Synapse proteomics of multiprotein complexes: en route from genes to nervous system diseases

PDZ domain proteins of synapses

Kim, E., & Sheng, M. (2004) · Nature reviews. Neuroscience · doi:10.1038/nrn1517 · Cited by 1,565 · see citing works

Proteomic analysis of NMDA receptor–adhesion protein signaling complexes

Husi, H., Ward, M. A., Choudhary, J. S., Blackstock, W. P., & Grant, S. G. N. (2000) · Nature Neuroscience · doi:10.1038/76615 · Cited by 1,194 · see citing works

Enhanced long-term potentiation and impaired learning in mice with mutant postsynaptic density-95 protein.

Migaud, M., Charlesworth, P., Dempster, M., Webster, L. C., Watabe, A. M., Makhinson, M., He, Y., Ramsay, M. F., Morris, R. G. M., Morrison, J. H., et al. (1998) · Nature · doi:10.1038/24790 · Cited by 1,160 · see citing works

Reduced hippocampal LTP and spatial learning in mice lacking NMDA receptor ε1 subunit

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Importance of the Intracellular Domain of NR2 Subunits for NMDA Receptor Function In Vivo

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Molecular characterization and comparison of the components and multiprotein complexes in the postsynaptic proteome

Collins, M., Husi, H., Yu, L., Brandon, J. M., Anderson, C. N. G., Blackstock, W., Choudhary, J., & Grant, S. (2006) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2005.03507.x · Cited by 448 · see citing works

Structure and Function of Glutamate Receptor Ion Channels

Mayer, M. L., & Armstrong, N. (2004) · Annual Review of Physiology · doi:10.1146/annurev.physiol.66.050802.084104 · Cited by 415 · see citing works

SynGAP regulates ERK/MAPK signaling, synaptic plasticity, and learning in the complex with postsynaptic density 95 and NMDA receptor

Komiyama, N. H., Watabe, A. M., Carlisle, H. J., Porter, K., Charlesworth, P., Monti, J., Strathdee, D. J. C., O'Carroll, C. M., Martin, S. J., Morris, R. G. M., et al. (2002) · The Journal of Neuroscience · doi:10.1523/jneurosci.22-22-09721.2002 · Cited by 382 · see citing works

Proteomics in postgenomic neuroscience: the end of the beginning

Choudhary, J. S., & Grant, S. G. N. (2004) · Nature Neuroscience · doi:10.1038/nn1240 · Cited by 139 · see citing works

Proteomics of the nervous system

Husi, H., & Grant, S. G. N. (2001) · Trends in Neurosciences · doi:10.1016/s0166-2236(00)01792-6 · Cited by 134 · see citing works

Neuropathic Sensitization of Behavioral Reflexes and Spinal NMDA Receptor/CaM Kinase II Interactions Are Disrupted in PSD-95 Mutant Mice

Garry, E. M., Moss, A., Delaney, A., O’Neill, F., Blakemore, J., Bowen, J., Husi, H., Mitchell, R., Grant, S. G. N., & Fleetwood-Walker, S. M. (2003) · Current Biology · doi:10.1016/s0960-9822(03)00084-8 · Cited by 125 · see citing works

Text Mining for Metabolic Pathways, Signaling Cascades, and Protein Networks

Hoffmann, R., Krallinger, M., Andres, E., Tamames, J., Blaschke, C., & Valencia, A. (2005) · Science's STKE · doi:10.1126/stke.2832005pe21 · Cited by 88 · see citing works

Proteomic analysis of native metabotropic glutamate receptor 5 protein complexes reveals novel molecular constituents

Farr, C. D., Gafken, P. R., Norbeck, A. D., Doneanu, C. E., Stapels, M. D., Barofsky, D. F., Minami, M., & Saugstad, J. A. (2004) · Journal of Neurochemistry · doi:10.1111/j.1471-4159.2004.02735.x · Cited by 82 · see citing works

Differential expression of two NMDA receptor interacting proteins, PSD‐95 and SynGAP during mouse development

Porter, K., Komiyama, N. H., Vitalis, T., Kind, P. C., & Grant, S. G. N. (2005) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2005.03874.x · Cited by 51 · see citing works

