rare mutations by next-generation sequencing
Schmitt, M. W., Kennedy, S. R., Salk, J. J., Fox, E. J., Hiatt, J. B., & Loeb, L. A. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1208715109 · Cited by 1,047
Reddy, P. H., & Beal, M. F. (2008) · Trends in Molecular Medicine · doi:10.1016/j.molmed.2007.12.002 · Cited by 975
Metadata
- Authors
- Lin, M. T.
- Affiliations
- Cornell University (US)
- Corresponding author
- Lin, M. T.
- Venue
- Human Molecular Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 2002-01-01
- Volume
- 11
- Issue
- 2
- Pages
- 133-145
- ISSN
- 0964-6906 (ISSN-L)
- 1460-2083
- OpenAlex
- W2148641357
- Cited by
- 366
- References
- 71
- Citations by year
- 2026: 3 · 2025: 4 · 2024: 12 · 2023: 12 · 2022: 17 · 2021: 19 · 2020: 15 · 2019: 13 · 2018: 21 · 2017: 8 · 2016: 20 · 2015: 15 · 2014: 11 · 2013: 13 · 2012: 20
- FWCI
- 6.60
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Human Molecular Genetics (publishedVersion)
- PubMed (publishedVersion)
- Funders
- National Institutes of Health (5k08ns001971-03, 5k08ag000798-03)
- National Institute on Aging (K08-AG00798)
- National Institute of Neurological Disorders and Stroke (K08 NS01971)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Aging › Genetics, Aging, and Longevity in Model Organisms
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Alzheimer's disease research and treatments
- Keywords
- mitochondrial DNA, somatic mtDNA mutations, point mutations, aging, Alzheimer's disease, mitochondrial theory of aging, brain, cytochrome oxidase activity, neurodegeneration
- MeSH terms
- Adult, Aged, Aged, 80 and over, Aging, Alzheimer Disease, Brain, Child, Cloning, Molecular, Electron Transport Complex IV, DNA, Mitochondrial, Female, Humans, Infant, Male, Middle Aged, Molecular Sequence Data, Pseudogenes, Polymerase Chain Reaction, Point Mutation, Sequence Analysis, DNA
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review