Photoreceptor Signaling Networks in Plant Responses to Shade

Casal, Jorge J.

doi:10.1146/annurev-arplant-050312-120221

Cited by 866Light effects on plantsPlant Parasitism and ResistancePlant Molecular Biology Research

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Photoreceptor Signaling Networks in Plant Responses to Shade

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Casal, Jorge J.·2013·Annual Review of Plant Biology

DOI 10.1146/annurev-arplant-050312-120221

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Abstract

The dynamic light environment of vegetation canopies is perceived by phytochromes, cryptochromes, phototropins, and UV RESISTANCE LOCUS 8 (UVR8). These receptors control avoidance responses to preclude exposure to limiting or excessive light and acclimation responses to cope with conditions that cannot be avoided. The low red/far-red ratios of shade light reduce phytochrome B activity, which allows PHYTOCHROME INTERACTING FACTORS (PIFs) to directly activate the transcription of auxin-synthesis genes, leading to shade-avoidance responses. Direct PIF interaction with DELLA proteins links gibberellin and brassinosteroid signaling to shade avoidance. Shade avoidance also requires CONSTITUTIVE PHOTOMORPHOGENESIS 1 (COP1), a target of cryptochromes, phytochromes, and UVR8. Multiple regulatory loops and the input of the circadian clock create a complex network able to respond even to subtle threats of competition with neighbors while still compensating for major environmental fluctuations such as the day-night cycles.

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Plants quantify R/FR through the phytochrome system and react with the shade avoidance syndrome that enables plants to outgrow competitors for light.
“Plants quantify this ratio through the phytochrome system and react with the shade avoidance syndrome that enables plants to outgrow the competitors for light (Casal, 2013; Pierik and de Wit, 2014).”
From Shaping plant architecture (2015) · cites this paper as Casal, 2013

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Photocontrol of stem elongation in plant neighbourhoods: effects of photon fluence rate under natural conditions of radiation
Ballaré, C. L., Scopel, A. L., & Sánchez, R. A. (1991) · Plant Cell & Environment · doi:10.1111/j.1365-3040.1991.tb01371.x · Cited by 187
PHYTOCHROME CONTROL OF SEED GERMINATION IN THE TROPICAL RAIN FOREST PIONEER TREES CECROPIA OBTUSIFOLIA AND PIPER AURITUM AND ITS ECOLOGICAL SIGNIFICANCE
Vázquez-Yanes, C., & Smith, H. (1982) · New Phytologist · doi:10.1111/j.1469-8137.1982.tb03405.x · Cited by 186
Remote sensing of future competitors: Impacts on plant defenses
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Phytochrome B inhibits binding of phytochrome‐interacting factors to their target promoters
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Maize Leaves Turn Away from Neighbors
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Photoconversion and Nuclear Trafficking Cycles Determine Phytochrome A's Response Profile to Far-Red Light
Rausenberger, J., Tscheuschler, A., Nordmeier, W., Wüst, F., Timmer, J., Schäfer, E., Fleck, C. C., & Hiltbrunner, A. (2011) · Cell · doi:10.1016/j.cell.2011.07.023 · Cited by 176
Uncoupling light quality from light irradiance effects in Helianthus annuus shoots: putative roles for plant hormones in leaf and internode growth
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Searching for a photocycle of the cryptochrome photoreceptors
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Light and shade in the photocontrol of Arabidopsis growth
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Phytochrome A, phytochrome B and HY4 are involved in hypocotyl growth responses to natural radiation in Arabidopsis: weak de‐etiolation of the phyA mutant under dense canopies
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Identification of Primary Target Genes of Phytochrome Signaling. Early Transcriptional Control during Shade Avoidance Responses in Arabidopsis
Roig‐Villanova, I., Bou‐Torrent, J., Sorin, C., Devlin, P. F., & Martínez‐García, J. F. (2006) · PLANT PHYSIOLOGY · doi:10.1104/pp.105.076331 · Cited by 153
Phytochrome B in the Mesophyll Delays Flowering by Suppressing FLOWERING LOCUS T Expression in Arabidopsis Vascular Bundles
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The Arabidopsis thaliana myo-Inositol 1-Phosphate Synthase (EC 5.5.1.4)
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AtBBX21 and COP1 genetically interact in the regulation of shade avoidance
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FHY1 Mediates Nuclear Import of the Light-Activated Phytochrome A Photoreceptor
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Rapid photomodulation of stem extension in light-grownSinapis alba L.
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PHYTOCHROME-INTERACTING FACTOR 4 and 5 (PIF4 and PIF5) Activate the Homeobox ATHB2 and Auxin-Inducible IAA29 Genes in the Coincidence Mechanism Underlying Photoperiodic Control of Plant Growth of Arabidopsis thaliana
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How portulaca seedlings avoid their neighbours
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Phytochromes Regulate SA and JA Signaling Pathways in Rice and Are Required for Developmentally Controlled Resistance to Magnaporthe grisea
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COP1-Mediated Degradation of BBX22/LZF1 Optimizes Seedling Development in Arabidopsis
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Acceleration of Flowering during Shade Avoidance in Arabidopsis Alters the Balance betweenFLOWERING LOCUS C-Mediated Repression and Photoperiodic Induction of Flowering
Wollenberg, A. C., Strasser, B., Cerdán, P. D., & Amasino, R. M. (2008) · PLANT PHYSIOLOGY · doi:10.1104/pp.108.125468 · Cited by 125
CRYPTOCHROME 1 Is Implicated in Promoting R Protein-Mediated Plant Resistance to Pseudomonas syringae in Arabidopsis
Wu, L., & Yang, H. (2010) · Molecular Plant · doi:10.1093/mp/ssp107 · Cited by 118
Changes in leaf optical properties associated with light‐dependent chloroplast movements
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Far-red enrichment and photosynthetically active radiation level influence leaf senescence in field-grown sunflower
Rousseaux, M. C., Hall, A. J., & Sánchez, R. A. (1996) · Physiologia Plantarum · doi:10.1034/j.1399-3054.1996.960208.x · Cited by 114
Phototropins But Not Cryptochromes Mediate the Blue Light-Specific Promotion of Stomatal Conductance, While Both Enhance Photosynthesis and Transpiration under Full Sunlight
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Stem Transcriptome Reveals Mechanisms to Reduce the Energetic Cost of Shade-Avoidance Responses in Tomato
Cagnola, J. I., Ploschuk, E. L., Benech-Arnold, T., Finlayson, S. A., & Casal, J. J. (2012) · PLANT PHYSIOLOGY · doi:10.1104/pp.112.201921 · Cited by 112
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Phytochrome B and the Regulation of Circadian Ethylene Production in Sorghum1
Finlayson, S. A., Lee, I., & Morgan, P. W. (1998) · PLANT PHYSIOLOGY · doi:10.1104/pp.116.1.17 · Cited by 111
Phytochrome Signaling in Green Arabidopsis Seedlings: Impact Assessment of a Mutually Negative phyB–PIF Feedback Loop
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An Integrative Model for Phytochrome B Mediated Photomorphogenesis: From Protein Dynamics to Physiology
