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LYK4, a Lysin Motif Receptor-Like Kinase, Is Important for Chitin Signaling and Plant Innate Immunity in Arabidopsis
Open accessAbstract
Chitin is commonly found in fungal cell walls and is one of the well-studied microbe/pathogen-associated molecular patterns. Previous studies showed that lysin motif (LysM)-containing proteins are essential for plant recognition of chitin, leading to the activation of plant innate immunity. In Arabidopsis (Arabidopsis thaliana), the LYK1/CERK1 (for LysM-containing receptor-like kinase1/chitin elicitor receptor kinase1) was shown to be essential for chitin recognition, whereas in rice (Oryza sativa), the LysM-containing protein, CEBiP (for chitin elicitor-binding protein), was shown to be involved in chitin recognition. Unlike LYK1/CERK1, CEBiP lacks an intracellular kinase domain. Arabidopsis possesses three CEBiP-like genes. Our data show that mutations in these genes, either singly or in combination, did not compromise the response to chitin treatment. Arabidopsis also contains five LYK genes. Analysis of mutations in LYK2, -3, -4, or -5 showed that LYK4 is also involved in chitin signaling. The lyk4 mutants showed reduced induction of chitin-responsive genes and diminished chitin-induced cytosolic calcium elevation as well as enhanced susceptibility to both the bacterial pathogen Pseudomonas syringae pv tomato DC3000 and the fungal pathogen Alternaria brassicicola, although these phenotypes were not as dramatic as that seen in the lyk1/cerk1 mutants. Similar to LYK1/CERK1, the LYK4 protein was also localized to the plasma membrane. Therefore, LYK4 may play a role in the chitin recognition receptor complex to assist chitin signal transduction and plant innate immunity.
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Citations
Cites
Floral dip: a simplified method forAgrobacterium‐mediated transformation ofArabidopsis thaliana
Clough, S. J., & Bent, A. F. (1998) · The Plant Journal · doi:10.1046/j.1365-313x.1998.00343.x · Cited by 21,934
Jones, J. D. G., & Dangl, J. L. (2006) · Nature · doi:10.1038/nature05286 · Cited by 13,177
GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.
Jefferson, R. A., Kavanagh, T. A., & Bevan, M. W. (1987) · The EMBO Journal · doi:10.1002/j.1460-2075.1987.tb02730.x · Cited by 9,844
WoLF PSORT: protein localization predictor
Horton, P., Park, K.-J., Obayashi, T., Fujita, N., Harada, H., Adams-Collier, C. J., & Nakai, K. (2007) · Nucleic Acids Research · doi:10.1093/nar/gkm259 · Cited by 4,127
Boller, T., & Felix, G. (2009) · Annual Review of Plant Biology · doi:10.1146/annurev.arplant.57.032905.105346 · Cited by 3,387
A Gateway Cloning Vector Set for High-Throughput Functional Analysis of Genes in Planta
Curtis, M. D., & Grossniklaus, U. (2003) · Plant Physiology · doi:10.1104/pp.103.027979 · Cited by 2,644
A simple and rapid method for the preparation of plant genomic DNA for PCR analysis
Edwards, K., Johnstone, C., & Thompson, C. (1991) · Nucleic Acids Research · doi:10.1093/nar/19.6.1349 · Cited by 2,615
Hanks, S. K., & Hunter, T. R. (1995) · PubMed · Cited by 2,518
The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification 1
Hanks, S. K., & Hunter, T. (1995) · The FASEB Journal · doi:10.1096/fasebj.9.8.7768349 · Cited by 2,318
Nelson, B. K., Cai, X., & Nebenführ, A. (2007) · The Plant Journal · doi:10.1111/j.1365-313x.2007.03212.x · Cited by 2,083
