PreprintCited by 1Bacterial Genetics and BiotechnologyBacteriophages and microbial interactionsAdvanced Electron Microscopy Techniques and Applications

The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.

Function and firing of the Streptomyces coelicolor contractile injection system requires the membrane protein CisA

Open access

Preprint — published as 10.7554/elife.104064 · Paper page

Abstract

Bacterial contractile injection systems (CIS) are phage tail-like macromolecular complexes that mediate cell-cell interactions by injecting effector proteins into target cells. CIS from Streptomyces coelicolor (CIS Sc ) are localized in the cytoplasm. Under stress, they induce cell death and impact the Streptomyces life cycle. It remains unknown, however, whether CIS Sc require accessory proteins to directly interact with the cytoplasmic membrane to function. Here, we characterize the putative membrane adaptor CisA, a conserved factor in CIS gene clusters across Streptomyces species. We show by cryo-electron tomography imaging and in vivo assays that CIS Sc contraction and function depend on CisA. Using single-particle cryo-electron microscopy, we provide an atomic model of the extended CIS Sc apparatus; however, CisA is not part of the complex. Instead, our findings show that CisA is a membrane protein with a cytoplasmic N-terminus predicted to interact with CIS Sc components, thereby providing a possible mechanism for mediating CIS Sc recruitment to the membrane and subsequent firing. Our work shows that CIS function in multicellular bacteria is distinct from Type 6 Secretion Systems and extracellular CIS, and possibly evolved due to the role CIS Sc play in regulated cell death.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1101/2024.06.25.600559

Cites

2 of 2 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Flagged first, then by citations

Research works printed but not linked: 61

  1. Lin L . The expanding universe of contractile injection systems in bacteria. Curr Opin Microbiol. 2024 Jun 1;79:102465. · DOI
  2. 10.1016/j.tcb.2017.05.003 · DOI
  3. 10.1111/mmi.13921 · DOI
  4. 10.1038/nature17971 · DOI
  5. 10.1126/science.aan7904 · DOI
  6. 10.1099/MIC.0.001367 · DOI
  7. 10.1099/mic.0.000789 · DOI
  8. 10.1016/j.celrep.2019.08.096 · DOI
  9. 10.1038/s41467-021-23777-7 · DOI
  10. 10.1038/nature10846 · DOI
  11. 10.1038/nature14667 · DOI
  12. 10.1126/sciadv.adp7088 · DOI · Paper page
  13. 10.1038/s41564-022-01059-2 · DOI
  14. 10.1126/science.1246794 · DOI · Paper page
  15. 10.1111/j.1574-6968.2007.00645.x · DOI
  16. 10.1016/j.cell.2019.02.020 · DOI
  17. 10.1038/s41564-021-01055-y · DOI
  18. 10.1038/s41564-023-01341-x · DOI
  19. 10.1038/s41467-023-37087-7 · DOI
  20. 10.1038/s41598-021-99490-8 · DOI
  21. 2023, Intracellular Phage Tail-Like Nanostructures Affect Susceptibility of Streptomyces lividans to Osmotic Stress, mSphere, 8, e00114
  22. 10.1038/s41467-024-48834-9 · DOI
  23. 2023, The Best of Both Worlds—Streptomyces coelicolor and Streptomyces venezuelae as Model Species for Studying Antibiotic Production and Bacterial Multicellular Development, J Bacteriol, 205, e00153
  24. 10.1038/nrmicro1968 · DOI
  25. 10.1038/s41564-019-0530-6 · DOI
  26. 10.1111/mmi.12974 · DOI
  27. 10.1038/s41586-020-2186-z · DOI
  28. 10.1006/jmbi.1998.2412 · DOI
  29. 10.7554/eLife.63387 · DOI
  30. 10.1111/j.1365-2958.2012.08070.x · DOI
  31. 10.1038/309462a0 · DOI
  32. 10.15252/embj.2018100886 · DOI
  33. 10.1126/science.adp0614 · DOI
  34. 2024, Assembly of a unique membrane complex in type VI secretion systems of Bacteroidota, Nat Commun, 15, 429, 10.1038/s41467-023-44426-1 · DOI
  35. 10.1016/j.mib.2024.102429 · DOI
  36. 10.1099/mic.0.001473 · DOI
  37. 10.1038/s41587-023-01773-0 · DOI · Paper page
  38. 10.1073/pnas.0337542100 · DOI
  39. 10.1016/S0065-2164(04)54004-2 · DOI
  40. 10.1251/bpo70 · DOI
  41. 10.1128/mBio.00684-13 · DOI
  42. 2024, Identification of novel tail-anchored membrane proteins integrated by the bacterial twin--arginine translocase, Microbiology (Reading, 170, 001431
  43. 10.1038/nmeth.4193 · DOI
  44. 10.1038/srep10317 · DOI
  45. 10.1038/nmeth.4169 · DOI · Paper page
  46. 10.1038/s42003-018-0242-0 · DOI · Paper page
  47. 10.1016/j.jsb.2012.09.006 · DOI · Paper page
  48. 10.1007/978-1-4939-7033-9_27 · DOI
  49. 10.1016/j.jsb.2005.07.007 · DOI
  50. 10.1006/jsbi.1996.0013 · DOI
  51. 10.1038/s41592-019-0580-y · DOI
  52. 10.1107/S0907444910007493 · DOI · Paper page
  53. 2013, High-resolution comparative modeling with RosettaCM, Struct Lond Engl, 21, 1735
  54. 10.1107/S0907444909052925 · DOI · Paper page
  55. 10.1038/nchembio.1143 · DOI
  56. Ef P , Td G , Cc H , Gs C , Dm G , Ec M , et al. UCSF Chimera - a visualization system for exploratory research and analysis. J Comput Chem. 2004 Oct 2022 May 17];25(13). · DOI
  57. 10.1002/pro.3235 · DOI · Paper page
  58. 10.1038/S41592-022-01488-1 · DOI · Paper page
  59. 10.15252/msb.202311544 · DOI
  60. 10.1093/nar/gkae241 · DOI
  61. 10.1111/j.1574-6968.2008.01070.x · DOI

Metadata

Authors
Casu, B., Sallmen, J. W., Haas, P. E., Chandra, G., Afanasyev, P., Xu, J., Pilhofer, M., & Schlimpert, S.
Affiliations
  • ETH Zurich (CH)
  • John Innes Centre (GB)
Corresponding author
  • Pilhofer, Martin
  • Schlimpert, Susan
Venue
eLife
Publisher
openRxiv
Published
2024-06-25
Volume
14
ISSN
2050-084X (ISSN-L)
OpenAlex
W4400029996
Cited by
1
References
2
Citations by year
2026: 1
FWCI
0.59
Type
journal article
Language
en
Open access
Locations
  • eLife (publishedVersion, cc-by)
  • bioRxiv (Cold Spring Harbor Laboratory) (acceptedVersion)
Funders
  • Royal Society (URF\R1\180075, URF\\R\\231009)
  • Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung (212592)
  • Eidgenössische Technische Hochschule Zürich
  • NOMIS Stiftung
  • Biotechnology and Biological Sciences Research Council (BB/T015349/1, BB/X01097X/1)
  • European Research Council (10.3030/679209)
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
  • Life Sciences › Immunology and Microbiology › Virology › Bacteriophages and microbial interactions
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Structural Biology › Advanced Electron Microscopy Techniques and Applications
Keywords
Streptomyces coelicolor, contractile injection systems, CISA, membrane proteins, plasma membrane, regulated cell death, multicellular bacteria, type VI secretion system, cryo-electron tomography, cryo-electron microscopy, atomic models

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review