Progress in Realizing the Promise of Microarrays in Systems Neurobiology

Dougherty, J. D., & Geschwind, D. H. (2005) · Neuron · doi:10.1016/j.neuron.2005.01.007 · Cited by 20 · see citing works

The Organization and Integrative Function of the Post-Synaptic Proteome

Grant, S. G. N., Husi, H., Choudhary, J. S., Cumiskey, M. A., Blackstock, W. P., & Armstrong, J. D. (2003) · Springer eBooks · doi:10.1007/978-1-4615-0039-1_2 · Cited by 4 · see citing works

De novo CNV analysis implicates specific abnormalities of postsynaptic signalling complexes in the pathogenesis of schizophrenia

Kirov, G., Pocklington, A. J., Holmans, P., Ivanov, D., Ikeda, M., Ruderfer, D., Moran, J., Chambert, K., Toncheva, D., Georgieva, L., et al. (2012) · Molecular Psychiatry · doi:10.1038/mp.2011.154 · Cited by 844 · see citing works

The Expanding Social Network of Ionotropic Glutamate Receptors: TARPs and Other Transmembrane Auxiliary Subunits

Jackson, A. C., & Nicoll, R. A. (2011) · Neuron · doi:10.1016/j.neuron.2011.04.007 · Cited by 410 · see citing works

The origin and evolution of synapses

Ryan, T. J., & Grant, S. G. N. (2009) · Nature reviews. Neuroscience · doi:10.1038/nrn2717 · Cited by 527 · see citing works

The synapse in traumatic brain injury

Jamjoom, A. A. B., Rhodes, J. K. J., Andrews, P., & Grant, S. G. N. (2020) · Brain · doi:10.1093/brain/awaa321 · Cited by 243 · see citing works

Genomic insights into the overlap between psychiatric disorders: implications for research and clinical practice

Doherty, J. L., & Owen, M. J. (2014) · Genome Medicine · doi:10.1186/gm546 · Cited by 228 · see citing works

Generalist genes: implications for the cognitive sciences

Kovas, Y. V., & Plomin, R. J. (2006) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2006.03.001 · Cited by 221 · see citing works

Evolutionary expansion and anatomical specialization of synapse proteome complexity

Emes, R. D., Pocklington, A., Anderson, C. N. G., Bayés, À., Collins, M., Vickers, C., Croning, M., Malik, B., Choudhary, J., Armstrong, J., et al. (2008) · Nature Neuroscience · doi:10.1038/nn.2135 · Cited by 202 · see citing works

Neuroproteomics: understanding the molecular organization and complexity of the brain

Bayés, À., & Grant, S. G. N. (2009) · Nature reviews. Neuroscience · doi:10.1038/nrn2701 · Cited by 188 · see citing works

Opposing effects of PSD‐93 and PSD‐95 on long‐term potentiation and spike timing‐dependent plasticity

Carlisle, H. J., Fink, A. E., Grant, S. G. N., & O’Dell, T. J. (2008) · The Journal of Physiology · doi:10.1113/jphysiol.2008.163469 · Cited by 172 · see citing works

PSD95 nanoclusters are postsynaptic building blocks in hippocampus circuits

Broadhead, M. J., Horrocks, M. H., Zhu, F., Mureşan, L., Benavides‐Piccione, R., DeFelipe, J., Fricker, D. G., Kopanitsa, M. V., Duncan, R. R., Klenerman, D., et al. (2016) · Scientific Reports · doi:10.1038/srep24626 · Cited by 173 · see citing works

Synapse-Associated Protein 102/dlgh3 Couples the NMDA Receptor to Specific Plasticity Pathways and Learning Strategies

Cuthbert, P. C., Stanford, L. E., Coba, M. P., Ainge, J. A., Fink, A. E., Opazo, P., Delgado, J. Y., Komiyama, N. H., O’Dell, T. J., & Grant, S. G. N. (2007) · Journal of Neuroscience · doi:10.1523/jneurosci.4457-06.2007 · Cited by 157 · see citing works