Bacterial disease resistance in Arabidopsis through flagellin perception
Zipfel, C., Robatzek, S., Navarro, L., Oakeley, E. J., Jones, J. D. G., Felix, G., & Boller, T. (2004) · Nature · doi:10.1038/nature02485 · Cited by 1,790
Plants have a sensitive perception system for the most conserved domain of bacterial flagellin
Felix, G., Duran, J. D., Volko, S., & Boller, T. (1999) · The Plant Journal · doi:10.1046/j.1365-313x.1999.00265.x · Cited by 1,715
CERK1, a LysM receptor kinase, is essential for chitin elicitor signaling in Arabidopsis
Miya, A., Albert, P., Shinya, T., Desaki, Y., Ichimura, K., Shirasu, K., Narusaka, Y., Kawakami, N., Kaku, H., & Shibuya, N. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0705147104 · Cited by 1,427
Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases
Radutoiu, S., Madsen, L. H., Madsen, E. B., Felle, H. H., Umehara, Y., Grønlund, M., Sato, S., Nakamura, Y., Tabata, S., Sandal, N., et al. (2003) · Nature · doi:10.1038/nature02039 · Cited by 1,221
Plant cells recognize chitin fragments for defense signaling through a plasma membrane receptor
Kaku, H., Nishizawa, Y., Ishii-Minami, N., Akimoto-Tomiyama, C., Dohmae, N., Takio, K., Minami, E., & Shibuya, N. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0508882103 · Cited by 1,166
A receptor kinase gene of the LysM type is involved in legumeperception of rhizobial signals
Madsen, E. B., Madsen, L. H., Radutoiu, S., Olbryt, M., Rakwalska, M., Szczyglowski, K., Sato, S., Kaneko, T., Tabata, S., Sandal, N., et al. (2003) · Nature · doi:10.1038/nature02045 · Cited by 1,018
Stergiopoulos, I., & de Wit, P. J. G. M. (2009) · Annual Review of Phytopathology · doi:10.1146/annurev.phyto.112408.132637 · Cited by 899
LysM Domain Receptor Kinases Regulating Rhizobial Nod Factor-Induced Infection
Limpens, E., Franken, C., Smit, P., Willemse, J., Bisseling, T., & Geurts, R. (2003) · Science · doi:10.1126/science.1090074 · Cited by 868
Wan, J., Zhang, X.-C., Neece, D., Ramonell, K. M., Clough, S., Kim, S.-Y., Stacey, M. G., & Stacey, G. (2008) · The Plant Cell · doi:10.1105/tpc.107.056754 · Cited by 798
Self-citationConserved Fungal LysM Effector Ecp6 Prevents Chitin-Triggered Immunity in Plants
de Jonge, R., Peter van Esse, H., Kombrink, A., Shinya, T., Desaki, Y., Bours, R., van der Krol, S., Shibuya, N., Joosten, M. H. A. J., & Thomma, B. P. H. J. (2010) · Science · doi:10.1126/science.1190859 · Cited by 777
Elicitors, Effectors, and R Genes: The New Paradigm and a Lifetime Supply of Questions
Bent, A. F., & Mackey, D. (2007) · Annual Review of Phytopathology · doi:10.1146/annurev.phyto.45.062806.094427 · Cited by 773
Shimizu, T., Nakano, T., Takamizawa, D., Desaki, Y., Ishii-Minami, N., Nishizawa, Y., Minami, E., Okada, K., Yamane, H., Kaku, H., et al. (2010) · The Plant Journal · doi:10.1111/j.1365-313x.2010.04324.x · Cited by 734
The Cauliflower Mosaic Virus 35 S Promoter: Combinatorial Regulation of Transcription in Plants
Benfey, P. N., & Chua, N.-H. (1990) · Science · doi:10.1126/science.250.4983.959 · Cited by 652
LysM, a widely distributed protein motif for binding to (peptido)glycans
Buist, G., Steen, A., Kok, J., & Kuipers, O. P. (2008) · Molecular Microbiology · doi:10.1111/j.1365-2958.2008.06211.x · Cited by 628
Oligosaccharide signalling for defence responses in plant
Shibuya, N., & Minami, E. (2001) · Physiological and Molecular Plant Pathology · doi:10.1006/pmpp.2001.0364 · Cited by 527
