Dysregulation of chromatin remodelling complexes in amyotrophic lateral sclerosis
Open accessAbstract
Amyotrophic lateral sclerosis is a fatal neurodegenerative disease with paralysis resulting from dysfunction and loss of motor neurons. A common neuropathological finding is attrition of motor neuron dendrites, which make central connections vital to motor control. The chromatin remodelling complex, neuronal Brahma-related gene 1 (Brg1)-associated factor complex (nBAF), is critical for neuronal differentiation, dendritic extension and synaptic function. We have identified loss of the crucial nBAF subunits Brg1, Brg1-associated factor 53b and calcium responsive transactivator in cultured motor neurons expressing FUS or TAR-DNA Binding Protein 43 (TDP-43) mutants linked to familial ALS. When plasmids encoding wild-type or mutant human FUS or TDP-43 were expressed in motor neurons of dissociated spinal cord cultures prepared from E13 mice, mutant proteins in particular accumulated in the cytoplasm. Immunolabelling of nBAF subunits was reduced in proportion to loss of nuclear FUS or TDP-43 and depletion of Brg1 was associated with nuclear retention of Brg1 mRNA. Dendritic attrition (loss of intermediate and terminal dendritic branches) occurred in motor neurons expressing mutant, but not wild-type, FUS or TDP-43. This attrition was delayed by ectopic over-expression of Brg1 and was reproduced by inhibiting Brg1 activity either through genetic manipulation or treatment with the chemical inhibitor, (E)-1-(2-Hydroxyphenyl)-3-((1R, 4R)-5-(pyridin-2-yl)-2, 5-diazabicyclo[2.2.1]heptan-2-yl)prop-2-en-1-one, demonstrating the importance of Brg1 to maintenance of dendritic architecture. Loss of nBAF subunits was also documented in spinal motor neurons in autopsy tissue from familial amyotrophic sclerosis (chromosome 9 open reading frame 72 with G4C2 nucleotide expansion) and from sporadic cases with no identified mutation, pointing to dysfunction of nBAF chromatin remodelling in multiple forms of ALS.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In studies on ALS, loss of crucial BRG1 subunits was found to cause dendritic attrition, which was delayed by overexpressing BRG1.
“In studies on ALS for example, loss of crucial BRG1 subunits was found to cause dendritic attrition, which was delayed by overexpressing BRG1 [152].”
From DNA repair deficiency and senescence in concussed professional athletes involved in contact sports (2019) · cites this paper as [152]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Ubiquitinated TDP-43 in Frontotemporal Lobar Degeneration and Amyotrophic Lateral Sclerosis
Neumann, M., Sampathu, D. M., Kwong, L. K., Truax, A. C., Micsenyi, M. C., Chou, T. T., Bruce, J., Schuck, T., Grossman, M., Clark, C. M., et al. (2006) · Science · doi:10.1126/science.1134108 · Cited by 6,576 · see citing works
TDP-43 Mutations in Familial and Sporadic Amyotrophic Lateral Sclerosis
Sreedharan, J., Blair, I. P., Tripathi, V. B., Hu, X., Vance, C., Rogelj, B., Ackerley, S., Durnall, J. C., Williams, K. L., Buratti, E., et al. (2008) · Science · doi:10.1126/science.1154584 · Cited by 2,630 · see citing works