Confirmed rare copy number variants implicate novel genes in schizophrenia

Tam, G. W. C., van de Lagemaat, L. N., Redon, R., Strathdee, K. E., Croning, M. D. R., Malloy, M. P., Muir, W. J., Pickard, B. S., Deary, I. J., Blackwood, D. H. R., et al. (2010) · Biochemical Society Transactions · doi:10.1042/bst0380445 · Cited by 139 · see citing works

The proteomes of neurotransmitter receptor complexes form modular networks with distributed functionality underlying plasticity and behaviour

Pocklington, A. J., Cumiskey, M. A., Armstrong, J. D., & Grant, S. G. N. (2006) · Molecular Systems Biology · doi:10.1038/msb4100041 · Cited by 130 · see citing works

The Role of Neuronal Complexes in Human X-Linked Brain Diseases

Laumonnier, F., Cuthbert, P. C., & Grant, S. G. N. (2007) · The American Journal of Human Genetics · doi:10.1086/511441 · Cited by 121 · see citing works

Reduced expression of the NMDA receptor-interacting protein SynGAP causes behavioral abnormalities that model symptoms of Schizophrenia

Guo, X., Hamilton, P. J., Reish, N. J., Sweatt, J. D., Miller, C. A., & Rumbaugh, G. (2009) · Neuropsychopharmacology · doi:10.1038/npp.2008.223 · Cited by 120 · see citing works

Evolution of complexity in the zebrafish synapse proteome

Bayés, À., Collins, M. O., Reig‐Viader, R., Gou, G., Goulding, D., Izquierdo, A., Choudhary, J. S., Emes, R. D., & Grant, S. G. N. (2017) · Nature Communications · doi:10.1038/ncomms14613 · Cited by 115 · see citing works

Zebrafish models for the functional genomics of neurogenetic disorders

Kabashi, E., Brustein, E., Champagne, N., & Drapeau, P. (2010) · Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease · doi:10.1016/j.bbadis.2010.09.011 · Cited by 117 · see citing works

A Population Genetic Approach to Mapping Neurological Disorder Genes Using Deep Resequencing

Myers, R. A., Casals, F., Gauthier, J., Hamdan, F. F., Keebler, J., Boyko, A. R., Bustamante, C. D., Piton, A. M., Spiegelman, D., Henrion, E., et al. (2011) · PLoS Genetics · doi:10.1371/journal.pgen.1001318 · Cited by 97 · see citing works

Arc Requires PSD95 for Assembly into Postsynaptic Complexes Involved with Neural Dysfunction and Intelligence

Fernández, E., Collins, M. O., Frank, R., Zhu, F., Kopanitsa, M. V., Nithianantharajah, J., Lemprière, S. A., Fricker, D. G., Elsegood, K. A., McLaughlin, C. L., et al. (2017) · Cell Reports · doi:10.1016/j.celrep.2017.09.045 · Cited by 88 · see citing works

Genes, plasticity and mental retardation

Vaillend, C., Poirier, R., & Laroche, S. (2008) · Behavioural Brain Research · doi:10.1016/j.bbr.2008.01.009 · Cited by 91 · see citing works

Synapse microarray identification of small molecules that enhance synaptogenesis

Shi, P., Skylar‐Scott, M. A., Ghosh, B., Wan, D., Wissner-Gross, Z. D., Mazitschek, R., Haggarty, S. J., & Yanik, M. F. (2011) · Nature Communications · doi:10.1038/ncomms1518 · Cited by 90 · see citing works

Candidate genes involved in neural plasticity and the risk for attention-deficit hyperactivity disorder: a meta-analysis of 8 common variants

Forero, D. A., Arboleda, G., Vásquez, R., & Arboleda, H. (2009) · Journal of Psychiatry and Neuroscience · doi:10.1139/jpn.0947 · Cited by 89 · see citing works

G2Cdb: the Genes to Cognition database

Croning, M. D. R., Marshall, M. C., McLaren, P., Armstrong, J. D., & Grant, S. G. N. (2008) · Nucleic Acids Research · doi:10.1093/nar/gkn700 · Cited by 75 · see citing works

mGluR5 Regulates Glutamate-Dependent Development of the Mouse Somatosensory Cortex

