The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.
Architecture of the vertebrate egg coat and structural basis of the ZP2 block to polyspermy
Open accessPreprint — published as 10.1016/j.cell.2024.02.013 · Paper page
Abstract
SUMMARY: Post-fertilization cleavage of glycoprotein ZP2, a major subunit of egg zona pellucida (ZP) filaments, is crucial for mammalian reproduction by irreversibly blocking polyspermy. ZP2 processing is thought to inactivate a sperm-binding activity located upstream of the protein’s cleavage site; however, its molecular consequences and connection with ZP hardening are unknown. Here we report X-ray crystallographic, cryo-EM and biochemical studies showing that cleavage of ZP2 triggers its oligomerization. Deletion of the ZP-N1 domain that precedes the cleavage site of mouse ZP2 allows it to homodimerize even without processing, and animals homozygous for this variant are subfertile by having a semi-hardened ZP that allows sperm attachment but hinders penetration. Combined with the structure of a native egg coat filament, which reveals the molecular basis of heteromeric ZP subunit interaction, this suggests that oligomerization of cleaved ZP2 cross-links the ZP, rigidifying it and making it physically impenetrable to sperm.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Highly accurate protein structure prediction with AlphaFold
Jumper, J., Evans, R., Pritzel, A., Green, T., Figurnov, M., Ronneberger, O., Tunyasuvunakool, K., Bates, R., Žídek, A., Potapenko, A., et al. (2021) · Nature · doi:10.1038/s41586-021-03819-2 · Cited by 43,764
Flagged first, then by citations
Research works printed but not linked: 149
- 10.1016/S0070-2153(05)72001-9 · DOI
- 2020, Preventing polyspermy in mammalian eggs—Contributions of the membrane block and other mechanisms, Mol. Reprod. Dev, 87, 341, 10.1002/mrd.23331 · DOI
- 10.1016/0012-1606(81)90329-8 · DOI
- 10.1073/pnas.96.3.829 · DOI
- 10.1083/jcb.201112094 · DOI
- 10.1016/j.cell.2010.09.041 · DOI
- 10.1093/bioinformatics/btm265 · DOI
- 10.1038/nature07599 · DOI
- 10.1016/j.cell.2017.05.033 · DOI
- 10.1016/S1534-5807(03)00195-3 · DOI
- 10.1016/j.bbrc.2004.09.099 · DOI
- 10.1095/biolreprod.107.064568 · DOI
- 10.1038/ncb802 · DOI
- 10.1146/annurev.biochem.74.082803.133039 · DOI
- 10.1093/molbev/msp221 · DOI
- 10.1146/annurev-biochem-011520-105310 · DOI
- 10.1021/bi991154y · DOI
- 10.7554/eLife.08887 · DOI
- 10.1073/pnas.0401600101 · DOI
- 10.1073/pnas.1519803113 · DOI
- 2020, Cryo-EM structure of native human uromodulin, a zona pellucida module polymer, EMBO J, 39, e106807, 10.15252/embj.2020106807 · DOI
- 2020, The cryo-EM structure of the human uromodulin filament core reveals a unique assembly mechanism, Elife, 9, e60265, 10.7554/eLife.60265 · DOI
- 10.1083/jcb.201404025 · DOI
- 10.1016/j.devcel.2018.07.020 · DOI
- 10.1095/biolreprod43.5.891 · DOI
- 10.1038/s41467-019-10931-5 · DOI
- 10.1083/jcb.136.5.1099 · DOI
- 10.1242/dev.128.7.1119 · DOI
- 10.1093/jb/mvq086 · DOI
- 2021, Using machine learning to study protein-protein interactions: From the uromodulin polymer to egg zona pellucida filaments, Mol. Reprod. Dev, 88, 686, 10.1002/mrd.23538 · DOI
- 10.1021/bi048958k · DOI
- 10.1016/j.celrep.2017.05.011 · DOI
- 10.1038/nn1496 · DOI
- 10.3390/biom5043339 · DOI
- 10.1021/bi0512804 · DOI
- 2023, Accelerating crystal structure determination with iterative AlphaFold prediction, Acta Crystallogr. D Struct. Biol, 79, 234, 10.1107/S205979832300102X · DOI · Paper page
- 10.1016/0022-2836(85)90089-0 · DOI
- 10.1016/S0074-7696(08)61502-8 · DOI
- 10.1074/jbc.M304026200 · DOI
- 10.1016/bs.ctdb.2018.02.007 · DOI
- 10.1242/bio.036137 · DOI
- 10.1073/pnas.93.11.5431 · DOI
- 10.1242/dev.122.9.2903 · DOI
- 10.1242/dev.126.17.3847 · DOI
- 10.1093/biolre/ioab047 · DOI
- 2019, ZP4 confers structural properties to the zona pellucida essential for embryo development, Elife, 8, e48904, 10.7554/eLife.48904 · DOI