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Phytochrome B increases drought tolerance by enhancing ABA sensitivity in Arabidopsis thaliana
González, C. V., Ibarra, S. E., Píccoli, P., Botto, J. F., & Boccalandro, H. E. (2012) · Plant Cell & Environment · doi:10.1111/j.1365-3040.2012.02529.x · Cited by 109
A Genome-Wide Association Study Identifies Variants Underlying the Arabidopsis thaliana Shade Avoidance Response
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Functional ecology of a blue light photoreceptor: effects of phototropin‐1 on root growth enhance drought tolerance in Arabidopsis thaliana
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Synergism of Red and Blue Light in the Control of Arabidopsis Gene Expression and Development
Sellaro, R., Hoecker, U., Yanovsky, M. J., Chory, J., & Casal, J. J. (2009) · Current Biology · doi:10.1016/j.cub.2009.05.062 · Cited by 104
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Differential genetic variation in adaptive strategies to a common environmental signal in Arabidopsis accessions: phytochrome‐mediated shade avoidance
Botto, J. F., & SMITH, H. (2002) · Plant Cell & Environment · doi:10.1046/j.0016-8025.2001.00812.x · Cited by 102
The shade avoidance syndrome in Arabidopsis: a fundamental role for atypical basic helix–loop–helix proteins as transcriptional cofactors
Galstyan, A., Cifuentes‐Esquivel, N., Bou‐Torrent, J., & Martínez‐García, J. F. (2011) · The Plant Journal · doi:10.1111/j.1365-313x.2011.04485.x · Cited by 96
A Constitutive Shade-Avoidance Mutant Implicates TIR-NBS-LRR Proteins inArabidopsisPhotomorphogenic Development
Soverna, A. F., Harmon, F. G., Storani, L., Karayekov, E., Staneloni, R. J., Gassmann, W., Más, P., Casal, J. J., Kay, S. A., & Yanovsky, M. J. (2006) · The Plant Cell · doi:10.1105/tpc.105.038810 · Cited by 96
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Low red/far-red ratios delay spike and stem growth in wheat
Ugarte, C. C., Trupkin, S. A., Ghiglione, H., Slafer, G. A., & Casal, J. J. (2010) · Journal of Experimental Botany · doi:10.1093/jxb/erq140 · Cited by 94
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Brassinosteroid Mutants Uncover Fine Tuning of Phytochrome Signaling
Luccioni, L. G., Oliverio, K. A., Yanovsky, M. J., Boccalandro, H. E., & Casal, J. J. (2002) · PLANT PHYSIOLOGY · doi:10.1104/pp.010668 · Cited by 90
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Interaction with plant transcription factors can mediate nuclear import of phytochrome B
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The CRYPTOCHROME1-Dependent Response to Excess Light Is Mediated through the Transcriptional Activators ZINC FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM LIKE1 and ZML2 in Arabidopsis
Shaikhali, J., Barajas-López, J. D. D., Ötvös, K., Kremnev, D., Garcia, A. S., Srivastava, V., Wingsle, G., Bakó, L., & Strand, Å. (2012) · The Plant Cell · doi:10.1105/tpc.112.100099 · Cited by 87
Evidence that Heavy Grazing May Promote the Germination of Lolium multiflorum Seeds via Phytochrome-Mediated Perception of High Red/Far-Red Ratios
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Tissue-Autonomous Promotion of Palisade Cell Development by Phototropin 2 inArabidopsis
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Automated analysis of hypocotyl growth dynamics during shade avoidance in Arabidopsis
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Antagonistic but Complementary Actions of Phytochromes A and B Allow Optimum Seedling De-Etiolation
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Phytochrome-Mediated Phototropism in De-Etiolated Seedlings
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Repression of shade‐avoidance reactions by sunfleck induction of HY5 expression in Arabidopsis
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Diurnal Dependence of Growth Responses to Shade in Arabidopsis: Role of Hormone, Clock, and Light Signaling
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Regulation of phytochrome B signaling by phytochrome A and FHY1 in Arabidopsis thaliana
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The loci of perception for phytochrome control of internode growth in light-grown mustard: Promotion by low phytochrome photoequilibria in the internode is enhanced by blue light perceived by the leaves
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Anatomy, Growth and Survival of a Long-hypocotyl Mutant of Cucumis sativus Deficient in Phytochrome B
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Redundant roles of photoreceptors and cytokinins in regulating photosynthetic acclimation to canopy density
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Interaction of Brassinosteroids with Light Quality and Plant Hormones in Regulating Shoot Growth of Young Sunflower and Arabidopsis Seedlings
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Phytochrome signaling: solving the Gordian knot with microbial relatives
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Phytochrome A Enhances the Promotion of Hypocotyl Growth Caused by Reductions in Levels of Phytochrome B in Its Far-Red-Light-Absorbing Form in Light-Grown Arabidopsis thaliana
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The ‘end‐of‐day’ phytochrome control of internode elongation in mustard: kinetics, interaction with the previous fluence rate, and ecological implications
Casal, J. J., & Smith, H. (1989) · Plant Cell & Environment · doi:10.1111/j.1365-3040.1989.tb02124.x · Cited by 48
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Variation in dynamics of phytochrome A inArabidopsisecotypes and mutants
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The end‐of‐day far‐red irradiation increases gibberellin A1 content in cowpea (Vigna sinensis) epicotyls by reducing its inactivation
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Light regulation of endogenous salicylic acid levels in hypocotyls of Helianthus annuus seedlings
Kurepin, L. V., Walton, L. J., Reid, D. M., & Chinnappa, C. C. (2010) · Botany · doi:10.1139/b10-042 · Cited by 27
Phytochrome A increases tolerance to high evaporative demand
Auge, G. A., Rugnone, M. L., Cortés, L. E., González, C. V., Zarlavsky, G., Boccalandro, H. E., & Sánchez, R. A. (2012) · Physiologia Plantarum · doi:10.1111/j.1399-3054.2012.01625.x · Cited by 18

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Phytochrome B integrates light and temperature signals in Arabidopsis
Legris, M., Klose, C., Burgie, E. S., Rojas, C. C., Neme, M., Hiltbrunner, A., Wigge, P. A., Schäfer, E., Vierstra, R. D., & Casal, J. J. (2016) · Science · doi:10.1126/science.aaf5656 · Cited by 883
Self-citation
The Multifaceted Roles of HY5 in Plant Growth and Development
Gangappa, S. N., & Botto, J. F. (2016) · Molecular Plant · doi:10.1016/j.molp.2016.07.002 · Cited by 735
Cold signaling in plants: Insights into mechanisms and regulation
Guo, X., Liu, D., & Chong, K. (2018) · Journal of Integrative Plant Biology · doi:10.1111/jipb.12706 · Cited by 630
PIFs: Systems Integrators in Plant Development
Leivar, P., & Monte, E. (2014) · The Plant Cell · doi:10.1105/tpc.113.120857 · Cited by 622
“A comprehensive view of this response as well as the central role of the PIFs in this process has been covered in excellent reviews (Franklin, 2008; Casal, 2013).”