Wijetunge, L. S., Till, S. M., Gillingwater, T. H., Ingham, C. A., & Kind, P. C. (2008) · Journal of Neuroscience · doi:10.1523/jneurosci.2600-08.2008 · Cited by 74 · see citing works

Generalist Genes: Genetic Links Between Brain, Mind, and Education

Plomin, R. J., Kovas, Y. V., & Haworth, C. M. A. (2007) · Mind Brain and Education · doi:10.1111/j.1751-228x.2007.00002.x · Cited by 74 · see citing works

Proteomic and bioinformatic analysis of epithelial tight junction reveals an unexpected cluster of synaptic molecules

Tang, V. (2006) · Biology Direct · doi:10.1186/1745-6150-1-37 · Cited by 66 · see citing works

Stress-induced Changes in the S-palmitoylation and S-nitrosylation of Synaptic Proteins*[S]

Zaręba-Kozioł, M., Bartkowiak-Kaczmarek, A., Figiel, I., Krzystyniak, A., Wójtowicz, T., Bijata, M., & Włodarczyk, J. (2019) · Molecular & Cellular Proteomics · doi:10.1074/mcp.ra119.001581 · Cited by 58 · see citing works

A genomic lifespan program that reorganises the young adult brain is targeted in schizophrenia

Skene, N., Roy, M. M., & Grant, S. G. N. (2017) · eLife · doi:10.7554/elife.17915 · Cited by 51 · see citing works

A novel role for PSD-95 in mediating ethanol intoxication, drinking and place preference

Camp, M., Feyder, M. J., Ihne, J. L., Palachick, B., Hurd, B., Karlsson, R., Noronha, B., Chen, Y.-C., Coba, M. P., Grant, S. G. N., et al. (2011) · Addiction Biology · doi:10.1111/j.1369-1600.2010.00282.x · Cited by 55 · see citing works

Dlgap1 knockout mice exhibit alterations of the postsynaptic density and selective reductions in sociability

Coba, M. P., Ramaker, M. J., Ho, E. V., Thompson, S. L., Komiyama, N. H., Grant, S. G. N., Knowles, J. A., & Dulawa, S. C. (2018) · Scientific Reports · doi:10.1038/s41598-018-20610-y · Cited by 48 · see citing works

The molecular evolution of the vertebrate behavioural repertoire

Grant, S. G. N. (2015) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2015.0051 · Cited by 46 · see citing works

Neuroproteomics – the tasks lying ahead

Becker, M., Schindler, J., & Nothwang, H. G. (2006) · Electrophoresis · doi:10.1002/elps.200500892 · Cited by 43 · see citing works

Altered expression of synaptic protein mRNAs in STOP (MAP6) mutant mice

Eastwood, S. L., Lyon, L., George, L., Andrieux, A., Job, D., & Harrison, P. J. (2006) · Journal of Psychopharmacology · doi:10.1177/0269881106068825 · Cited by 43 · see citing works

Kinase Networks Integrate Profiles of N-Methyl-d-aspartate Receptor-mediated Gene Expression in Hippocampus

Coba, M. P., Valor, L. M., Kopanitsa, M. V., Afinowi, N. O., & Grant, S. G. N. (2008) · Journal of Biological Chemistry · doi:10.1074/jbc.m804951200 · Cited by 43 · see citing works

A single-synapse resolution survey of PSD95-positive synapses in twenty human brain regions

Curran, O. E., Qiu, Z., Smith, C., & Grant, S. (2020) · European Journal of Neuroscience · doi:10.1111/ejn.14846 · Cited by 34 · see citing works

Perturbation of dendritic protrusions in intellectual disability

Levenga, J., & Willemsen, R. (2012) · Progress in brain research · doi:10.1016/b978-0-444-54299-1.00008-x · Cited by 37 · see citing works

The X Files: “The Mystery of X Chromosome Instability in Alzheimer’s Disease”

Bajić, V., Essack, M., Živković, L., Stewart, A. J., Zafirovic, S. S., Bajić, V. B., Gojobori, T., Isenović, E. R., & Spremo‐Potparević, B. (2020) · Frontiers in Genetics · doi:10.3389/fgene.2019.01368 · Cited by 33 · see citing works