Willmann, R., Lajunen, H. M., Erbs, G., Newman, M.-A., Kolb, D., Tsuda, K., Katagiri, F., Fliegmann, J., Bono, J.-J., Cullimore, J. V., et al. (2011) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1112862108 · Cited by 524
Chitin synthesis and fungal pathogenesis
Lenardon, M. D., Munro, C. A., & Gow, N. A. (2010) · Current Opinion in Microbiology · doi:10.1016/j.mib.2010.05.002 · Cited by 502
Petutschnig, E. K., Jones, A. M. E., Serazetdinova, L., Lipka, U., & Lipka, V. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m110.116657 · Cited by 486
AvrPtoB Targets the LysM Receptor Kinase CERK1 to Promote Bacterial Virulence on Plants
Gimenez-Ibanez, S., Hann, D. R., Ntoukakis, V., Petutschnig, E., Lipka, V., & Rathjen, J. P. (2009) · Current Biology · doi:10.1016/j.cub.2009.01.054 · Cited by 466
Veronese, P., Nakagami, H., Bluhm, B., AbuQamar, S., Chen, X., Salmeron, J., Dietrich, R. A., Hirt, H., & Mengiste, T. (2005) · The Plant Cell · doi:10.1105/tpc.105.035576 · Cited by 461
van den Burg, H. A., Harrison, S. J., Joosten, M. H. A. J., Vervoort, J., & de Wit, P. J. G. M. (2006) · Molecular Plant-Microbe Interactions® · doi:10.1094/mpmi-19-1420 · Cited by 402
Radutoiu, S., Madsen, L. H., Madsen, E. B., Jurkiewicz, A., Fukai, E., Quistgaard, E. M., Albrektsen, A. S., James, E. K., Thirup, S., & Stougaard, J. (2007) · The EMBO Journal · doi:10.1038/sj.emboj.7601826 · Cited by 397
Medicago LYK3, an Entry Receptor in Rhizobial Nodulation Factor Signaling
Smit, P., Limpens, E., Geurts, R., Fedorova, E., Dolgikh, E., Gough, C., & Bisseling, T. (2007) · Plant Physiology · doi:10.1104/pp.107.100495 · Cited by 395
Llave, C., Kasschau, K. D., & Carrington, J. C. (2000) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.230334397 · Cited by 360
Liu, J., Elmore, J. M., Lin, Z.-J. D., & Coaker, G. (2011) · Cell Host & Microbe · doi:10.1016/j.chom.2011.01.010 · Cited by 334
Fungal LysM effectors: extinguishers of host immunity?
de Jonge, R., & Thomma, B. P. H. J. (2009) · Trends in Microbiology · doi:10.1016/j.tim.2009.01.002 · Cited by 256
Libault, M., Wan, J., Czechowski, T., Udvardi, M. K., & Stacey, G. S. (2007) · Molecular Plant-Microbe Interactions · doi:10.1094/mpmi-20-8-0900 · Cited by 255
Self-citationSteen, A., Buist, G., Leenhouts, K. J., Khattabi, M. E., Grijpstra, F., Zomer, A. L., Venema, G., Kuipers, O. P., & Kok, J. (2003) · Journal of Biological Chemistry · doi:10.1074/jbc.m211055200 · Cited by 248
van Wees, S. C. M., Chang, H.-S., Zhu, T., & Glazebrook, J. (2003) · Plant Physiology · doi:10.1104/pp.103.022186 · Cited by 235
Bartels, S., Anderson, J. C., González Besteiro, M. A., Carreri, A., Hirt, H., Buchala, A., Métraux, J.-P., Peck, S. C., & Ulm, R. (2009) · The Plant Cell · doi:10.1105/tpc.109.067678 · Cited by 232
Madsen, E. B., Antolín‐Llovera, M., Grossmann, C., Ye, J., Vieweg, S., Broghammer, A., Krusell, L., Radutoiu, S., Jensen, O. N., Stougaard, J., et al. (2011) · The Plant Journal · doi:10.1111/j.1365-313x.2010.04431.x · Cited by 224
Chen, L., Hamada, S., Fujiwara, M., Zhu, T., Thao, N. P., Wong, H. L., Krishna, P., Ueda, T., Kaku, H., Shibuya, N., et al. (2010) · Cell Host & Microbe · doi:10.1016/j.chom.2010.02.008 · Cited by 207
Direct Binding of a Plant LysM Receptor-like Kinase, LysM RLK1/CERK1, to Chitin in Vitro
Iizasa, E., Mitsutomi, M., & Nagano, Y. (2010) · Journal of Biological Chemistry · doi:10.1074/jbc.m109.027540 · Cited by 206
