The DOI matches its Crossref record; 49 of the 49 references it cites were found in a registry or an index.
Arabidopsis REGULATOR OF AXILLARY MERISTEMS1 Controls a Leaf Axil Stem Cell Niche and Modulates Vegetative Development
Open accessAbstract
Shoot branching is a major determinant of variation in plant stature. Branches, which form secondary growth axes, originate from stem cells activated in leaf axils. The initial steps by which axillary meristems (AMs) are specified and their stem cells organized are still poorly understood. We identified gain- and loss-of-function alleles at the Arabidopsis thaliana REGULATOR OF AXILLARY MERISTEMS1 (RAX1) locus. RAX1 is encoded by the Myb-like transcription factor MYB37 and is an Arabidopsis homolog of the tomato (Solanum lycopersicum) Blind gene. RAX1 is transiently expressed in a small central domain within the boundary zone separating shoot apical meristem and leaf primordia early in leaf primordium development. RAX1 genetically interacts with CUP-SHAPED COTYLEDON (CUC) genes and is required for the expression of CUC2 in the RAX1 expression domain, suggesting that RAX1 acts through CUC2. We propose that RAX1 functions to positionally specify a stem cell niche for AM formation. RAX1 also affects the timing of developmental phase transitions by negatively regulating gibberellic acid levels in the shoot apex. RAX1 thus defines a novel activity that links the specification of AM formation with the modulation of the rate of progression through developmental phases.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“In addition to LAS, the MYB factors REGULATOR OF AXILLARY MERISTEMS1 (RAX1) in Arabidopsis (Keller et al., 2006), as well as BLIND (BL) and POTATO LEAF (C) in tomato (Schmitz et al., 2002; Busch et al., 2011), influence axillary meristem development.”
From Shaping plant architecture (2015) · cites this paper as Keller et al., 2006
In the citing paper
“Furthermore, a small subgroup of MYB genes, related to the tomato Blind gene, were shown to modulate axillary meristem formation along the shoot axis in tomato (Schmitz et al., 2002) and Arabidopsis (Keller et al., 2006;M€ uller et al., 2006).”
From Divide et impera: boundaries shape the plant body and initiate new meristems (2016) · cites this paper as Keller et al., 2006
In the citing paper
“Another R2R3 MYB protein, called REGULATOR OF AXILLARY MERISTEMS1 (RAX1), which is also specifically expressed in the boundary region between SAM and leaf primordia, modulates AM formation during early vegetative development in Arabidopsis (Keller et al., 2006;M€ uller et al., 2006), whereas the orthologous genes in pepper (Capsicum annuum) and tomato regulate both AM initiation and transition to”
From Divide et impera: boundaries shape the plant body and initiate new meristems (2016) · cites this paper as Keller et al., 2006
In the citing paper
“| RAX1 | Bl (tomato) | MYB | Reduced number of AMs | SAM and leaf primordia | Keller et al. (2006); M€ uller et al. |”
From Divide et impera: boundaries shape the plant body and initiate new meristems (2016) · cites this paper as Keller et al. (2006)
In the citing paper
“| RAX1 | Bl (tomato) | MYB | Reduced number of AMs | SAM and leaf primordia | Keller et al. (2006); M€ uller et al. |”
From Divide et impera: boundaries shape the plant body and initiate new meristems (2016) · cites this paper as Keller et al. (2006)
In the citing paper
“| RAX1 | Bl (tomato) | MYB | Reduced number of AMs | SAM and leaf primordia | Keller et al. (2006); M€ uller et al. |”
From Divide et impera: boundaries shape the plant body and initiate new meristems (2016) · cites this paper as Keller et al. (2006)
Citations
Cites
MrBayes 3: Bayesian phylogenetic inference under mixed models
Ronquist, F., & Huelsenbeck, J. P. (2003) · Bioinformatics · doi:10.1093/bioinformatics/btg180 · Cited by 29,194
Floral dip: a simplified method for Agrobacterium ‐mediated transformation of Arabidopsis thaliana
Clough, S. J., & Bent, A. F. (1998) · The Plant Journal · doi:10.1046/j.1365-313x.1998.00343.x · Cited by 22,014
Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana
Alonso, J. M., Stepanova, A. N., Leisse, T. J., Kim, C. J., Chen, H., Shinn, P., Stevenson, D. K., Zimmerman, J., Barajas, P., Cheuk, R., et al. (2003) · Science · doi:10.1126/science.1086391 · Cited by 5,105
The R2R3-MYB gene family in Arabidopsis thaliana
Stracke, R., Werber, M., & Weißhaar, B. (2001) · Current Opinion in Plant Biology · doi:10.1016/s1369-5266(00)00199-0 · Cited by 2,180
A member of the KNOTTED class of homeodomain proteins encoded by the STM gene of Arabidopsis
Long, J. A., Moan, E. I., Medford, J. I., & Barton, M. K. (1996) · Nature · doi:10.1038/379066a0 · Cited by 1,537
Regulation of phyllotaxis by polar auxin transport
Reinhardt, D., Pesce, E.-R., Stieger, P., Mandel, T., Baltensperger, K., Bennett, M., Traas, J., Friml, J., & Kuhlemeier, C. (2003) · Nature · doi:10.1038/nature02081 · Cited by 1,523
Liu, Y., Mitsukawa, N., Oosumi, T., & Whittier, R. F. (1995) · The Plant Journal · doi:10.1046/j.1365-313x.1995.08030457.x · Cited by 1,387
Arabidopsis , the Rosetta Stone of Flowering Time?
