HADDOCK: A Protein−Protein Docking Approach Based on Biochemical or Biophysical Information

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Beware of Docking!

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Sequence co-evolution gives 3D contacts and structures of protein complexes

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Structural basis for signal-sequence recognition by the translocase motor SecA as determined by NMR.

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The Acidic Transcription Activator Gcn4 Binds the Mediator Subunit Gal11/Med15 Using a Simple Protein Interface Forming a Fuzzy Complex

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Computational prediction of protein–protein binding affinities

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3D RNA and Functional Interactions from Evolutionary Couplings

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Deep geometric representations for modeling effects of mutations on protein-protein binding affinity

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iSEE: Interface structure, evolution, and energy-based machine learning predictor of binding affinity changes upon mutations

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Mapping Monomeric Threading to Protein–Protein Structure Prediction

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A monoclonal antibody targeting nonjunctional claudin-1 inhibits fibrosis in patient-derived models by modulating cell plasticity

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HIV-1 integrase tetramers are the antiviral target of pyridine-based allosteric integrase inhibitors

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Bioinformatics tools and benchmarks for computational docking and 3D structure prediction of RNA-protein complexes

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New benchmark metrics for protein‐protein docking methods

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Allosteric HIV‐1 integrase inhibitors promote aberrant protein multimerization by directly mediating inter‐subunit interactions: Structural and thermodynamic modeling studies

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Pre- and post-docking sampling of conformational changes using ClustENM and HADDOCK for protein-protein and protein-DNA systems

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Structural Determination of Functional Domains in Early B-cell Factor (EBF) Family of Transcription Factors Reveals Similarities to Rel DNA-binding Proteins and a Novel Dimerization Motif

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Are protein-protein interfaces special regions on a protein’s surface?

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Biophysical and In Vivo Studies Identify a New Natural-Based Polyphenol, Counteracting Aβ Oligomerization In Vitro and Aβ Oligomer-Mediated Memory Impairment and Neuroinflammation in an Acute Mouse Model of Alzheimer's Disease

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Exploring the interplay between experimental methods and the performance of predictors of binding affinity change upon mutations in protein complexes

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Glucocorticoid receptor complexes form cooperatively with the Hsp90 co-chaperones Pp5 and FKBPs

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A membrane protein complex docking benchmark

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The Differential Regulation of p38α by the Neuronal Kinase Interaction Motif Protein Tyrosine Phosphatases, a Detailed Molecular Study

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Refinement of protein-protein complexes in contact map space with metadynamics simulations

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Structural Basis for the Regulation of the Mitogen-activated Protein (MAP) Kinase p38α by the Dual Specificity Phosphatase 16 MAP Kinase Binding Domain in Solution

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Exploring the interaction between T-cell antigen receptor-related genes and MAPT or ACHE using integrated bioinformatics analysis

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Accurate Protein Dynamic Conformational Ensembles: Combining AlphaFold, MD and Amide ¹⁵ N( ¹ H) NMR Relaxation

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Information-driven modelling of antibody–antigen complexes

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Linear antibody epitope prediction using AlphaFold2

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Behind the Scenes: Sources of Complementarity in R&D

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In Search of Complementarity in Innovation Strategy: Internal R&D and External Knowledge Acquisition

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