- 2022, Targeted deletion of liver-expressed Choriogenin L results in the production of soft eggs and infertility in medaka, Oryzias latipes, Zoological Lett, 8, 1, 10.1186/s40851-021-00185-9 · DOI
- 2022, Medaka, Oryzias latipes, egg envelopes are created by ovarian-expressed ZP proteins and liver-expressed choriogenins, Zoological Lett, 8, 11, 10.1186/s40851-022-00194-2 · DOI
- 2023, Egg envelope formation of medaka Oryzias latipes requires ZP proteins originating from both the liver and ovary, J. Biol. Chem, 299, 104600, 10.1016/j.jbc.2023.104600 · DOI
- 10.1098/rspb.1997.0046 · DOI
- 10.1016/j.bbapap.2007.10.011 · DOI
- 10.1002/jcp.21174 · DOI
- 10.1095/biolreprod.114.121335 · DOI
- 10.1002/mrd.1080320109 · DOI
- 2020, Mammalian egg coat modifications and the block to polyspermy, Mol. Reprod. Dev, 87, 326, 10.1002/mrd.23320 · DOI
- 2022, ASTL is mutated in female infertility, Hum. Genet, 141, 49, 10.1007/s00439-021-02388-8 · DOI
- 1995, Chorion hardening in medaka (Oryzias latipes) egg, The Fish Biology Journal MEDAKA, 7, 15
- 2022, Transglutaminase 2 crosslinks zona pellucida glycoprotein 3 to prevent polyspermy, Cell Death Differ, 29, 1466, 10.1038/s41418-022-00933-0 · DOI
- 10.1530/jrf.0.1000245 · DOI
- 10.1530/jrf.0.1170395 · DOI
- 10.1126/science.1188178 · DOI
- 2008, Cellular origin of the Bufo arenarum sperm receptor gp75, a ZP2 family member: its proteolysis after fertilization, Biol. Cell, 100, 219, 10.1042/BC20070052 · DOI
- 10.1083/jcb.201203062 · DOI
- 10.1002/mrd.21090 · DOI
- 2017, Polyspermy barriers: a plant perspective, Curr. Opin. Plant Biol, 35, 131, 10.1016/j.pbi.2016.11.012 · DOI
- 2020, Zona pellucida genes and proteins and human fertility, Trends Dev. Biol, 13, 21
- 2022, A recurrent ZP1 variant is responsible for oocyte maturation defect with degenerated oocytes in infertile females, Clin. Genet, 102, 22, 10.1111/cge.14144 · DOI
- 2023, A ZP1 gene mutation in a patient with empty follicle syndrome: A case report and literature review, Eur. J. Obstet. Gynecol. Reprod. Biol, 280, 193, 10.1016/j.ejogrb.2022.12.011 · DOI
- 2020, Novel ZP1 pathogenic variants identified in an infertile patient and a successful live birth following ICSI treatment, Clin. Genet, 97, 787, 10.1111/cge.13693 · DOI
- 2022, Novel Heterozygous Mutations in ZP2 Cause Abnormal Zona Pellucida and Female Infertility, Reprod. Sci, 29, 3047, 10.1007/s43032-022-00958-3 · DOI
- 2022, A novel gene mutation in ZP3 loop region identified in patients with empty follicle syndrome, Hum. Mutat, 43, 180, 10.1002/humu.24297 · DOI
- 10.1136/jclinpath-2020-207170 · DOI
- 2021, Highly accurate protein structure prediction for the human proteome, Nature, 596, 590, 10.1038/s41586-021-03828-1 · DOI · Paper page
- 10.1093/oxfordjournals.jbchem.a022310 · DOI
- 2020, Trefoil factors share a lectin activity that defines their role in mucus, Nat. Commun, 11, 2265, 10.1038/s41467-020-16223-7 · DOI
- 10.1083/jcb.98.3.795 · DOI
- 10.1073/pnas.1922650117 · DOI
- 10.1538/expanim.59.13 · DOI
- Hekkelman, M.L. , de Vries, I. , Joosten, R.P. , and Perrakis, A. (2022). AlphaFill: enriching AlphaFold models with ligands and cofactors. Nat. Methods, 1–9. https://doi.org/10.1038/s41592-022-01685-y. · DOI · Paper page
- 10.1107/S0907444911007773 · DOI
- 10.1107/S010876731809640X · DOI
- 10.1385/1-59745-266-1:215 · DOI
- 2016, SeqTools: visual tools for manual analysis of sequence alignments, BMC Res. Notes, 9, 39, 10.1186/s13104-016-1847-3 · DOI
- 10.1107/S0907444911056058 · DOI · Paper page
- 10.1038/nprot.2007.406 · DOI
- 2022, ColabFold: making protein folding accessible to all, Nat. Methods, 19, 679, 10.1038/s41592-022-01488-1 · DOI · Paper page
- 2020, Current developments in Coot for macromolecular model building of Electron Cryo-microscopy and Crystallographic Data, Protein Sci, 29, 1069
- 10.1093/bioinformatics/btu743 · DOI
- 10.1038/nmeth.4169 · DOI · Paper page