Simpson, G. G., & Dean, C. (2002) · Science · doi:10.1126/science.296.5566.285 · Cited by 1,047
Activation Tagging in Arabidopsis
Weigel, D., Ahn, J. H., Blázquez, M. A., Borevitz, J., Christensen, S. K., Fankhauser, C., Ferrándiz, C., Kardailsky, I. V., Malancharuvil, E. J., Neff, M. M., et al. (2000) · PLANT PHYSIOLOGY · doi:10.1104/pp.122.4.1003 · Cited by 971
Transcriptional repression by AtMYB4 controls production of UV‐protecting sunscreens in Arabidopsis
Jin, H., Cominelli, E., Bailey, P., Parr, A., Mehrtens, F., Jones, J., Tonelli, C., Weißhaar, B., & Martin, C. (2000) · The EMBO Journal · doi:10.1093/emboj/19.22.6150 · Cited by 943
Flagged first, then by citations
Research works printed but not linked: 2
- 1996, Plant Cell, 8, 155
- 1955, Phytomorphology, 5, 286
Cited by
Sorted by citations
Items 201–245 of 245
Arabidopsis as Model for Developmental Regulation and Crop Improvement
Liu, C. (2009) · Springer eBooks · doi:10.1007/978-3-642-02301-9_2 · Cited by 2
Gatz, A. (2014) · DOAJ (DOAJ: Directory of Open Access Journals) · Cited by 2
Rakesh, J. L., Nayidu, N. K., Pattar, S., Gandhadmath, S. S., Sukanth, B. S., Nayak, S. N., & Patil, B. R. (2022) · Journal of Crop Improvement · doi:10.1080/15427528.2022.2112346 · Cited by 2
PhMYB37 Promotes Shoot Branching in Petunia
Dong, L., Yang, T., Gao, D., Wang, T., & Deng, X. (2022) · Genes · doi:10.3390/genes13112064 · Cited by 2
Voronina, A. S., & Pshennikova, E. S. (2020) · Молекулярная биология · doi:10.31857/s0026898420020172 · Cited by 1
Denay, G., Tichtinsky, G., Masson, M. L., Chahtane, H., Sylvie, H., López‐Vidriero, I., Wenzl, C., Franco‐Zorrilla, J. M., Rüdiger, S., Lohmann, J. U., et al. (2018) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/488114 · Cited by 2
Kumari, P., Singh, K. P., & Rai, P. K. (2024) · Tropical Plant Biology · doi:10.1007/s12042-024-09375-z · Cited by 1
Zhou, S., Zhou, Q., Cui, Y.-D., Zhong, X., Chen, X., Lin, X.-R., Yang, Z., & Zhu, J. (2025) · Cells · doi:10.3390/cells14070470 · Cited by 1
Molecular cloning of the GhLOM and GhROX genes associated with axillary meristem formation in cotton
Dai, T. C., & Wang, Z. (2016) · Russian Journal of Plant Physiology · doi:10.1134/s1021443716030031 · Cited by 1
Zhou, W., Tan, C. L., Qi, X., Li, H., Zhao, Z., Li, X., Li, X., Zhang, X., Zhang, Y., Liu, Z., et al. (2024) · Scientia Horticulturae · doi:10.1016/j.scienta.2024.113717 · Cited by 1
Construction of RNAi Vector of NtLS Gene and its Transformation in Tobacco
WeiFeng, W., Shuaishuai, T., Wang, L., Liu, G., Li, F., Xiao-ming, G., & Yuhe, S. (2011) · Zhongguo yancao kexue · Cited by 1
Transcription Factors in Poplar Growth and Development
Brunner, A. M., & Beers, E. P. (2011) · Science Publishers eBooks · doi:10.1201/b10819-9 · Cited by 1
Komnedath, S. R. (2007) · Kölner Universitäts PublikationsServer (Universität zu Köln) · Cited by 1
Velappan, Y., Chabikwa, T. G., Considine, J. A., Agudelo‐Romero, P., Foyer, C. H., Signorelli, S., & Considine, M. J. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.02.09.430520 · Cited by 1
Shoot Branching and Plant Architecture
Bennett, T., Crawford, S. R., Ward, S. P., & Leyser, O. (2007) · Wiley eBooks · doi:10.1002/9780470015902.a0020122 · Cited by 2
Molecular cloning and expression analysis of five GhRAXs in upland cotton (Gossypium hirsutum L.)