Background
A meta‐analysis of plant responses to light intensity for 70 traits ranging from molecules to whole plant performance
Poorter, H., Niinemets, Ü., Ntagkas, N., Siebenkäs, A., Mäenpää, M., Matsubara, S., & Pons, T. L. (2019) · New Phytologist · doi:10.1111/nph.15754 · Cited by 606
Light-Quality Manipulation to Control Plant Growth and Photomorphogenesis in Greenhouse Horticulture: The State of the Art and the Opportunities of Modern LED Systems
Paradiso, R., & Proietti, S. (2021) · Journal of Plant Growth Regulation · doi:10.1007/s00344-021-10337-y · Cited by 604
“These shading conditions induce a complex response defined shade avoidance, including stem and petiole elongation, lower leaf mass, stomata density and chlorophyll content per unit of leaf area, and early flowering (Casal 2013).”
Background
SAUR Proteins as Effectors of Hormonal and Environmental Signals in Plant Growth
Ren, H. Y., & Gray, W. M. (2015) · Molecular Plant · doi:10.1016/j.molp.2015.05.003 · Cited by 580
“In Arabidopsis seedlings, the most dramatic shade avoidance response is hypocotyl elongation (reviewed in Casal, 2013; de Wit et al., 2014).”
Background
The BBX family of plant transcription factors
Gangappa, S. N., & Botto, J. F. (2014) · Trends in Plant Science · doi:10.1016/j.tplants.2014.01.010 · Cited by 567
“The intimate connection between the photoreceptors pathways and shade-avoidance responses has been thoroughly reviewed recently [64].”
The shade‐avoidance syndrome: multiple signals and ecological consequences
Ballaré, C. L., & Pierik, R. (2017) · Plant Cell & Environment · doi:10.1111/pce.12914 · Cited by 547
“…reviews on this topic have been published recently and provide additional perspectives on the mechanisms and functional implications of shade-avoidance responses (Casal 2013; Ballaré 2014; Pierik & de Wit 2014; Pierik & Testerink 2014; de Wit et al. 2016a; Fraser et al. 2016; Viczian et al. 2016).”
Plant responses to red and far-red lights, applications in horticulture
Demotes‐Mainard, S., Péron, T., Corot, A., Bertheloot, J., Gourrierec, J. L., Pelleschi, S., Crespel, L., Morel, P., Huché‐Thélier, L., Boumaza, R., et al. (2015) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2015.05.010 · Cited by 574
Light-controlled flavonoid biosynthesis in fruits
Zoratti, L., Karppinen, K., Escobar, A. L., Häggman, H., & Jaakola, L. (2014) · Frontiers in Plant Science · doi:10.3389/fpls.2014.00534 · Cited by 537
“The different forms allow phytochrome to function as a biological switch, turning responses on and off enabling the detection of circadian rhythms and seasonal changes in light conditions (Reed, 1999; Casal, 2013).”
Background
Plant immunity in signal integration between biotic and abiotic stress responses
Saijo, Y., & Loo, E. P. I. (2019) · New Phytologist · doi:10.1111/nph.15989 · Cited by 493
Light signaling and plant responses to blue and UV radiations—Perspectives for applications in horticulture
Huché‐Thélier, L., Crespel, L., Gourrierec, J. L., Morel, P., Sakr, S., & Leduc, N. (2015) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2015.06.009 · Cited by 484
Molecular mechanisms underlying phytochrome-controlled morphogenesis in plants
Legris, M., Ince, Y. Ç., & Fankhauser, C. (2019) · Nature Communications · doi:10.1038/s41467-019-13045-0 · Cited by 434
Current status and recent achievements in the field of horticulture with the use of light-emitting diodes (LEDs)
Bantis, F., Smirnakou, S., Ouzounis, T., Κουκουνάρας, Α., Ntagkas, N., & Radoglou, K. M. (2018) · Scientia Horticulturae · doi:10.1016/j.scienta.2018.02.058 · Cited by 441
Rewiring of jasmonate and phytochrome B signalling uncouples plant growth-defense tradeoffs
Campos, M. L., Yoshida, Y., Major, I. T., Ferreira, D. D. O., Weraduwage, S. M., Froehlich, J. E., Johnson, B. F., Kramer, D., Jander, G., Sharkey, T. D., et al. (2016) · Nature Communications · doi:10.1038/ncomms12570 · Cited by 401
“1a) 31–33 .”
The miR156/SPL Module, a Regulatory Hub and Versatile Toolbox, Gears up Crops for Enhanced Agronomic Traits
Wang, H., & Wang, H. (2015) · Molecular Plant · doi:10.1016/j.molp.2015.01.008 · Cited by 358
UV-A radiation effects on higher plants: Exploring the known unknown
Verdaguer, D., Jansen, M. A. K., Llorens, L., Morales, L. O., & Neugart, S. (2016) · Plant Science · doi:10.1016/j.plantsci.2016.11.014 · Cited by 341
“Instead, a range of blue-light photoreceptors, such as phototropins and cryptochromes, are readily absorbed in the UV-A part of the spectrum [6] (Fig.”
Phytochrome Signaling Networks
Cheng, M., Kathare, P. K., Paik, I., & Huq, E. (2021) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-080620-024221 · Cited by 318
Light acts as a stressor and influences abiotic and biotic stress responses in plants
Roeber, V. M., Bajaj, I., Rohde, M., Schmülling, T., & Cortleven, A. (2020) · Plant Cell & Environment · doi:10.1111/pce.13948 · Cited by 312
“time, the circadian clock and gravitropism (Casal, 2013; Correll et al., 2003; Franklin & Whitelam, 2007b; Lin, 2000; Nagy & Schäfer, 2002; Pierik & de Wit, 2014; Somers, Devlin, & Kay, 1998).”
