The DOI matches its Crossref record; 37 of the 37 references it cites were found in a registry or an index.
Linking photoreceptor excitation to changes in plant architecture
Open accessAbstract
Plants sense neighbor proximity as a decrease in the ratio of red to far-red light, which triggers a series of developmental responses. In Arabidopsis , phytochrome B (PHYB) is the major sensor of shade, but PHYB excitation has not been linked directly to a growth response. We show that the basic helix–loop–helix (bHLH) transcription factor PIF7 (phytochrome-interacting factor 7), an interactor of PHYB, accumulates in its dephosphorylated form in shade, allowing it to bind auxin biosynthetic genes and increase their expression. New auxin synthesized through a PIF7-regulated pathway is required for shade-induced growth, linking directly the perception of a light quality signal to a rapid growth response.
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Cites
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
Huang, D. W., Sherman, B. T., & Lempicki, R. A. (2009) · Nature Protocols · doi:10.1038/nprot.2008.211 · Cited by 35,890
Trapnell, C., Williams, B. A., Pertea, G., Mortazavi, A., Kwan, G., van Baren, M. J., Salzberg, S. L., Wold, B. J., & Pachter, L. (2010) · Nature Biotechnology · doi:10.1038/nbt.1621 · Cited by 15,556
Huang, D. W., Sherman, B. T., & Lempicki, R. A. (2009) · Nucleic Acids Research · doi:10.1093/nar/gkn923 · Cited by 14,108
Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis
Lister, R., O'Malley, R. C., Tonti-Filippini, J., Gregory, B. D., Berry, C. C., Millar, A. H., & Ecker, J. R. (2008) · Cell · doi:10.1016/j.cell.2008.03.029 · Cited by 2,418
Self-citationA Role for Flavin Monooxygenase-Like Enzymes in Auxin Biosynthesis
Zhao, Y., Christensen, S. K., Fankhauser, C., Cashman, J. R., Cohen, J. D., Weigel, D., & Chory, J. (2001) · Science · doi:10.1126/science.291.5502.306 · Cited by 1,225
Self-citationTao, Y., Ferrer, J.-L., Ljung, K., Pojer, F., Hong, F., Long, J. A., Li, L., Moreno, J. E., Bowman, M. E., Ivans, L. J., et al. (2008) · Cell · doi:10.1016/j.cell.2008.01.049 · Cited by 1,059
Self-citationThe main auxin biosynthesis pathway in Arabidopsis
Mashiguchi, K., Tanaka, K., Sakai, T., Sugawara, S., Kawaide, H., Natsume, M., Hanada, A., Yaeno, T., Shirasu, K., Yao, H., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1108434108 · Cited by 990
PIFs: pivotal components in a cellular signaling hub
Leivar, P., & Quail, P. H. (2011) · Trends in Plant Science · doi:10.1016/j.tplants.2010.08.003 · Cited by 972
Reed, J. W., Nagpal, P., Poole, D. S., Furuya, M., & Chory, J. (1993) · The Plant Cell · doi:10.1105/tpc.5.2.147 · Cited by 943
Self-citationLorrain, S., Allen, T., Duek, P. D., Whitelam, G. C., & Fankhauser, C. (2008) · The Plant Journal · doi:10.1111/j.1365-313x.2007.03341.x · Cited by 812
Cited by
Photoreceptor Signaling Networks in Plant Responses to Shade
Casal, J. J. (2013) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-050312-120221 · Cited by 865
PIFs: Systems Integrators in Plant Development
Leivar, P., & Monte, E. (2014) · The Plant Cell · doi:10.1105/tpc.113.120857 · Cited by 614
Patterns of population epigenomic diversity
Schmitz, R. J., Schultz, M. D., Urich, M. A., Nery, J. R., Pelizzola, M., Libiger, O., Alix, A., McCosh, R. B., Chen, H., Schork, N. J., et al. (2013) · Nature · doi:10.1038/nature11968 · Cited by 572
Self-citationLight Regulation of Plant Defense
Ballaré, C. L. (2014) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-050213-040145 · Cited by 560
Molecular mechanisms underlying phytochrome-controlled morphogenesis in plants
Legris, M., Ince, Y. Ç., & Fankhauser, C. (2019) · Nature Communications · doi:10.1038/s41467-019-13045-0 · Cited by 429
Metadata
- Authors
- Li, L., Ljung, K., Breton, G., Schmitz, R. J., Pruneda-Paz, J., Cowing-Zitron, C., Cole, B. J., Ivans, L. J., Pedmale, U. V., Jung, H.-S., Ecker, J. R., Kay, S. A., & Chory, J.
- Venue
- Genes & Development
- Publisher
- Cold Spring Harbor Laboratory
- Published
- 2012-04-15
- Volume
- 26
- Issue
- 8
- Pages
- 785-790
- ISSN
- 0890-9369 (ISSN-L)
- 1549-5477
- OpenAlex
- W2139364461
- Cited by
- 536
- References
- 37
- Type
- posted content
- Language
- en
- Open access
- diamond
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- Li, L., Ljung, K., Breton, G., Schmitz, R. J., Pruneda-Paz, J., Cowing-Zitron, C., Cole, B. J., Ivans, L. J., Pedmale, U. V., Jung, H.-S., Ecker, J. R., Kay, S. A., & Chory, J. (2012). Linking photoreceptor excitation to changes in plant architecture. Genes & Development. https://doi.org/10.1101/gad.187849.112
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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