Two new rare variants in the circadian “clock” gene may influence sleep pattern
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Both individuals with the rare CLOCK SNPs had the same pattern of sleep consisting of alternating phases of good sleep and insomnia over the course of a few days.
“both of these individuals had the same pattern of sleep which consisted of alternating phases of good sleep and insomnia over the course of a few days”
From Circadian genes, rhythms and the biology of mood disorders (2007) · cites this paper as Pirovano et al., 2005
Two rare SNPs in the 3′ flanking region of the CLOCK gene (3117 G to T and 3125 A to G) were identified in two subjects with major depression and not in any healthy controls in the study.
“two rare SNPs in the same region (3117 G to T and 3125 A to G) have been identified by Pirovano et al., in two subjects with major depression, and not in any of the healthy controls in their study (Pirovano et al., 2005).”
From Circadian genes, rhythms and the biology of mood disorders (2007) · cites this paper as Pirovano et al., 2005
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Cites
Molecular analysis of mammalian circadian rhythms
Reppert, S. M., & Weaver, D. R. (2001) · Annual Review of Physiology · doi:10.1146/annurev.physiol.63.1.647 · Cited by 1,444 · see citing works
Degradation of mRNA in eukaryotes
Beelman, C. A., & Parker, R. (1995) · Cell · doi:10.1016/0092-8674(95)90326-7 · Cited by 652 · see citing works
A CLOCK Polymorphism Associated with Human Diurnal Preference
Katzenberg, D. R., Young, T. B., Finn, L. A., Lin, L., King, D. P., Takahashi, J. S., & Mignot, E. J.-M. (1998) · SLEEP · doi:10.1093/sleep/21.6.569 · Cited by 587 · see citing works
Herrera, R. E., Shaw, P. E., & Nordheim, A. (1989) · Nature · doi:10.1038/340068a0 · Cited by 348 · see citing works
Benedetti, F., Serretti, A., Colombo, C., Barbini, B., Lorenzi, C., Campori, E., & Smeraldi, E. (2003) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.20038 · Cited by 324 · see citing works
Self-citationPeltz, S. W., Brown, A. H., & Jacobson, A. (1993) · Genes & Development · doi:10.1101/gad.7.9.1737 · Cited by 315 · see citing works
Control of messenger RNA stability in higher eukaryotes
Ross, J. (1996) · Trends in Genetics · doi:10.1016/0168-9525(96)10016-0 · Cited by 313 · see citing works
Post-transcriptional gene regulatory mechanisms in eukaryotes: an overview
Day, D., & Tuite, M. F. (1998) · Journal of Endocrinology · doi:10.1677/joe.0.1570361 · Cited by 304 · see citing works
Lowrey, P. L., & Takahashi, J. S. (2000) · Annual Review of Genetics · doi:10.1146/annurev.genet.34.1.533 · Cited by 293 · see citing works
Ray, A., LaForge, K. S., & Sehgal, P. B. (1990) · Molecular and Cellular Biology · doi:10.1128/mcb.10.11.5736 · Cited by 273 · see citing works
Bunney, W. E. (2000) · Neuropsychopharmacology · doi:10.1016/s0893-133x(99)00145-1 · Cited by 268 · see citing works
Serretti, A., Benedetti, F., Mandelli, L., Lorenzi, C., Pirovano, A., Colombo, C., & Smeraldi, E. (2003) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.20053 · Cited by 264 · see citing works
Self-citationMutations affecting stability and deadenylation of the yeast MFA2 transcript.Preprint
Muhlrad, D., & Parker, R. (1992) · Genes & Development · doi:10.1101/gad.6.11.2100 · Cited by 230 · see citing works
Chen, C.-Y. A., Chen, T.-M., & Shyu, A. (1994) · Molecular and Cellular Biology · doi:10.1128/mcb.14.1.416-426.1994 · Cited by 180 · see citing works
Positive and negative regulation of the human insulin gene by multiple trans-acting factors.
Boam, D. S. W., Clark, A. R., & Docherty, K. (1990) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)39070-2 · Cited by 158 · see citing works
Mitterauer, B. (2000) · Medical Hypotheses · doi:10.1054/mehy.1999.1039 · Cited by 41 · see citing works
Identification of a DNA binding site for the nuclear factor YY1 in the human GM-CSF core promoter
Ye, J., Young, H. A., Ortaldo, J. R., & Ghosh, P. (1994) · Nucleic Acids Research · doi:10.1093/nar/22.25.5672 · Cited by 35 · see citing works
Philibert, R. A., Caspers, K. M., Langbehn, D. R., Troughton, E. P., Yucuis, R., Sandhu, H. K., & Cadoret, R. J. (2003) · American Journal of Medical Genetics Part B Neuropsychiatric Genetics · doi:10.1002/ajmg.b.20062 · Cited by 28 · see citing works
Fuciarelli, M., Vienna, A., Paba, E., Bastianini, A., Sansonetti, B., Capucci, E., & Stefano, G. F. D. (1997) · American Journal of Human Biology · doi:10.1002/(sici)1520-6300(1997)9:5 · Cited by 24 · see citing works
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Research works printed but not linked: 2
- Hastings MH. Circadian clocks. Curr Biol 1997;7:R670 -R672.
- Serretti A, Cusin C, Benedetti F, Mandelli L, Pirovano A, Zanardi R et al. Insomnia improvement during antidepressant treatment is associated with CLOCK gene polymorphism. Am J Med Genet In press.