Background
Far-red radiation promotes growth of seedlings by increasing leaf expansion and whole-plant net assimilation
Park, Y., & Runkle, E. S. (2017) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2016.12.013 · Cited by 305
The Arabidopsis B-BOX Protein BBX25 Interacts with HY5, Negatively Regulating BBX22 Expression to Suppress Seedling Photomorphogenesis
Gangappa, S. N., Crocco, C. D., Johansson, H., Datta, S., Hettiarachchi, C. M., Holm, M., & Botto, J. F. (2013) · The Plant Cell · doi:10.1105/tpc.113.109751 · Cited by 283
“In Arabidopsis thaliana, red:far-red (R:FR) light is perceived by phytochromes (phyA to phyE), blue/UV-A light is perceived by cryptochromes (cry1 and cry2) and phototropins (phot1 and phot2), and UV-B is perceived by UVR8 photoreceptor (Casal, 2013).”
Background
Abscisic Acid and Gibberellins Antagonistically Mediate Plant Development and Abiotic Stress Responses
Shu, K., Zhou, W., Chen, F., Luo, X., & Yang, W. (2018) · Frontiers in Plant Science · doi:10.3389/fpls.2018.00416 · Cited by 267
“Auxin biosynthesis and signal transduction plays a key role with regard to plant shade response, and the phytochromes PHYA, PHYB, and the phytochrome-interacting factors (PIFs) are involved in these cascades (Casal, 2012, 2013; Yang et al., 2018).”
Background
The transcriptional regulator BZR1 mediates trade-off between plant innate immunity and growth
Lozano‐Durán, R., Macho, A. P., Boutrot, F., Segonzac, C., Somssich, I. E., & Zipfel, C. (2013) · eLife · doi:10.7554/elife.00983 · Cited by 245
“Dark conditions impose an energetic limitation due to lack of photo-assimilates; in this situation, the restoration of normal photosynthesis by reaching light is an essential requirement to guarantee perpetuation, and as such must be given priority (Casal, 2013).”
Background
Shaping plant architecture
Teichmann, T., & Muhr, M. (2015) · Frontiers in Plant Science · doi:10.3389/fpls.2015.00233 · Cited by 228
“Plants quantify this ratio through the phytochrome system and react with the shade avoidance syndrome that enables plants to outgrow the competitors for light (Casal, 2013; Pierik and de Wit, 2014).”
Background
The Roles of Auxin Biosynthesis YUCCA Gene Family in Plants
Cao, X., Yang, H., Shang, C., Ma, S., Liu, L., & Cheng, J. (2019) · International Journal of Molecular Sciences · doi:10.3390/ijms20246343 · Cited by 242
Effects of Continuous or End-of-Day Far-Red Light on Tomato Plant Growth, Morphology, Light Absorption, and Fruit Production
Kalaitzoglou, P., van Ieperen, W., Harbinson, J., van der Meer, M., Martinakos, S., Weerheim, K., Nicole, C. C. S., & Marcelis, L. F. M. (2019) · Frontiers in Plant Science · doi:10.3389/fpls.2019.00322 · Cited by 239
“Plants that normally grow in unshaded or lightly shaded habitats can distinguish differences in the proximity of other plants through alterations in the spectral intensity of light (Casal, 2013).”
Background
Plant Defense Responses to Biotic Stress and Its Interplay With Fluctuating Dark/Light Conditions
Iqbal, Z., Iqbal, M. S., Hashem, A., Allah, E. F. A., & Ansari, M. I. (2021) · Frontiers in Plant Science · doi:10.3389/fpls.2021.631810 · Cited by 245
“Plants exhibit SAS, which is represented by the elongation of plant parts such as hypocotyls, stems, and petioles (Casal, 2013).”
Background
Tomato fruit carotenoid biosynthesis is adjusted to actual ripening progression by a light‐dependent mechanism
Llorente, B., D’Andrea, L., Ruiz‐Sola, M. Á., Botterweg, E., Pulido, P., Andilla, J., Loza‐Álvarez, P., & Rodrı́guez-Concepción, M. (2015) · The Plant Journal · doi:10.1111/tpj.13094 · Cited by 237
“…repress carotenoid biosynthesis both in the dark and in response to a reduc- tion in the R/FR ratio, a plant proximity signal referred to as ‘shade’ that is generated due to the preferential absor- bance of R by leaves of neighboring or canopy plants (Mart ınez-Garc ıa et al., 2010; Casal, 2013).”
Background
Information Integration and Communication in Plant Growth Regulation
Chaiwanon, J., Wang, W., Zhu, J.-Y., Oh, E., & Wang, Z. (2016) · Cell · doi:10.1016/j.cell.2016.01.044 · Cited by 237
Photomorphogenic responses to ultraviolet‐B light
Jenkins, G. I. (2017) · Plant Cell & Environment · doi:10.1111/pce.12934 · Cited by 236
Perception and signalling of light and temperature cues in plants
Legris, M., Nieto, C., Sellaro, R., Prat, S., & Casal, J. J. (2016) · The Plant Journal · doi:10.1111/tpj.13467 · Cited by 225
“, 2012), after which plants become particularly sensitive to the stem growth-promoting light signals of neighbouring plants (Casal, 2013).”
InfluentialSelf-citation
Plant Strategies for Enhancing Access to Sunlight
Fiorucci, A.-S., & Fankhauser, C. (2017) · Current Biology · doi:10.1016/j.cub.2017.05.085 · Cited by 220
Diffuse solar radiation and canopy photosynthesis in a changing environment
Durand, M., Murchie, E. H., Lindfors, A. V., Urban, O., Aphalo, P. J., & Robson, T. M. (2021) · Agricultural and Forest Meteorology · doi:10.1016/j.agrformet.2021.108684 · Cited by 231
PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod
Chen, A., Li, C., Hu, W. S., Lau, M. Y., Lin, H., Rockwell, N. C., Martin, S. S., Jernstedt, J. A., Lagarias, J. C., & Dubcovsky, J. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1409795111 · Cited by 209
“Proc Natl Acad Sci USA 106(11):4555–4560.”