Six degrees of separation: on the prior probability that schizophrenia susceptibility genes converge on synapses, glutamate and NMDA receptors

Harrison, P. J., & West, V. A. (2006) · Molecular Psychiatry · doi:10.1038/sj.mp.4001886 · Cited by 33 · see citing works

Supramolecular Signalling Complexes in the Nervous System

Collins, M. O., & Grant, S. G. N. (2007) · Springer eBooks · doi:10.1007/978-1-4020-5943-8_9 · Cited by 32 · see citing works

Modeling Intracellular Signaling Underlying Striatal Function in Health and Disease

Nair, A. G., Gutierrez‐Arenas, O., Eriksson, O., Jauhiainen, A., Blackwell, K. T., & Kotaleski, J. H. (2014) · Progress in molecular biology and translational science · doi:10.1016/b978-0-12-397897-4.00013-9 · Cited by 31 · see citing works

Understanding regeneration through proteomics

Franco, C. D. M. F., Soares, R. F., Pires, E., Kočí, K., de Almeida, A. M., Santos, R., & Coelho, A. V. (2012) · PROTEOMICS · doi:10.1002/pmic.201200397 · Cited by 30 · see citing works

Proteomic insights into synaptic signaling in the brain: the past, present and future

Xu, Y., Song, X., Wang, D., Wang, Y., Li, P., & Li, J. (2021) · Molecular Brain · doi:10.1186/s13041-021-00750-5 · Cited by 50 · see citing works

The SH3 domain of postsynaptic density 95 mediates inflammatory pain through phosphatidylinositol‐3‐kinase recruitment

Arbuckle, M. I., Komiyama, N. H., Delaney, A., Coba, M. P., Garry, E. M., Rosie, R., Allchorne, A. J., Forsyth, L. H., Bence, M., Carlisle, H. J., et al. (2010) · EMBO Reports · doi:10.1038/embor.2010.63 · Cited by 29 · see citing works

Patterns of sequence conservation in presynaptic neural genes

Hadley, D., Murphy, T., Valladares, O., Hannenhalli, S. S., Ungar, L., Kim, J., & Bućan, M. (2006) · Genome biology · doi:10.1186/gb-2006-7-11-r105 · Cited by 26 · see citing works

Experience‐dependent regulation of functional maps and synaptic protein expression in the cat visual cortex

Jaffer, S., Vorobyov, V., Kind, P. C., & Sengpiel, F. (2012) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2012.08044.x · Cited by 14 · see citing works

Integrating Synapse Proteomics with Transcriptional Regulation

Valor, L. M., & Grant, S. G. N. (2006) · Behavior Genetics · doi:10.1007/s10519-006-9114-3 · Cited by 13 · see citing works

A General Basis for Cognition in the Evolution of Synapse Signaling ComplexesPreprint

Grant, S. G. N. (2009) · Cold Spring Harbor Symposia on Quantitative Biology · doi:10.1101/sqb.2009.74.033 · Cited by 13 · see citing works

β-adrenergic receptor activation rescues theta frequency stimulation-induced LTP deficits in mice expressing C-terminally truncated NMDA receptor GluN2A subunitsPreprint

Moody, T. D., Watabe, A. M., Indersmitten, T., Komiyama, N. H., Grant, S. G. N., & O’Dell, T. J. (2011) · Learning & Memory · doi:10.1101/lm.2045311 · Cited by 12 · see citing works

Autisme, génétique et anomalies de la fonction synaptique

Perche, O., Laumonnier, F., Baala, L., Ardourel, M., Menuet, A., Robin, V., Mortaud, S., Montécot, C., Richard, O., Pichon, J., et al. (2010) · Pathologie Biologie · doi:10.1016/j.patbio.2009.12.005 · Cited by 10 · see citing works

Identification of a novel Dlg2 isoform differentially expressed in IFNβ-producing plasmacytoid dendritic cells

Ali, S., Hoven, A., Dress, R. J., Schaal, H., Alferink, J., & Scheu, S. (2018) · BMC Genomics · doi:10.1186/s12864-018-4573-5 · Cited by 10 · see citing works

Curing Blindness with Stem Cells: Hope, Reality, and Challenges

Adler, R. (2007) · Advances in experimental medicine and biology · doi:10.1007/978-0-387-74904-4_1 · Cited by 7 · see citing works

Genes and cognition

Pietropaolo, S., & Crusio, W. E. (2010) · Wiley Interdisciplinary Reviews Cognitive Science · doi:10.1002/wcs.135 · Cited by 7 · see citing works

Syndromes and epistemology II: Is autism a polygenic disorder?