- 2019, FoldX 5.0: working with RNA, small molecules and a new graphical interface, Bioinformatics, 35, 4168, 10.1093/bioinformatics/btz184 · DOI
- 10.1093/nar/gki385 · DOI
- 10.1093/nar/gkaa977 · DOI · Paper page
- 10.1107/S2059798318002425 · DOI
- 10.1093/molbev/mst010 · DOI · Paper page
- 2020, MobiDB-lite 3.0: fast consensus annotation of intrinsic disorder flavors in proteins, Bioinformatics, 36, 5533
- 10.1002/cpps.20 · DOI · Paper page
- 10.1107/S0907444909042073 · DOI · Paper page
- 10.1093/bioinformatics/14.4.380 · DOI
- 10.1038/s41467-022-34630-w · DOI
- 10.1093/nar/gkt940 · DOI
- 10.1107/S0021889807021206 · DOI · Paper page
- 10.1107/S090744490705024X · DOI · Paper page
- 10.1107/S0907444909012098 · DOI
- 10.1107/S0907444912001308 · DOI · Paper page
- 10.1107/S2059798318004655 · DOI
- 10.1016/j.jmb.2007.05.022 · DOI
- 10.1038/nsmb.3115 · DOI
- 10.1016/j.jsb.2005.07.007 · DOI
- 1995, Knowledge-based protein secondary structure assignment, Proteins: Struct. Funct. Bioinf, 23, 566, 10.1002/prot.340230412 · DOI
- 10.1002/jcc.20084 · DOI
- 10.1186/1471-2105-7-339 · DOI
- 10.1002/PRO.3943 · DOI
- 10.1107/S0907444909047337 · DOI · Paper page
- 10.1002/prot.22570 · DOI
- 10.1091/mbc.01-09-0440 · DOI
- 10.1107/S0907444906029799 · DOI
- 2016, Easy mammalian expression and crystallography of maltose-binding protein-fused human proteins, J. Struct. Biol, 194, 1, 10.1016/j.jsb.2016.01.016 · DOI
- 2018, Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1, Structure, 26, 801, 10.1016/j.str.2018.03.014 · DOI
- 10.1016/j.str.2017.01.002 · DOI
- 10.1093/nar/24.21.4362 · DOI
- 2019, Mammalian plasma fetuin-B is a selective inhibitor of ovastacin and meprin metalloproteinases, Sci. Rep, 9, 546, 10.1038/s41598-018-37024-5 · DOI
- 2015, The MORPHEUS II protein crystallization screen, Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun, 71, 831, 10.1107/S2053230X1500967X · DOI
- 10.1107/S0907444905024984 · DOI
- 10.1107/S0909049512006395 · DOI
- 10.1107/S0909049506004341 · DOI
- 10.1107/S0909049512009715 · DOI
- 10.1107/S1600577518007166 · DOI
- 2015, Status of the crystallography beamlines at Diamond Light Source, Eur. Phys. J. Plus, 130, 56, 10.1140/epjp/i2015-15056-x · DOI
- 10.1107/S0907444995008754 · DOI
- 10.1107/S0907444906022116 · DOI
- 10.1107/S090744490903947X · DOI
- 10.1073/pnas.94.5.2050 · DOI
- 2014, Deformable elastic network refinement for low-resolution macromolecular crystallography, Acta Crystallogr. D Biol. Crystallogr, 70, 2241, 10.1107/S1399004714016496 · DOI
- 10.1107/S0907444906012650 · DOI
- 10.1046/j.1440-169X.1998.t01-5-00005.x · DOI
- 10.1038/s41592-020-00990-8 · DOI
- 10.1107/S2052252519007619 · DOI
- 10.1093/nar/gku316 · DOI · Paper page
- 2022, AlphaFold2: A Role for Disordered Protein/Region Prediction?, Int. J. Mol. Sci, 23, 4591, 10.3390/ijms23094591 · DOI · Paper page
- 10.1002/pro.3280 · DOI
- 10.1093/nar/gkw408 · DOI · Paper page
- 10.1093/nar/gki476 · DOI
- 10.1242/jcs.221648 · DOI
- 10.1371/journal.pone.0142755 · DOI
- 1971, Studies on the fertilization of mouse eggs in vitro. I. In vitro fertilization of mouse eggs by fresh epididymal sperm, . Japan. J. Anim. Reprod, 16, 147, 10.1262/jrd1955.16.147 · DOI
- Evans, R. , O’Neill, M. , Pritzel, A. , Antropova, N. , Senior, A. , Green, T. , Žídek, A. , Bates, R. , Blackwell, S. , Yim, J. , et al. (2021). Protein complex prediction with AlphaFold-Multimer. bioRxiv, 2021.10.04.463034. https://doi.org/10.1101/2021.10.04.463034. · DOI · Paper page
- 10.1016/j.jmb.2010.08.023 · DOI
- 10.1093/NAR/GKAB1061 · DOI · Paper page
- 10.1093/bioinformatics/btu744 · DOI
Metadata
- Authors
- Nishio, S., Emori, C., Wiseman, B., Fahrenkamp, D., Dioguardi, E., Zamora-Caballero, S., Bokhove, M., Han, L., Stsiapanava, A., Lu, Y., Kodani, M., Bainbridge, R. E., Komondor, K. M., Carlson, A. E., Landreh, M., de Sanctis, D., Yasumasu, S., Ikawa, M., & Jovine, L.