Background
Light Signaling, Root Development, and Plasticity
van Gelderen, K., Kang, C., & Pierik, R. (2017) · PLANT PHYSIOLOGY · doi:10.1104/pp.17.01079 · Cited by 211
“PIFs then accumulate, induce auxin biosynthesis and transport, and auxin 313 subsequently induces elongation of hypocotyls, stems and petioles as well as upward leaf 314 movement (Lorrain et al., 2008; Keuskamp et al., 2010; Keuskamp et al., 2011; Casal, 2013; 315 Gommers et al., 2013; Kohnen et al., 2016; de Wit et a…”
Background
Illuminating colors: regulation of carotenoid biosynthesis and accumulation by light
Llorente, B., Martínez‐García, J. F., Stange, C., & Rodrı́guez-Concepción, M. (2017) · Current Opinion in Plant Biology · doi:10.1016/j.pbi.2017.03.011 · Cited by 208
“, high density) plant environments are actually perceived by photoreceptors and rapidly transduced into changes in gene expression aimed to adapt to eventual shading, for example, by decreasing the production of chlorophylls and carotenoids to readjust photosynthetic metabolism [14,15].”
Background
Photosynthetic efficiency in sun and shade plants
Mathur, S., Jain, L., & Jajoo, A. (2018) · Photosynthetica · doi:10.1007/s11099-018-0767-y · Cited by 206
“Plants could sense the variation in quality and quantity of light falling on them through a network of phytohormones and thus regulate their growth accordingly (Casal 2013, Kurepin and Pheris 2014).”
Background
Maize smart-canopy architecture enhances yield at high densities
Tian, J., Wang, C., Chen, F., Qin, W., Yang, H. Y., Zhao, S., Xia, J., Du, X., Zhu, Y., Wu, L., et al. (2024) · Nature · doi:10.1038/s41586-024-07669-6 · Cited by 208
“…are adaptive changes that help individuals to outcompete their neighbours, but might affect reproductive yield under dense planting owing to reduced photoassimilate partitioning to grains, increased risk of lodging, precocious maturation and increased susceptibility to pests and diseases 17,25 .”
Influential
A PIF1/PIF3-HY5-BBX23 Transcription Factor Cascade Affects Photomorphogenesis
Zhang, X., Huai, J., Shang, F., Xu, G., Tang, W., Jing, Y., & Lin, R. (2017) · PLANT PHYSIOLOGY · doi:10.1104/pp.17.00418 · Cited by 195
“Plants perceive different wavelengths of light via a set of photoreceptors, including the red/far-red light photoreceptors, phytochromes; the blue/UB-A light photoreceptors, cryptochromes and phototropins; and the UV-B light photoreceptor UVR8 (Chen et al., 2004; Casal, 2013).”
Shade Inhibits Leaf Size by Controlling Cell Proliferation and Enlargement in Soybean
Wu, Y., Gong, W., & Yang, W. (2017) · Scientific Reports · doi:10.1038/s41598-017-10026-5 · Cited by 199
Integration of Phytochrome and Cryptochrome Signals Determines Plant Growth during Competition for Light
de Wit, M., Keuskamp, D. H., Bongers, F. J., Hornitschek, P., Gommers, C. M. M., Reinen, E., Martínez-Cerón, C., Fankhauser, C., & Pierik, R. (2016) · Current Biology · doi:10.1016/j.cub.2016.10.031 · Cited by 193
“When true shading occurs, transmitted light is especially depleted in red and blue (B) wavelengths, due to absorption by chlorophyll [4].”
Double overexpression of DREB and PIF transcription factors improves drought stress tolerance and cell elongation in transgenic plants
Kudo, M., Kidokoro, S., Yoshida, T., Mizoi, J., Todaka, D., Fernie, A. R., Shinozaki, K., & Yamaguchi‐Shinozaki, K. (2016) · Plant Biotechnology Journal · doi:10.1111/pbi.12644 · Cited by 190
“, 2012), through the up-regulation of auxin-related genes (IAAs and SAURs), shade-inducible genes (ATHB2, PIL1 and HFR1) and cell wall-related genes (XTR7) (Casal, 2013).”
BackgroundInfluential
The Art of Being Flexible: How to Escape from Shade, Salt, and Drought
Pierik, R., & Testerink, C. S. (2014) · PLANT PHYSIOLOGY · doi:10.1104/pp.114.239160 · Cited by 188
“The relative occurrence and importance of these different light signals, and their interactions at different stages of stand development, were recently reviewed (Casal, 2013; Pierik and de Wit, 2014).”
BackgroundInfluential
Eukaryotic algal phytochromes span the visible spectrum
Rockwell, N. C., Duanmu, D., Martin, S. S., Bachy, C., Price, D. C., Bhattacharya, D., Worden, A. Z., & Lagarias, J. C. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1401871111 · Cited by 187
Hormonal Regulation in Shade Avoidance
Yang, C., & Li, L. (2017) · Frontiers in Plant Science · doi:10.3389/fpls.2017.01527 · Cited by 182
“Photosynthetic pigments in leaves absorb strongly in the range of photosynthetically active radiation (PAR) (400–700 nm) and UV radiation (280–400 nm), and reflect far-red wavelength (700–800 nm) (Casal, 2013).”
Background
UVB and UVA as eustressors in horticultural and agricultural crops
Neugart, S., & Schreiner, M. (2018) · Scientia Horticulturae · doi:10.1016/j.scienta.2018.02.021 · Cited by 180
Temperature Sensing in Plants
Kerbler, S. M., & Wigge, P. A. (2023) · Annual Review of Plant Biology · doi:10.1146/annurev-arplant-102820-102235 · Cited by 179
Photoreceptor‐mediated kin recognition in plants
Crepy, M., & Casal, J. J. (2014) · New Phytologist · doi:10.1111/nph.13040 · Cited by 176
“Due to selective light absorption by photosynthetic pigments, plant canopy shade-light exhibits low red to far-red ratios (R : FR) and low blue-light irradiances (Smith, 2000; Casal, 2013).”
BackgroundSelf-citation
My body is a cage: mechanisms and modulation of plant cell growth
Braidwood, L., Breuer, C., & Sugimoto, K. (2013) · New Phytologist · doi:10.1111/nph.12473 · Cited by 171
“Perception of the light environment occurs via multiple mechanisms, including phytochromes (Casal, 2013).”