Dai, T. C., & Wang, Z. M. (2015) · Genetics and Molecular Research · doi:10.4238/2015.october.5.25
Fernandes, J. C. (2009) · Portuguese National Funding Agency for Science, Research and Technology (RCAAP Project by FCT)
Yang, F. (2008) · Kölner Universitäts PublikationsServer (Universität zu Köln)
Hormonal Regulation of Branching in Grasses 1,2(C)
McSteen, P. (2009)
Cloning and Expression of One Anthocyanin-Related R2R3-MYB Gene in Rosa rugosa
Wang, Y., Sui, X., Zhao, M., Han, X., Zhao, L., & Xu, Z. (2018) · American Journal of Plant Sciences · doi:10.4236/ajps.2018.910147
An evolutionarily conserved mechanism for production of secondary meristems in land plantsPreprint
Yasui, Y., Tsukamoto, S., Sugaya, T., Nishihama, R., Wang, Q., Yamato, K. T., Fukaki, H., Mimura, T., Kubo, H., Theres, K., et al. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/555607
Wu, Z., Wu, J., Tao, Z., Xiu-zhu, G., Pan, X., & Yu, W. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/585364
Transcriptomic analyze of the less branches of Brassica napus L. suitable for mechanized harvesting
Qing, Y., Li, Y., & Ma, Z. (2021) · IOP Conference Series Earth and Environmental Science · doi:10.1088/1755-1315/742/1/012003
Axillary Meristem Development in Plants
Zhang, C., Liu, L., Guo, S., & Duan, B. (2022) · Current Chinese Science · doi:10.2174/2210298102666220927100443
The roles of transcription factors in the development of plant meristems
Dong, Q., & Zhang, C. (2022) · Elsevier eBooks · doi:10.1016/b978-0-323-90613-5.00008-x
Komatsu, A., Kodama, K., Mizuno, Y., Fujibayashi, M., Naramoto, S., & Kyozuka, J. (2022) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2022.11.29.518368
Komatsu, A., Fujibayashi, M., Kumagai, K., Suzuki, H., Hata, Y., Takebayashi, Y., Kojima, M., Sakakibara, H., & Kyozuka, J. (2024) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2024.09.02.610783
Li, J., Zhong, T., Xu, R., Chang, Z., Meng, Y., Rong, C., Shi, X., Ding, C., & Ding, C. (2025) · The Plant Journal · doi:10.1111/tpj.70170
Devi, J., MISHRA, G. P., Sagar, V. R., Singh, V., Dubey, R. K., Karkute, S. G., Gupta, N., Rai, N., Tripathi, K., Shivaprasad, K. M., et al. (2025) · Legume Science · doi:10.1002/leg3.70043
Cell-cycle-driven epigenetic resetting maintains meristematic cell fate for shoot branching
Guo, Y., Yang, Y., Shi, B., Wang, H., Cao, X., Peng, Z., He, Y., Xiao, J. Y., Tao, L., Wagner, D., et al. (2026) · Nature Plants · doi:10.1101/2025.10.22.683900 · Cited by 1
Wang, H., Zhang, H., Chen, Y., Wang, L., Wan, Y., Yu, H., Hou, J., Ren, Z., Cheng, Q., & Shen, H. (2025) · Plant Physiology and Biochemistry · doi:10.1016/j.plaphy.2025.110834
Carbon availability acts via cytokinins to promote gemma cup formation in Marchantia polymorphaPreprint
Humphreys, J. L., Fisher, T. J., Perez, T., Flores‐Sandoval, E., Silvestri, A., Rubio‐Somoza, I., & Barbier, F. F. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.64898/2025.12.08.692956
Hamano, K., Sato, S., Arai, M., Negishi, Y., Nakamura, T., Komatsu, T., Naragino, T., & Suzuki, S. (2021) · Figshare · doi:10.6084/m9.figshare.14691813