Mutations in FUS, an RNA Processing Protein, Cause Familial Amyotrophic Lateral Sclerosis Type 6
Vance, C. A., Rogelj, B., Hortobágyi, T., Vos, K. J. D., Nishimura, A. L., Sreedharan, J., Hu, X., Smith, B. N., Ruddy, D., Wright, P. D., et al. (2009) · Science · doi:10.1126/science.1165942 · Cited by 2,531 · see citing works
Mutations in the FUS/TLS Gene on Chromosome 16 Cause Familial Amyotrophic Lateral Sclerosis
Kwiatkowski, T. J., Bosco, D. A., LeClerc, A. L., Tamrazian, E., Vanderburg, C. R., Russ, C., Davis, A., Gilchrist, J. M., Kasarskis, E. J., Munsat, T. L., et al. (2009) · Science · doi:10.1126/science.1166066 · Cited by 2,526 · see citing works
Converging Mechanisms in ALS and FTD: Disrupted RNA and Protein Homeostasis
Ling, S.-C., Polymenidou, M., & Cleveland, D. W. (2013) · Neuron · doi:10.1016/j.neuron.2013.07.033 · Cited by 1,811 · see citing works
Patterns and rates of exonic de novo mutations in autism spectrum disorders
Neale, B. M., Kou, Y., Liu, L., Ma’ayan, A., Samocha, K. E., Sabo, A., Lin, C.-F., Stevens, C., Wang, L.-S., Makarov, V., et al. (2012) · Nature · doi:10.1038/nature11011 · Cited by 1,734 · see citing works
TARDBP mutations in individuals with sporadic and familial amyotrophic lateral sclerosis
Kabashi, E., Valdmanis, P. N., Dion, P., Spiegelman, D., McConkey, B. J., Velde, C. V., Bouchard, J.-P., Lacomblez, L., Pochigaeva, K., Salachas, F., et al. (2008) · Nature Genetics · doi:10.1038/ng.132 · Cited by 1,544 · see citing works
Neuronal Subtype-Specific Genes that Control Corticospinal Motor Neuron Development In Vivo
Arlotta, P., Molyneaux, B. J., Chen, J., Inoue, J., Kominami, R., & Macklis, J. D. (2005) · Neuron · doi:10.1016/j.neuron.2004.12.036 · Cited by 1,157 · see citing works
The C9orf72 repeat expansion disrupts nucleocytoplasmic transport.
Zhang, K., Donnelly, C. J., Haeusler, A. R., Grima, J. C., Machamer, J. B., Steinwald, P., Daley, E. L., Miller, S. J., Cunningham, K. M., Vidensky, S., et al. (2015) · Nature · doi:10.1038/nature14973 · Cited by 982 · see citing works
GGGGCC repeat expansion in C9orf72 compromises nucleocytoplasmic transport
Freibaum, B. D., Lu, Y., Lopez-Gonzalez, R., Kim, N. C., Almeida, S., Lee, K.-H., Badders, N., Valentine, M., Miller, B. L., Wong, P. C., et al. (2015) · Nature · doi:10.1038/nature14974 · Cited by 841 · see citing works
Khavari, P. A., Peterson, C. L., Tamkun, J. W., Mendel, D. B., & Crabtree, G. R. (1993) · Nature · doi:10.1038/366170a0 · Cited by 670 · see citing works
Jovičić, A., Mertens, J., Boeynaems, S., Bogaert, E., Chai, N., Yamada, S. B., Paul, J. W., Sun, S., Herdy, J. R., Bieri, G., et al. (2015) · Nature Neuroscience · doi:10.1038/nn.4085 · Cited by 598 · see citing works
MicroRNA-mediated switching of chromatin-remodelling complexes in neural development
Yoo, A. S., Staahl, B. T., Chen, L., & Crabtree, G. R. (2009) · Nature · doi:10.1038/nature08139 · Cited by 537 · see citing works
Mutations affecting components of the SWI/SNF complex cause Coffin-Siris syndrome
Tsurusaki, Y., Okamoto, N., Ohashi, H., Kosho, T., Imai, Y., Hibi‐Ko, Y., Kaname, T., Naritomi, K., Kawame, H., Wakui, K., et al. (2012) · Nature Genetics · doi:10.1038/ng.2219 · Cited by 518 · see citing works