Background
PIF s get BR right: PHYTOCHROME INTERACTING FACTOR s as integrators of light and hormonal signals
de Lucas, M., & Prat, S. (2014) · New Phytologist · doi:10.1111/nph.12725 · Cited by 176
Effect of interactions between light intensity and red-to- far-red ratio on the photosynthesis of soybean leaves under shade condition
Yang, F., Feng, L., Liu, Q., Wu, X., Fan, Y., Raza, M. A., Cheng, Y., Chen, J., Wang, X., Yong, T., et al. (2018) · Environmental and Experimental Botany · doi:10.1016/j.envexpbot.2018.03.008 · Cited by 171
Neighbor Detection Induces Organ-Specific Transcriptomes, Revealing Patterns Underlying Hypocotyl-Specific Growth
Kohnen, M. V., Schmid‐Siegert, E., Trévisan, M., Petrolati, L. A., Sénéchal, F., Müller-Moulé, P., Maloof, J., Xénarios, I., & Fankhauser, C. (2016) · The Plant Cell · doi:10.1105/tpc.16.00463 · Cited by 159
“The light environment in dense vegetation is characterized by reduced PAR and hence represents a threatening situation to which plants respond with a variety of growth and developmental strategies (Casal, 2013).”
BackgroundInfluential
Control of Plant Growth and Defense by Photoreceptors: From Mechanisms to Opportunities in Agriculture
Pierik, R., & Ballaré, C. L. (2020) · Molecular Plant · doi:10.1016/j.molp.2020.11.021 · Cited by 171
Cold stress in plants: Strategies to improve cold tolerance in forage species
Adhikari, L., Baral, R., Paudel, D., Min, D., Makaju, S., Poudel, H. P., Acharya, J. P., & Missaoui, A. (2022) · Plant Stress · doi:10.1016/j.stress.2022.100081 · Cited by 165
Cotyledon-Generated Auxin Is Required for Shade-Induced Hypocotyl Growth in Brassica rapa
Procko, C., Nartey, C. M., Ljung, K., Noel, J. P., & Chory, J. (2014) · PLANT PHYSIOLOGY · doi:10.1104/pp.114.241844 · Cited by 162
“Stem elongation phenotypes may affect traits of agronomic importance in some plant species by reallocating resources toward stem growth and increasing the likelihood of mechanical damage (Morinaka et al., 2006; Casal, 2013).”
BackgroundMethodInfluential
COP1 destabilizes DELLA proteins in Arabidopsis
Blanco‐Touriñán, N., Legris, M., Minguet, E. G., Rojas, C. C., Nohales, M. A., Iniesto, E., García-León, M., Pacín, M., Heucken, N., Blomeier, T., et al. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1907969117 · Cited by 158
Self-citation
Plant Responses to Vegetation Proximity: A Whole Life Avoiding Shade
Roig‐Villanova, I., & Martínez‐García, J. F. (2016) · Frontiers in Plant Science · doi:10.3389/fpls.2016.00236 · Cited by 157
“We discuss these responses based on the knowledge about the molecular mechanisms and components with a role in regulating the SAS response of the hypocotyls of Arabidopsis thaliana.”
BackgroundInfluential
Solar ultraviolet radiation is necessary to enhance grapevine fruit ripening transcriptional and phenolic responses
Carbonell‐Bejerano, P., Diago, M. P., Martínez‐Abaigar, J., Martínez-Zapater, J. M., Tardáguila, J., & Núñez‐Olivera, E. (2014) · BMC Plant Biology · doi:10.1186/1471-2229-14-183 · Cited by 155
“Besides photoprotection, UV radiation also triggers safeguards to anticipate other stressors such as heat or drought, and mediates in developmental cues such as morphogenetic responses to shade/ light or interactions with other organisms [18-22].”
BZR1 Interacts with HY5 to Mediate Brassinosteroid- and Light-Regulated Cotyledon Opening in Arabidopsis in Darkness
Li, Q., & He, J. (2015) · Molecular Plant · doi:10.1016/j.molp.2015.08.014 · Cited by 154
“72 Light signals are perceived by at least four families of photoreceptors, including 73 phytochromes, cryptochromes, phototropins and UV Resistance Locus 8 (UVR8) 74 (Casal, 2013).”
Background
Gene-by-environment interactions in plants: Molecular mechanisms, environmental drivers, and adaptive plasticity
Napier, J. D., Heckman, R. W., & Juenger, T. E. (2023) · The Plant Cell · doi:10.1093/plcell/koac322 · Cited by 158
Neighbor detection at the leaf tip adaptively regulates upward leaf movement through spatial auxin dynamics
Pantazopoulou, C. K., Bongers, F. J., Küpers, J. J., Reinen, E., Das, D., Evers, J. B., Anten, N. P. R., & Pierik, R. (2017) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1702275114 · Cited by 152
The impact of the phytochromes on photosynthetic processes
Kreslavski, V. D., Los, D. A., Schmitt, F., Zharmukhamedov, S. K., Kuznetsov, V. V., & Allakhverdiev, S. I. (2018) · Biochimica et Biophysica Acta (BBA) - Bioenergetics · doi:10.1016/j.bbabio.2018.03.003 · Cited by 157
Putting the brakes on: abscisic acid as a central environmental regulator of stomatal development
Chater, C., Oliver, J., Casson, S. A., & Gray, J. E. (2014) · New Phytologist · doi:10.1111/nph.12713 · Cited by 151
“Recent reviews have discussed the contribution of light signalling to stomatal function and development (Shimazaki et al., 2007;Chen et al., 2012;Casal, 2013), but surprisingly little is known about the cross-talk between ABA-mediated and lightmediated control of stomatal development.”
Background
The influence of greenhouse-integrated photovoltaics on crop production
Allardyce, C. S., Fankhauser, C., Zakeeruddin, S. M., Grätzel, M., & Dyson, P. J. (2017) · Solar Energy · doi:10.1016/j.solener.2017.06.044 · Cited by 145
Light Controls Protein Localization through Phytochrome-Mediated Alternative Promoter Selection
Ushijima, T., Hanada, K., Gotoh, E., Yamori, W., Kodama, Y., Tanaka, H., Kusano, M., Fukushima, A., Tokizawa, M., Yamamoto, Y. Y., et al. (2017) · Cell · doi:10.1016/j.cell.2017.10.018 · Cited by 146
“Phytochromes are reversibly activated and inactivated by the absorption of red and far-red light, respectively, which enables plants to sense the red/far-red light ratio in theenvironment (Casal, 2013; Franklin and Quail, 2010; Galvão and Fankhauser, 2015).”
Background
Perspectives on improving light distribution and light use efficiency in crop canopies
Slattery, R. A., & Ort, D. R. (2020) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiaa006 · Cited by 157
Perception of solar UV radiation by plants: photoreceptors and mechanisms
Rai, N., Morales, L. O., & Aphalo, P. J. (2021) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiab162 · Cited by 152
“downstream of them important for whole-plant responses (Casal, 2013; Ballaré and Pierik, 2017).”
