The DOI matches its Crossref record; 23 of the 23 references it cites were found in a registry or an index.
Analysis of Flanking Sequences from Dissociation Insertion Lines: A Database for Reverse Genetics in Arabidopsis
Open accessAbstract
We have generated Dissociation (Ds) element insertions throughout the Arabidopsis genome as a means of random mutagenesis. Here, we present the molecular analysis of genomic sequences that flank the Ds insertions of 931 independent transposant lines. Flanking sequences from 511 lines proved to be identical or homologous to DNA or protein sequences in public databases, and disruptions within known or putative genes were indicated for 354 lines. Because a significant portion (45%) of the insertions occurred within sequences defined by GenBank BAC and P1 clones, we were able to assess the distribution of Ds insertions throughout the genome. We discovered a significant preference for Ds transposition to the regions adjacent to nucleolus organizer regions on chromosomes 2 and 4. Otherwise, the mapped insertions appeared to be evenly dispersed throughout the genome. For any given gene, insertions preferentially occurred at the 5′ end, although disruption was clearly possible at any intragenic position. The insertion sites of >500 lines that could be characterized by reference to public databases are presented in a tabular format at http://www.plantcell.org/cgi/content/full/11/12/2263/DC1. This database should be of value to researchers using reverse genetics approaches to determine gene function.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Basic local alignment search tool
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., & Lipman, D. J. (1990) · Journal of Molecular Biology · doi:10.1006/jmbi.1990.9999 · Cited by 98,669
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
Altschul, S. (1997) · Nucleic Acids Research · doi:10.1093/nar/25.17.3389 · Cited by 73,302
Liu, Y., Mitsukawa, N., Oosumi, T., & Whittier, R. F. (1995) · The Plant Journal · doi:10.1046/j.1365-313x.1995.08030457.x · Cited by 1,386
Liu, Y.-G., & Whittier, R. F. (1995) · Genomics · doi:10.1016/0888-7543(95)80010-j · Cited by 1,123
Maternal Control of Embryogenesis by MEDEA , a Polycomb Group Gene in Arabidopsis
Grossniklaus, U., Vielle-Calzada, J.-P., Hoeppner, M. A., & Gagliano, W. B. (1998) · Science · doi:10.1126/science.280.5362.446 · Cited by 849
Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana
The EU Arabidopsis Genome Project, Bevan, M., Bancroft, I., Bent, E., Love, K., Goodman, H., Dean, C., Bergkamp, R., Dirkse, W., Van Staveren, M., et al. (1998) · Nature · doi:10.1038/35140 · Cited by 825
Sundaresan, V, Springer, P., Volpe, T., Haward, S., Jones, J. D., Dean, C., Ma, H., & Martienssen, R. (1995) · Genes & Development · doi:10.1101/gad.9.14.1797 · Cited by 720
Self-citationSpradling, A. C., Stern, D. M., Kiss, I., Roote, J., Laverty, T., & Rubin, G. M. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.24.10824 · Cited by 468
Disruption and sequence identification of 2,000 genes in mouse embryonic stem cells
Zambrowicz, B. P., Friedrich, G. A., Buxton, E. C., Lilleberg, S. L., Person, C., & Sands, A. T. (1998) · Nature · doi:10.1038/33423 · Cited by 436
Tissier, A. F., Marillonnet, S., Klimyuk, V., Patel, K., Torres, M. A., Murphy, G., & Jones, J. D. G. (1999) · The Plant Cell · doi:10.1105/tpc.11.10.1841 · Cited by 364
Cited by
Radial Patterning of Arabidopsis Shoots by Class III HD-ZIP and KANADI Genes
Emery, J. F., Floyd, S. K., Alvarez, J., Eshed, Y., Hawker, N. P., Izhaki, A., Baum, S. F., & Bowman, J. L. (2003) · Current Biology · doi:10.1016/j.cub.2003.09.035 · Cited by 1,143
A High-Throughput Arabidopsis Reverse Genetics System
Sessions, A., Burke, E., Presting, G., Aux, G., McElver, J., Patton, D., Dietrich, B., Ho, P., Bacwaden, J., Ko, C., et al. (2002) · The Plant Cell · doi:10.1105/tpc.004630 · Cited by 961
Prigge, M. J., Otsuga, D., Alonso, J. M., Ecker, J. R., Drews, G. N., & Clark, S. E. (2005) · The Plant Cell · doi:10.1105/tpc.104.026161 · Cited by 788
The CUP-SHAPED COTYLEDON3 Gene Is Required for Boundary and Shoot Meristem Formation in Arabidopsis
Vroemen, C. W., Mordhorst, A. P., Albrecht, C., Kwaaitaal, M. A. C. J., & de Vries, S. C. (2003) · The Plant Cell · doi:10.1105/tpc.012203 · Cited by 480
Genomic Analysis of the Nitrate Response Using a Nitrate Reductase-Null Mutant of Arabidopsis
Wang, R., Tischner, R., Gutiérrez, R. A., Hoffman, M., Xing, X., Chen, M., Coruzzi, G., & Crawford, N. M. (2004) · Plant Physiology · doi:10.1104/pp.104.044610 · Cited by 448
Metadata
- Authors
- Parinov, S., Sevugan, M., Ye, D., Yang, W.-C., Kumaran, M., & Sundaresan, V.
- Venue
- The Plant Cell
- Publisher
- Oxford University Press (OUP)
- Published
- 1999-12-01
- Volume
- 11
- Issue
- 12
- Pages
- 2263-2270
- ISSN
- 1040-4651 (ISSN-L)
- 1532-298X
- OpenAlex
- W2115094987
- Cited by
- 309
- References
- 23
- FWCI
- 34.07
- Type
- journal article
- Language
- en
- Open access
- bronze
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review
How to cite
Cite CoChat for the checks on this page, and the paper for its own findings.
- This page
- CoChat. (2026). Citation check: Analysis of Flanking Sequences from Dissociation Insertion Lines: A Database for Reverse Genetics in Arabidopsis. https://app.cochat.ai/papers/10.1105/tpc.11.12.2263
- The paper
- Parinov, S., Sevugan, M., Ye, D., Yang, W.-C., Kumaran, M., & Sundaresan, V. (1999). Analysis of Flanking Sequences from Dissociation Insertion Lines: A Database for Reverse Genetics in Arabidopsis. The Plant Cell. https://doi.org/10.1105/tpc.11.12.2263
Data sources
Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