Novel Mutations in TARDBP (TDP-43) in Patients with Familial Amyotrophic Lateral Sclerosis
Rutherford, N. J., Zhang, Y., Baker, M. C., Gass, J. M., Finch, N. A., Xu, Y., Stewart, H. G., Kelley, B. J., Kuntz, K., Crook, R., et al. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.1000193 · Cited by 450 · see citing works
Gain and loss of function of ALS-related mutations of TARDBP (TDP-43) cause motor deficits in vivo
Kabashi, E., Lin, L., Tradewell, M. L., Dion, P. A., Bercier, V., Bourgouin, P., Rochefort, D. L., Hadj, S. B., Durham, H. D., Velde, C. V., et al. (2009) · Human Molecular Genetics · doi:10.1093/hmg/ddp534 · Cited by 416 · see citing works
Self-citationCytoplasmic protein aggregates interfere with nucleocytoplasmic transport of protein and RNA
Woerner, A. C., Frottin, F., Hornburg, D., Feng, L., Meissner, F., Patra, M., Tatzelt, J., Mann, M., Winklhofer, K. F., Hartl, F. U., et al. (2015) · Science · doi:10.1126/science.aad2033 · Cited by 386 · see citing works
Regulation of Dendritic Development by Neuron-Specific Chromatin Remodeling Complexes
Wu, J. I., Lessard, J. A., Olave, I. A., Qiu, Z., Ghosh, A., Graef, I. A., & Crabtree, G. R. (2007) · Neuron · doi:10.1016/j.neuron.2007.08.021 · Cited by 384 · see citing works
Deng, H., Zhai, H., Bigio, E. H., Yan, J., Fecto, F., Ajroud, K., Mishra, M., Ajroud‐Driss, S., Heller, S., Sufit, R. L., et al. (2010) · Annals of Neurology · doi:10.1002/ana.22051 · Cited by 353 · see citing works
RNA targets of wild-type and mutant FET family proteins
Hoell, J. I., Larsson, E., Runge, S., Nusbaum, J. D., Duggimpudi, S., Farazi, T. A., Hafner, M., Borkhardt, A., Sander, C., & Tuschl, T. (2011) · Nature Structural & Molecular Biology · doi:10.1038/nsmb.2163 · Cited by 350 · see citing works
Arginine methylation next to the PY‐NLS modulates Transportin binding and nuclear import of FUS
Dormann, D., Madl, T., Valori, C. F., Bentmann, E., Tahirovic, S., Abou‐Ajram, C., Kremmer, E., Ansorge, O., Mackenzie, I. R. A., Neumann, M., et al. (2012) · The EMBO Journal · doi:10.1038/emboj.2012.261 · Cited by 326 · see citing works
Fujii, R., Okabe, S., Urushido, T., Inoue, K., Yoshimura, A., Tachibana, T., Nishikawa, T., Hicks, G. G., & Takumi, T. (2005) · Current Biology · doi:10.1016/j.cub.2005.01.058 · Cited by 322 · see citing works
Tiveron, M.-C., Hirsch, M., & Brunet, J. (1996) · Journal of Neuroscience · doi:10.1523/jneurosci.16-23-07649.1996 · Cited by 295 · see citing works
Dendrite Development Regulated by CREST, a Calcium-Regulated Transcriptional Activator
Aizawa, H., Hu, S., Bobb, K., Balakrishnan, K., Ince-Dunn, G., Gurevich, I., Cowan, M., & Ghosh, A. (2004) · Science · doi:10.1126/science.1089845 · Cited by 282 · see citing works
Vangamudi, B., Paul, T. A., Shah, P. K., Kost-Alimova, M., Nottebaum, L., Shi, X., Zhan, Y., Leo, E., Mahadeshwar, H. S., Protopopov, A., et al. (2015) · Cancer Research · doi:10.1158/0008-5472.can-14-3798 · Cited by 281 · see citing works
Roy, J., Minotti, S., Dong, L., Figlewicz, D. A., & Durham, H. D. (1998) · Journal of Neuroscience · doi:10.1523/jneurosci.18-23-09673.1998 · Cited by 231 · see citing works