Background
LEDs Make It Resilient: Effects on Plant Growth and Defense
Lazzarin, M., Meisenburg, M., Meijer, D., van Ieperen, W., Marcelis, L. F. M., Kappers, I. F., van der Krol, A. R., van Loon, J. J. A., & Dicke, M. (2020) · Trends in Plant Science · doi:10.1016/j.tplants.2020.11.013 · Cited by 143
Effect of Light Intensity on Morphology, Photosynthesis and Carbon Metabolism of Alfalfa (Medicago sativa) Seedlings
Tang, W., Guo, H., Baskin, C. C., Xiong, W., Yang, C., Li, Z., Song, H., Wang, T., Yin, J., Wu, X., et al. (2022) · Plants · doi:10.3390/plants11131688 · Cited by 141
“The SAS is triggered by a reduction in light intensity perceived by photoreceptor cryptochromes, which in turn control adaptive responses [4].”
Background
Light intensity modulates the regulatory network of the shade avoidance response in Arabidopsis
Hersch, M., Lorrain, S., de Wit, M., Trévisan, M., Ljung, K., Bergmann, S., & Fankhauser, C. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1320355111 · Cited by 144
“Due to FR scattering, a low R:FR ratio can also occur without a decrease in light resources when a plant is surrounded by nonshading neighbors (potential future competitors for light), a feature termed neighbor detection (2).”
Background
DNA demethylation is involved in the regulation of temperature‐dependent anthocyanin accumulation in peach
Zhu, Y., Zhang, B., Allan, A. C., Lin‐Wang, K., Zhao, Y., Wang, K., Chen, K., & Xu, C. (2020) · The Plant Journal · doi:10.1111/tpj.14680 · Cited by 139
The transcriptional regulator BBX24 impairs DELLA activity to promote shade avoidance in Arabidopsis thaliana
Crocco, C. D., Locascio, A., Escudero, C. M., Alabadı́, D., Blázquez, M. A., & Botto, J. F. (2015) · Nature Communications · doi:10.1038/ncomms7202 · Cited by 136
Light Perception: A Matter of Time
Sánchez, S. E., Rugnone, M. L., & Kay, S. A. (2020) · Molecular Plant · doi:10.1016/j.molp.2020.02.006 · Cited by 136
“After R illumination, the Pr form converts to the active, far red light-absorbing form (Pfr) and translocates to the nucleus (Casal, 2013).”
Background
Light perception and signalling by phytochrome A
Casal, J. J., Candia, A. J. N., & Sellaro, R. (2013) · Journal of Experimental Botany · doi:10.1093/jxb/ert379 · Cited by 135
Self-citation
Phytochrome A Negatively Regulates the Shade Avoidance Response by Increasing Auxin/Indole Acidic Acid Protein Stability
Yang, C., Xie, F., Jiang, Y., Li, Z., Huang, X., & Li, L. (2017) · Developmental Cell · doi:10.1016/j.devcel.2017.11.017 · Cited by 133
Eyes on the future – evidence for trade‐offs between growth, storage and defense in Norway spruce
Huang, J., Hammerbacher, A., Weinhold, A., Reichelt, M., Gleixner, G., Behrendt, T., van Dam, N. M., Sala, A., Gershenzon, J., Trumbore, S. E., et al. (2018) · New Phytologist · doi:10.1111/nph.15522 · Cited by 135
UVA Radiation Is Beneficial for Yield and Quality of Indoor Cultivated Lettuce
Chen, Y., Li, T., Yang, Q., Zhang, Y., Zou, J., Bian, Z., & Wen, X. (2019) · Frontiers in Plant Science · doi:10.3389/fpls.2019.01563 · Cited by 128
“(O2−) Generation O2 generation rate was determined with the sulfamate colorimetric method of Elstner and Heupel (1976), using a commercial superoxide anion radical assay kit (Leagene Biotechnology Co.”
BackgroundMethodInfluential
Interaction of light and temperature signalling
Franklin, K. A., Toledo‐Ortiz, G., Pyott, D. E., & Halliday, K. (2014) · Journal of Experimental Botany · doi:10.1093/jxb/eru059 · Cited by 130
“Casal JJ. 2013.”
Substituting Far-Red for Traditionally Defined Photosynthetic Photons Results in Equal Canopy Quantum Yield for CO2 Fixation and Increased Photon Capture During Long-Term Studies: Implications for Re-Defining PAR
Zhen, S., & Bugbee, B. G. (2020) · Frontiers in Plant Science · doi:10.3389/fpls.2020.581156 · Cited by 129
“This selective attenuation causes the red (R) to far-red (FR) ratio to decrease in forest understories or within dense canopies compared to unfiltered sunlight (Federer and Tanner, 1966; Holmes and Smith, 1977; Casal, 2013).”
Background
Light and Plant Growth Regulators on In Vitro Proliferation
Cavallaro, V., Pellegrino, A., Muleo, R., & Forgione, I. (2022) · Plants · doi:10.3390/plants11070844 · Cited by 143
FHY3 and FAR1 Integrate Light Signals with the miR156-SPL Module-Mediated Aging Pathway to Regulate Arabidopsis Flowering
Xie, Y., Zhou, Q., Zhao, Y., Li, Q., Liu, Y., Ma, M., Wang, B., Shen, R., Zheng, Z., & Wang, H. (2020) · Molecular Plant · doi:10.1016/j.molp.2020.01.013 · Cited by 126
Marine algae and land plants share conserved phytochrome signaling systems
Duanmu, D., Bachy, C., Sudek, S., Wong, C., Jiménez, V., Rockwell, N. C., Martin, S. S., Ngan, C. Y., Reistetter, E. N., van Baren, M. J., et al. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1416751111 · Cited by 125
“, phototropin, cryptochrome, rhodopsins (29), UVR8 (30), or phytochromeindependent bilin-based sensors (27)], some of which serve overlapping functions with phytochromes in plants (1, 13), and/or the evolution of new photoacclimative systems (31).”
Background
Control of Carbon Assimilation and Partitioning by Jasmonate: An Accounting of Growth–Defense Tradeoffs
Havko, N. E., Major, I. T., Jewell, J. B., Attaran, E., Browse, J., & Howe, G. A. (2016) · Plants · doi:10.3390/plants5010007 · Cited by 128
“The shade avoidance syndrome is characterized by rapid growth of stems and petioles, which allows neighboring plants to compete for light [91].”