Fisch, G. S. (2008) · American Journal of Medical Genetics Part A · doi:10.1002/ajmg.a.32438 · Cited by 6 · see citing works

Dosis génica y lenguaje: a propósito de la región cromosómica 7q11.23

Benítez‐Burraco, A. (2009) · Revista de Logopedia Foniatría y Audiología · doi:10.1016/s0214-4603(09)70143-3 · Cited by 4 · see citing works

Evolution of the Cognitive Proteome: From Static to Dynamic Network Models

Armstrong, J. D., & Sorokina, O. (2011) · Advances in experimental medicine and biology · doi:10.1007/978-1-4419-7210-1_6 · Cited by 1 · see citing works

Role of mGluR5 and FMRP in mouse primary somatosensory cortex

Wijetunge, L. S. (2009) · OpenGrey (Institut de l'Information Scientifique et Technique)

The Role of Neurotransmitter Receptors in Mental and Behavioral Disorders: a Biomedical Text Mining Approach

Musa, A. (2012) · Eastern Mediterranean University Institutional Repository (Eastern Mediterranean University)

New Approaches to Neurochemistry

Bergquist, J., Silberring, J., & Ekman, R. (2008) · Mass Spectrometry · doi:10.1002/9780470395813.ch17

Modeling receptor induced signaling in MSNs

Nair, A. G. (2014)

Chronic lithium treatment influences impulse control and cognition and regulates gene expression

Levesque, D. L. (2013) · cIRcle (University of British Columbia) · doi:10.14288/1.0103381

Proteomic Approaches for the Study of Electrical Synapses and Associated Protein-Interaction Complexes

Alev, C., Zoidl, G., & Dermietzel, R. (2012) · Neuromethods · doi:10.1007/978-1-62703-266-7_7

A8-A17 Cell Groups (Dopaminergic Cell Groups)

Binder, M. D., Hirokawa, N., & Windhorst, U. (2008) · Springer eBooks · doi:10.1007/978-3-540-29678-2_7

Genetics and Molecular Biology of Protein Expression, Localization and Function

McFarlane, S. (2008) · Springer eBooks · doi:10.1007/978-3-540-29678-2_1973

Impact of psychotomimetic molecules on glutamatergic N-Methyl-D-Aspartate receptors surface trafficking

Jézéquel, J. (2016) · theses.fr (ABES) · doi:10.70675/a7276087zc049z442fz8b5bzab9e03d034cb

The proteomes of neurotransmitter receptor complexes form modular networks with distributed functionality underlying plasticity and behaviour

Pocklington, A. J., Cumiskey, M. A., Armstrong, J. D., & Grant, S. G. N. (2006) · Molecular Systems Biology · doi:10.1038/msb4100041 · Cited by 130 · see citing works

Synapse Proteomes and Disease

Bayés, À., & Grant, S. G. N. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-800109-7.00006-6 · Cited by 2 · see citing works

The Role of Neuronal Complexes in Human X-Linked Brain Diseases

Laumonnier, F., Cuthbert, P. C., & Grant, S. G. N. (2007) · The American Journal of Human Genetics · doi:10.1086/511441 · Cited by 121 · see citing works

Organization of brain complexity--synapse proteome form and function

Pocklington, A. J. (2006) · Briefings in Functional Genomics and Proteomics · doi:10.1093/bfgp/ell013 · Cited by 36 · see citing works

Proteomic analysis of NMDA receptor–adhesion protein signaling complexes

Husi, H., Ward, M. A., Choudhary, J. S., Blackstock, W. P., & Grant, S. G. N. (2000) · Nature Neuroscience · doi:10.1038/76615 · Cited by 1,194 · see citing works