Self-citationTradewell, M. L., Yu, Z., Tibshirani, M., Boulanger, M., Durham, H. D., & Richard, S. (2011) · Human Molecular Genetics · doi:10.1093/hmg/ddr448 · Cited by 213 · see citing works
Self-citationNuclear transport impairment of amyotrophic lateral sclerosis‐linked mutations in FUS/TLS
Ito, D., Seki, M., Tsunoda, Y., Uchiyama, H., & Suzuki, N. (2010) · Annals of Neurology · doi:10.1002/ana.22246 · Cited by 168 · see citing works
Exome sequencing to identify de novo mutations in sporadic ALS trios
Chesi, A., Staahl, B. T., Jovičić, A., Couthouis, J., Fasolino, M., Raphael, A. R., Yamazaki, T., Elias, L., Polak, M. A., Kelly, C. M., et al. (2013) · Nature Neuroscience · doi:10.1038/nn.3412 · Cited by 150 · see citing works
Activity-dependent FUS dysregulation disrupts synaptic homeostasis
Sephton, C. F., Tang, A. A., Kulkarni, A., West, J. D., Brooks, M., Stubblefield, J. J., Liu, Y., Zhang, M. Q., Green, C. B., Huber, K. M., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1406162111 · Cited by 145 · see citing works
Halgren, C., Kjaergaard, S., Bak, M., Hansen, C. S., El-Schich, Z., Anderson, C., Henriksen, K. F., Hjalgrim, H., Kirchhoff, M., Bijlsma, E. K., et al. (2011) · Clinical Genetics · doi:10.1111/j.1399-0004.2011.01755.x · Cited by 144 · see citing works
Xiao, S., MacNair, L., McGoldrick, P., McKeever, P. M., McLean, J. R., Zhang, M., Keith, J. L., Zinman, L. H., Rogaeva, E. A., & Robertson, J. (2015) · Annals of Neurology · doi:10.1002/ana.24469 · Cited by 139 · see citing works
Self-citationLanghammer, C. G., Previtera, M. L., Sweet, E. S., Sran, S. S., Chen, M., & Firestein, B. L. (2010) · Cytometry Part A · doi:10.1002/cyto.a.20954 · Cited by 135 · see citing works
Keller, B. A., Volkening, K., Droppelmann, C. A., Ang, L. C., Rademakers, R., & Strong, M. J. (2012) · Acta Neuropathologica · doi:10.1007/s00401-012-1035-z · Cited by 130 · see citing works
Lu, Y., Ferris, J., & Gao, F. (2009) · Molecular Brain · doi:10.1186/1756-6606-2-30 · Cited by 126 · see citing works
A Calcium-Dependent Switch in a CREST-BRG1 Complex Regulates Activity-Dependent Gene Expression
Qiu, Z., & Ghosh, A. (2008) · Neuron · doi:10.1016/j.neuron.2008.09.040 · Cited by 125 · see citing works
Rossi, S., Serrano, A., Gerbino, V., Giorgi, A., Francesco, L. D., Nencini, M., Bozzo, F., Schininà, M. E., Bagni, C., Cestra, G., et al. (2015) · Journal of Cell Science · doi:10.1242/jcs.165332 · Cited by 113 · see citing works
Clark, J. A., Southam, K. A., Blizzard, C. A., King, A. E., & Dickson, T. C. (2016) · Journal of Chemical Neuroanatomy · doi:10.1016/j.jchemneu.2016.03.003 · Cited by 111 · see citing works
Antagonistic Roles for BRM and BRG1 SWI/SNF Complexes in Differentiation
Flowers, S. J., Nagl, N. G., Beck, G. R., & Morán, E. (2009) · Journal of Biological Chemistry · doi:10.1074/jbc.m808782200 · Cited by 105 · see citing works
Ciernia, A. V., & Wood, M. A. (2013) · Neuropharmacology · doi:10.1016/j.neuropharm.2013.10.002 · Cited by 105 · see citing works
ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects.