Background
DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis
Nassrallah, A., Rougée, M., Bourbousse, C., Drevensek, S., Fonseca, S., Iniesto, E., Aït-Mohamed, O., Deton-Cabanillas, A.-F., Zabulon, G., Ahmed, I., et al. (2018) · eLife · doi:10.7554/elife.37892 · Cited by 125
Arabidopsis FHY3 and FAR1 Regulate the Balance between Growth and Defense Responses under Shade Conditions
Liu, Y., Wei, H., Ma, M., Li, Q., Kong, D., Sun, J., Ma, X., Wang, B., Chen, C., Xie, Y., et al. (2019) · The Plant Cell · doi:10.1105/tpc.18.00991 · Cited by 125
“When grown in the canopy density with decreased R/FR ratios of daylight, plants undergo multifaceted adjustments in growth and development, known as the shade avoidance syndrome (SAS), increasing a plant’s ability to compete for light and chance of reproductive success (Franklin, 2008; Casal, 2013).”
Background
Phytochrome Signaling: Time to Tighten up the Loose Ends
Wang, H., & Wang, H. (2015) · Molecular Plant · doi:10.1016/j.molp.2014.11.021 · Cited by 129
Red Light-Mediated Degradation of CONSTANS by the E3 Ubiquitin Ligase HOS1 Regulates Photoperiodic Flowering in Arabidopsis
Lázaro, A. M. P., Mouriz, A., Piñeiro, M., & Jarillo, J. A. (2015) · The Plant Cell · doi:10.1105/tpc.15.00529 · Cited by 122
“Light quality regulates many developmental processes in plants such as flowering time, shade avoidance, hypocotyl elongation, and seed germination (Kami et al., 2010; Casal, 2013).”
BackgroundInfluential
Contrasting growth responses in lamina and petiole during neighbor detection depend on differential auxin responsiveness rather than different auxin levels
de Wit, M., Ljung, K., & Fankhauser, C. (2015) · New Phytologist · doi:10.1111/nph.13449 · Cited by 112
Phytochrome evolution in 3D: deletion, duplication, and diversification
Rockwell, N. C., & Lagarias, J. C. (2019) · New Phytologist · doi:10.1111/nph.16240 · Cited by 118
“DIVERSIFICATION: SPECIALIZED CIRCUITS AND MASTER REGULATORS Our view of phytochrome has been shaped by its importance in development and shade avoidance for crop plants such as wheat and rice, annuals that grow rapidly from small seeds under the right conditions (Mathews, 2006; Casal, 2013).”
Background
On the Developmental and Environmental Regulation of Secondary Metabolism in Vaccinium spp. Berries
Karppinen, K., Zoratti, L., Nguyen, N. T. B., Häggman, H., & Jaakola, L. (2016) · Frontiers in Plant Science · doi:10.3389/fpls.2016.00655 · Cited by 113
“B to farred (Möglich et al., 2010; Casal, 2013).”
Background
Mechanisms Underlying the Environmentally Induced Plasticity of Leaf Morphology
Fritz, M. A., Rosa, S., & Sicard, A. (2018) · Frontiers in Genetics · doi:10.3389/fgene.2018.00478 · Cited by 122
“They include phytochromes, cryptochromes, phototropins and UV RESISTANCE LOCUS (UVR8) (Casal, 2013).”
BackgroundInfluential
Carotenoid Biosynthesis and Plastid Development in Plants: The Role of Light
Quian-Ulloa, R., & Stange, C. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22031184 · Cited by 113
“On the contrary, PHYB is active only in R light participating in low-fluence response (LFR) [34,47].”
Background
Light Signaling in Bud Outgrowth and Branching in Plants
Leduc, N., Roman, H., Barbier, F. F., Péron, T., Huché‐Thélier, L., Lothier, J., Demotes‐Mainard, S., & Sakr, S. (2014) · Plants · doi:10.3390/plants3020223 · Cited by 124
“according to light conditions [147].”
Background
Light signaling controls nuclear architecture reorganization during seedling establishment
Bourbousse, C., Mestiri, I., Zabulon, G., Bourge, M., Formiggini, F., Koini, M. A., Brown, S., Fransz, P. F., Bowler, C., & Barnèche, F. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1503512112 · Cited by 111
Red Light-Regulated Reversible Nuclear Localization of Proteins in Mammalian Cells and Zebrafish
Beyer, H. M., Juillot, S., Herbst, K., Samodelov, S. L., Müller, K., Schamel, W. W. A., Römer, W., Schäfer, E., Nagy, F., Strähle, U., et al. (2015) · ACS Synthetic Biology · doi:10.1021/acssynbio.5b00004 · Cited by 111
Systematic analysis of how phytochrome B dimerization determines its specificity
Klose, C., Venezia, F., Hussong, A., Kircher, S., Schäfer, E., & Fleck, C. C. (2015) · Nature Plants · doi:10.1038/nplants.2015.90 · Cited by 110
Responses of Soybean to Selected Abiotic Stresses—Photoperiod, Temperature and Water
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Authors: Casal, J. J.
Affiliations: Consejo Nacional de Investigaciones Científicas y Técnicas (AR)
Corresponding author: Casal, Jorge J.
ORCID: Casal, Jorge J.
Venue: Annual Review of Plant Biology
Publisher: Annual Reviews
Published: 2013-04-29
Volume: 64
Issue: 1
Pages: 403-427
ISSN: 1543-5008 (ISSN-L)
1545-2123
DOI: 10.1146/annurev-arplant-050312-120221
OpenAlex: W2107201571
Cited by: 865
References: 144
Citations by year: 2026: 81 · 2025: 66 · 2024: 72 · 2023: 61 · 2022: 79 · 2021: 91 · 2020: 67 · 2019: 60 · 2018: 62 · 2017: 60 · 2016: 58 · 2015: 44 · 2014: 51 · 2013: 13
FWCI: 5.94
Type: journal article
Language: en
Open access: green
hdl.handle.net
Licence: cc-by-nc-nd
Locations: Annual Review of Plant Biology (publishedVersion)
PubMed (publishedVersion)
CONICET Digital (CONICET) (submittedVersion, cc-by-nc-nd)
Funders: Consejo Nacional de Investigaciones Científicas y Técnicas
Universidad de Buenos Aires (CONICET)
Topics: Life Sciences › Agricultural and Biological Sciences › Plant Science › Light effects on plants
Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
Keywords: shade avoidance, photoreceptors, phytochrome, cryptochrome, phototropin, UVR8, phytochrome-interacting factors, DELLA proteins, gibberellin signaling, brassinosteroid signaling, auxin biosynthesis, COP1, circadian clock, red:far-red ratio, plant light signaling, canopy light environment
MeSH terms: Gibberellins, Light, Phytochrome, Plant Growth Regulators, Plants, Signal Transduction, Ecosystem, Photoreceptors, Plant

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Photoreceptor Signaling Networks in Plant Responses to Shade

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