Cited by
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Circadian genes, rhythms and the biology of mood disorders
McClung, C. A. (2007) · Pharmacology & Therapeutics · doi:10.1016/j.pharmthera.2007.02.003 · Cited by 666 · see citing works
Acetylation of non-histone proteins modulates cellular signalling at multiple levels
Spange, S., Wagner, T., Heinzel, T., & Krämer, O. H. (2008) · The International Journal of Biochemistry & Cell Biology · doi:10.1016/j.biocel.2008.08.027 · Cited by 661 · see citing works
Association between polymorphisms in the Clock gene, obesity and the metabolic syndrome in man
SCOTT, E. M., Carter, A. M., & Grant, P. J. (2007) · International Journal of Obesity · doi:10.1038/sj.ijo.0803778 · Cited by 344 · see citing works
Clock Genes and Altered Sleep–Wake Rhythms: Their Role in the Development of Psychiatric Disorders
Charrier, A., Olliac, B., Roubertoux, P. L., & Tordjman, S. (2017) · International Journal of Molecular Sciences · doi:10.3390/ijms18050938 · Cited by 182 · see citing works
Saus, E., Soria, V., Escaramís, G., Vivarelli, F., Crespo, J. M., Kagerbauer, B., Menchón, J. M., Urretavizcaya, M., Gratacòs, M., & Estivill, X. (2010) · Human Molecular Genetics · doi:10.1093/hmg/ddq316 · Cited by 163 · see citing works
Utge, S., Soronen, P., Loukola, A., Kronholm, E., Ollila, H. M., Pirkola, S. P., Porkka‐Heiskanen, T., Partonen, T., & Paunio, T. (2010) · PLoS ONE · doi:10.1371/journal.pone.0009259 · Cited by 110 · see citing works
Molecular clocks, type 2 diabetes and cardiovascular disease
Prasai, M., George, J. T., & SCOTT, E. M. (2008) · Diabetes and Vascular Disease Research · doi:10.3132/dvdr.2008.015 · Cited by 76 · see citing works
Association ofCLOCK, ARNTL, andNPAS2gene polymorphisms and seasonal variations in mood and behavior
Kim, H.-I., Lee, H., Cho, C., Kang, S., Yoon, H., Park, Y.-M., Lee, S., Moon, J.-H., Song, H.-M., Lee, E., et al. (2015) · Chronobiology International · doi:10.3109/07420528.2015.1049613 · Cited by 55 · see citing works
Kinoshita, C., Okamoto, Y., Aoyama, K., & Nakaki, T. (2020) · Clocks & Sleep · doi:10.3390/clockssleep2030022 · Cited by 48 · see citing works
Singla, R., Mishra, A., & Cao, R. (2022) · Translational Psychiatry · doi:10.1038/s41398-022-02120-8 · Cited by 33 · see citing works
Tsuzaki, K., Kotani, K., Sano, Y., Fujiwara, S., Takahashi, K., & Sakane, N. (2010) · BMC Medical Genetics · doi:10.1186/1471-2350-11-150 · Cited by 30 · see citing works
Metabolic dysfunction and circadian rhythm abnormalities in adolescents with sleep disturbance
Tomoda, A., Kawatani, J., Joudoi, T., Hamada, A., & Miike, T. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.02.038 · Cited by 19 · see citing works
Freyberg, Z., Andreazza, A. C., McClung, C. A., & Phillips, M. L. (2024) · Biological Psychiatry Cognitive Neuroscience and Neuroimaging · doi:10.1016/j.bpsc.2024.07.011 · Cited by 16 · see citing works
Sleep and Depression: What We Know and What to Learn?
Antsyborov, A. V., Kalinchuk, A. V., & Dubatova, I. V. (2020) · Interactive science · doi:10.21661/r-551927 · Cited by 3 · see citing works
Borodkin, K., & Dagan, Y. (2011) · Cambridge University Press eBooks · doi:10.1017/cbo9780511777493.013 · Cited by 2 · see citing works
Duncan, W. C. (2009) · Birkhäuser Basel eBooks · doi:10.1007/978-3-7643-8567-5_7 · Cited by 1 · see citing works
Adolescents with Sleep Disturbance: Causes and Diagnosis
Tomoda, A., & Yamazaki, M. L. (2012) · InTech eBooks · doi:10.5772/28592
- Authors
- Pirovano, A., Lorenzi, C., Serretti, A., Ploia, C., Landoni, S., Catalano, M., Smeraldi, E., & Lorenzi, C.
- Affiliations
- Vita-Salute San Raffaele University (IT)
- Venue
- Genetics in Medicine
- Publisher
- Elsevier BV
- Published
- 2005-07
- Volume
- 7
- Issue
- 6
- Pages
- 455-457
- ISSN
- 1098-3600 (ISSN-L)
- OpenAlex
- W2056127448
- Cited by
- 17
- References
- 19
- Citations by year
- 2024: 1 · 2022: 1 · 2020: 2 · 2017: 1 · 2015: 1 · 2012: 1
- FWCI
- 0.49
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Genetics in Medicine (publishedVersion)
- PubMed (publishedVersion)
- Archivio istituzionale della ricerca (Alma Mater Studiorum Università di Bologna) (submittedVersion)
- Topics
- Life Sciences › Neuroscience › Endocrine and Autonomic Systems › Circadian rhythm and melatonin
- Social Sciences › Psychology › Experimental and Cognitive Psychology › Sleep and related disorders
- Life Sciences › Neuroscience › Cognitive Neuroscience › Sleep and Wakefulness Research
- Keywords
- clock genes, rare variants, sleep patterns, suprachiasmatic nucleus, circadian rhythm, genetic polymorphism, sleep timing, genotype-phenotype correlation, genetic association studies, gene-environment interaction
- MeSH terms
- Bipolar Disorder, Circadian Rhythm, Depressive Disorder, Humans, Sleep, Sleep Wake Disorders, Trans-Activators, Case-Control Studies, 3' Untranslated Regions, Polymorphism, Single Nucleotide, CLOCK Proteins
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