Qiu, H.-Y., Lee, S., Shang, Y., Wang, W.-Y., Au, K., Kamiya, S., Barmada, S. J., Finkbeiner, S., Lui, H., Carlton, C. E., et al. (2014) · Journal of Clinical Investigation · doi:10.1172/jci72723 · Cited by 73 · see citing works
Tibshirani, M., Tradewell, M. L., Mattina, K. R., Minotti, S., Yang, W., Zhou, H., Strong, M. J., Hayward, L. J., & Durham, H. D. (2014) · Human Molecular Genetics · doi:10.1093/hmg/ddu494 · Cited by 63 · see citing works
Self-citationAutomated Sholl Analysis of Digitized Neuronal Morphology at Multiple Scales
Kutzing, M. K., Langhammer, C. G., Luo, V. M., et al. (2010) · Journal of Visualized Experiments · doi:10.3791/2354 · Cited by 62 · see citing works
Creating a neural specific chromatin landscape by npBAF and nBAF complexes
Staahl, B. T., & Crabtree, G. R. (2013) · Current Opinion in Neurobiology · doi:10.1016/j.conb.2013.09.003 · Cited by 52 · see citing works
Nakano, I., & Hirano, A. (1987) · Journal of Neuropathology & Experimental Neurology · doi:10.1097/00005072-198701000-00004 · Cited by 43 · see citing works
A hypothesis for the pathogenesis of amyotrophic lateral sclerosis.
Karpati, G., Carpenter, S., & Durham, H. D. (1988) · PubMed · Cited by 26 · see citing works
Self-citationTakeda, T., Uchihara, T., Nakayama, Y., et al. (2014) · Acta Neuropathologica Communications · doi:10.1186/2051-5960-2-11 · Cited by 17 · see citing works
Retrovirus induced motor neuron degeneration.
Hoffman, P. M., Om, P., Bilello, J. A., et al. (1988) · PubMed · Cited by 15 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Burg, T., Rossaert, E., Moisse, M., Van Damme, P., & Van Den Bosch, L. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms222011224 · Cited by 50 · see citing works
DNA repair deficiency and senescence in concussed professional athletes involved in contact sports
Schwab, N., Grenier, K., & Hazrati, L.-N. (2019) · Acta Neuropathologica Communications · doi:10.1186/s40478-019-0822-3 · Cited by 47 · see citing works
- Authors
- Tibshirani, M., Zhao, B., Gentil, B. J., Minotti, S., Marques, C., Keith, J., Rogaeva, E., Zinman, L., Rouaux, C., Robertson, J., & Durham, H. D.
- Affiliations
- Montreal Neurological Institute and Hospital (CA)
- University of Toronto (CA)
- Inserm (FR)
- Sunnybrook Health Science Centre (CA)
- Corresponding author
- Durham, Heather D
- ORCID
- Venue
- Human Molecular Genetics
- Publisher
- Oxford University Press (OUP)
- Published
- 2017-07-26
- Volume
- 26
- Issue
- 21
- Pages
- 4142-4152
- ISSN
- 0964-6906 (ISSN-L)
- 1460-2083
- OpenAlex
- W2738143624
- Cited by
- 42
- References
- 48
- Citations by year
- 2026: 2 · 2025: 3 · 2024: 6 · 2023: 4 · 2022: 4 · 2021: 9 · 2020: 5 · 2019: 5 · 2018: 4
- FWCI
- 2.67
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Locations
- Human Molecular Genetics (publishedVersion)
- PubMed (publishedVersion)
- HAL (submittedVersion)
- Funders
- Amyotrophic Lateral Sclerosis Association
- Topics
- Health Sciences › Medicine › Neurology › Amyotrophic Lateral Sclerosis Research
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Genetic Neurodegenerative Diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Muscle Physiology and Disorders
- Keywords
- amyotrophic lateral sclerosis, chromatin remodeling, SMARCA4, motor neurons, FUS mutations, TDP-43 mutations, familial ALS, dendritic morphology
- MeSH terms
- Amyotrophic Lateral Sclerosis, Animals, Cell Differentiation, Cytoplasm, DNA Helicases, DNA-Binding Proteins, Humans, Motor Neurons, Mutation, Neurons, Nuclear Proteins, Spinal Cord, Transcription Factors, Protein Subunits, RNA-Binding Protein FUS, Chromatin Assembly and Disassembly, Mice
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review