- Affiliations
- Karolinska Institutet (SE)
- Immunology Frontier Research Center, The University of Osaka (JP)
- Research Institute for Microbial Diseases, The University of Osaka (JP)
- University of Pittsburgh (US)
- Uppsala University (SE)
- European Synchrotron Radiation Facility (FR)
- Sophia University (JP)
- Center for Infectious Disease Education and Research, The University of Osaka (JP)
- Corresponding author
- Jovine, Luca
- ORCID
- Nishio, Shunsuke
- Emori, Chihiro
- Wiseman, Benjamin
- Fahrenkamp, Dirk
- Dioguardi, Elisa
- Zamora-Caballero, Sara
- Bokhove, Marcel
- Han, Ling
- Stsiapanava, Alena
- Lu, Yonggang
- Kodani, Mayo
- Bainbridge, Rachel E.
- Komondor, Kayla M.
- Carlson, Anne E.
- Landreh, Michael
- de Sanctis, Daniele
- Yasumasu, Shigeki
- Ikawa, Masahito
- Jovine, Luca
- Venue
- Cell
- Publisher
- openRxiv
- Published
- 2023-06-22
- Volume
- 187
- Issue
- 6
- Pages
- 1440-1459.e24
- ISSN
- 0092-8674 (ISSN-L)
- PMC
- PMC10976854
- OpenAlex
- W4392801959
- Cited by
- 54
- References
- 1
- Citations by year
- 2026: 21 · 2025: 26 · 2024: 7
- FWCI
- 22.37
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Licence
- cc-by
- Locations
- Cell (publishedVersion, cc-by)
- bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion, cc-by-nc-nd)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Uppsala University Publications (Uppsala University) (submittedVersion, other-oa)
- HAL (submittedVersion, cc-by)
- DIGITAL.CSIC (Spanish National Research Council (CSIC)) (submittedVersion, cc-by)
- HZB Repository (Helmholtz-Zentrum Berlin für Materialien und Energie GmbH (HZB)) (submittedVersion, other-oa)
- Funders
- Diamond Light Source
- Kempe Foundation
- DeepMind
- Deutsche Forschungsgemeinschaft (401763100)
- European Synchrotron Radiation Facility
- Knut och Alice Wallenbergs Stiftelse (2018.0042)
- Vetenskapsrådet (2016-03999, 2020-04936, 2019-01961)
- Kempestiftelserna
- Fukushima University
- Stockholms Universitet
- Science for Life Laboratory
- National Institutes of Health
- Helmholtz-Zentrum Berlin für Materialien und Energie
- Japan Society for the Promotion of Science (23K05879, 22K15103, 20K06774, 19H05750, 23K20043, 21H05033, 24K02033)
- Center for Innovative Medicine
- National Institute of General Medical Sciences (R01GM125638)
- Topics
- Health Sciences › Medicine › Reproductive Medicine › Reproductive Biology and Fertility
- Health Sciences › Medicine › Reproductive Medicine › Sperm and Testicular Function
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Physiology › Reproductive biology and impacts on aquatic species
- Keywords
- zona pellucida, ZP2, polyspermy block, N-terminal cleavage, protein oligomerization, ZP3, ZP1, ZP4, sperm binding, fertilisation (biology), DNA double helix
- MeSH terms
- Zona Pellucida Glycoproteins, Female, Glycoproteins, Humans, Male, Ovum, Semen, Spermatozoa, Zona Pellucida
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review