Ramonell, K., Berrocal-Lobo, M., Koh, S., Wan, J., Edwards, H., Stacey, G., & Somerville, S. (2005) · Plant Physiology · doi:10.1104/pp.105.060947 · Cited by 201
Self-citationMolecular Evolution of Lysin Motif-Type Receptor-Like Kinases in Plants
Zhang, X.-C., Wu, X., Findley, S., Wan, J., Libault, M., Nguyen, H. T., Cannon, S. B., & Stacey, G. (2007) · Plant Physiology · doi:10.1104/pp.107.097097 · Cited by 193
Self-citationMadrid, M. P., Pietro, A. D., & Roncero, M. I. G. (2002) · Molecular Microbiology · doi:10.1046/j.1365-2958.2003.03299.x · Cited by 151
Modular design of the Enterococcus hirae muramidase-2 and Streptococcus faecalis autolysin
Joris, B. (1992) · FEMS Microbiology Letters · doi:10.1016/0378-1097(92)90707-u · Cited by 149
Chitin signaling and plant disease resistance
Wan, J., Zhang, X., & Stacey, G. S. (2008) · Plant Signaling & Behavior · doi:10.4161/psb.3.10.5916 · Cited by 148
Self-citationActivation of a mitogen‐activated protein kinase pathway in Arabidopsis by chitin
Wan, J., Zhang, S., & Stacey, G. S. (2004) · Molecular Plant Pathology · doi:10.1111/j.1364-3703.2004.00215.x · Cited by 140
Self-citationEvolutionary genomics of LysM genes in land plants
Zhang, X., Cannon, S. B., & Stacey, G. S. (2009) · BMC Evolutionary Biology · doi:10.1186/1471-2148-9-183 · Cited by 139
Self-citationMichielse, C. B., van Wijk, R., Reijnen, L., Cornelissen, B. J. C., & Rep, M. (2009) · Genome biology · doi:10.1186/gb-2009-10-1-r4 · Cited by 135
Extracellular Nucleotides Elicit Cytosolic Free Calcium Oscillations in Arabidopsis
Tanaka, K., Swanson, S. J., Gilroy, S., & Stacey, G. S. (2010) · PLANT PHYSIOLOGY · doi:10.1104/pp.110.162503 · Cited by 127
Self-citationCharacterization of Early, Chitin-Induced Gene Expression in Arabidopsis
Zhang, B., Ramonell, K. M., Somerville, S. C., & Stacey, G. S. (2002) · Molecular Plant-Microbe Interactions · doi:10.1094/mpmi.2002.15.9.963 · Cited by 126
Self-citationThe LysM receptor kinase CERK1 mediates bacterial perception in Arabidopsis
Ibanez, S. G., Ntoukakis, V. E., & Rathjen, J. P. (2009) · Plant Signaling & Behavior · doi:10.4161/psb.4.6.8697 · Cited by 118
Modular design of theEnterococcus hiraemuramidase-2 andStreptococcus faecalisautolysin
Joris, B., Englebert, S., Chu, C.-P., Kariyama, R., Daneo-moore, L., Shockman, G. D., & Ghuysen, J. (1992) · FEMS Microbiology Letters · doi:10.1111/j.1574-6968.1992.tb05218.x · Cited by 116
Mulder, L., Lefebvre, B., Cullimore, J. V., & Imberty, A. (2006) · Glycobiology · doi:10.1093/glycob/cwl006 · Cited by 108
Characterization of Receptor Proteins using Affinity Cross-linking with Biotinylated Ligands
Shinya, T., Osada, T., Desaki, Y., Hatamoto, M., Yamanaka, Y., Hirano, H., Takai, R., Che, F., Kaku, H., & Shibuya, N. (2009) · Plant and Cell Physiology · doi:10.1093/pcp/pcp185 · Cited by 48
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Metadata
- Authors
- Wan, J., Tanaka, K., Zhang, X.-C., Son, G. H., Brechenmacher, L., Nguyen, T. H. N., & Stacey, G.
- Venue
- Plant Physiology
- Publisher
- Oxford University Press (OUP)
- Published
- 2012-06-28
- Volume
- 160
- Issue
- 1
- Pages
- 396-406
- ISSN
- 0032-0889 (ISSN-L)
- 1532-2548
- OpenAlex
- W2051026120
- Cited by
- 305
- References
- 57
- FWCI
- 21.56
- Type
- journal article
- Language
- en
- Open access
- hybrid
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