Hamano, K., Sato, S., Arai, M., Negishi, Y., Nakamura, T., Komatsu, T., Naragino, T., & Suzuki, S. (2021) · Figshare · doi:10.6084/m9.figshare.14691810
Hamano, K., Sato, S., Arai, M., Negishi, Y., Nakamura, T., Komatsu, T., Naragino, T., & Suzuki, S. (2021) · Figshare · doi:10.6084/m9.figshare.14691816
Li, J., Zhao, Y., ZhANG, Y., Ye, F., Hou, Z., Zhang, Y., Hao, L., Li, G., Shao, J., & Tan, M. (2023) · Figshare · doi:10.6084/m9.figshare.23529184
Chahtane, H. (2014) · theses.fr (ABES) · doi:10.70675/8b368233z92b5z424ezb6e4z96165f3238d2
Maugarny-Calès, A. (2017) · theses.fr (ABES) · doi:10.70675/a450e4dazc92cz43e6z9d73z98a77e17322a
Su, Y. H., Tang, L. P., & Zhang, X. S. (2026) · Springer eBooks · doi:10.1007/978-981-95-7033-1_2
Morgan, M., Westbrook, J. W., Dervinis, C., Quesada, T., Gezan, S. A., Sykes, R. W., Johnson, T. S., Madrid, G., Lane, M. J., Townsend, A., et al. (2026) · New Phytologist · doi:10.1111/nph.71134
OsMYB8–OsARF12/25 module fine-tunes tiller angle via auxin signaling pathway in rice
Fang, Y., Xu, C., Gu, H., Tan, Q., Gou, Y., Li, Y., Ding, W., Wang, H., Shen, R., & Heng, Y. (2026) · PLANT PHYSIOLOGY · doi:10.1093/plphys/kiag618
Developmental and Regulatory Framework of Shoot Branching in Plants
Yue, L., Liu, S., & Yu, S. (2026) · Plants · doi:10.3390/plants15203151
Wu, S. (2012) · eScholarship (California Digital Library)
Metadata
- Authors
- Keller, T., Abbott, J., Moritz, T., & Doerner, P.
- Affiliations
- University of Edinburgh (GB)
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, SE-90187 Umeå, Sweden
- ORCID
- Doerner, Peter
- Venue
- The Plant Cell
- Publisher
- Oxford University Press (OUP)
- Published
- 2006-02-10
- Volume
- 18
- Issue
- 3
- Pages
- 598-611
- ISSN
- 1040-4651 (ISSN-L)
- 1532-298X
- PMC
- PMC1383636
- OpenAlex
- W2103870230
- Cited by
- 245
- References
- 49
- Citations by year
- 2026: 6 · 2025: 21 · 2024: 11 · 2023: 15 · 2022: 26 · 2021: 15 · 2020: 11 · 2019: 11 · 2018: 6 · 2017: 9 · 2016: 15 · 2015: 21 · 2014: 10 · 2013: 10 · 2012: 10
- FWCI
- 12.31
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Licence
- academic.oup.com/journals/pages/open_access/funder_policies/chorus/standard_publication_model (vor)
- Locations
- The Plant Cell (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Biotechnology and Biological Sciences Research Council
- Topics
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Molecular Biology Research
- Life Sciences › Agricultural and Biological Sciences › Plant Science › Plant Parasitism and Resistance
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Keywords
- axillary meristem, shoot branching, shoot apical meristem, CUC2, gibberellin, plant height, Arabidopsis thaliana
- MeSH terms
- Alleles, Gibberellins, Molecular Sequence Data, Mutation, Phylogeny, Stem Cells, Transcription Factors, Biomarkers, Transcriptional Activation, Arabidopsis, Gene Expression Regulation, Plant, Plant Leaves, Meristem, Gene Dosage, Proto-Oncogene Proteins c-myb, Arabidopsis Proteins
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review